KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:57:55 2014 Check: 00 .. Name: ENSP00000469029/1-896 Len: 983 Check: 393 Weight: 1.00 Name: ENSBTAP00000047002/1-821 Len: 983 Check: 4118 Weight: 1.00 Name: ENSTTRP00000007889/1-976 Len: 983 Check: 7962 Weight: 1.00 Name: bmy_17413T0/1-916 Len: 983 Check: 6939 Weight: 1.00 Name: BACU002064/1-892 Len: 983 Check: 4610 Weight: 1.00 // 1 50 ENSP00000469029/1-896 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000047002/1-821 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000007889/1-976 TPRKGWASSK EKSWTELERG SRDTNGDFTE RHFEIQIGWD GXXXXXXXXX bmy_17413T0/1-916 MEKREKPPEI EIAPTEVK-- ---------- -------GW- ---------- BACU002064/1-892 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000469029/1-896 ---------- ---------- ---------- -------MTE ESEETVLYIE ENSBTAP00000047002/1-821 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000007889/1-976 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XQGLAAVMTE ESEETVLYIE bmy_17413T0/1-916 ---------- ---------- ---------- ------VMTE ESEETVLYIE BACU002064/1-892 ---------- ---------- ---------- -------MTE ESEETVLYIE 101 150 ENSP00000469029/1-896 HRYVCSECNQ LYGSLEEVLM HQNSHVPQQH FELVGVADPG VTVATDTASG ENSBTAP00000047002/1-821 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000007889/1-976 HRYVCSECNQ LYGSLEEVLM HQNSHVPQQH FELVGVADPG VTVATEAASG bmy_17413T0/1-916 HRYVCSECNQ LYGSLEEVLM HQNSHVPQQH FELVGVADPG VTVATEAASG BACU002064/1-892 HRYVCSECNQ LYGSLEEVLM HQNSHVPQQH FELVGVADPG VTVATEAASG 151 200 ENSP00000469029/1-896 TGLYQTLVQE SQYQCLECGQ LLMSPSQLLE HQELHLKMMA PQEAVPAEPS ENSBTAP00000047002/1-821 ---------- --XQCLECGQ LLMSPSQLLE HQELHLKMMA PQEAVPAEPP ENSTTRP00000007889/1-976 TGLYQTLVQE SQYQCLECGQ LLMSPSQLLE HQELHLKMMA PQEAAPAEPP bmy_17413T0/1-916 TGLYQTLVQE SQYQCLECGQ LLMSPSQLLE HQELHLKMMA PQEAAPAEPA BACU002064/1-892 TGLYQTLVQE SQYQCLECGQ LLMSPSQLLE HQELHLKMMA PQEAAPAEPT 201 250 ENSP00000469029/1-896 PKAPPLSSST IHYECVDCKA LFASQELWLN HRQTHLRATP TKAPAPVVLG ENSBTAP00000047002/1-821 PKAPALSSST IHYECVDCKA LFASQELWLN HRQTHLRATP TKPPTPVVLG ENSTTRP00000007889/1-976 PKAPPLSAST IHYECVDCKA LFASQELWLN HRQTHLRATP TKPPAPVVLG bmy_17413T0/1-916 PKVPPLSAST IHYECVDCKA LFASQELWLN HRQTHLRATP TKPPAPVVLG BACU002064/1-892 PKAPPLSAST IHYECVDCKA LFASQELWLN HRQTHLRATP TKPPAPVVLG 251 300 ENSP00000469029/1-896 SPVVLGPPVG QARVAVEHSY RKAEEGGEGA TVPSAAATTT EVVTEVELLL ENSBTAP00000047002/1-821 SPVVVGSPVG QTRVAVEHSY RKAEEGGEGA AVPSAAATTT EVVTEVELLL ENSTTRP00000007889/1-976 SPVVLGSPVG QARVAVEHSY RKA-EGGEGA AVPSAAA-TT -VVTE-ELLL bmy_17413T0/1-916 SPVVLGSPVG QARVAVEHSY RKAEEGGEGA AVPSAAA-TT EVVTEVELLL BACU002064/1-892 SPVVLGSPVG QARVAVEHSY RKAEEGGEGA AVPSAAA-TT EVVTEVELLL 301 350 ENSP00000469029/1-896 YKCSECSQLF QLPADFLEHQ ATHFPAPVPE SQEPALQQEV QASSPAEVPV ENSBTAP00000047002/1-821 YKCSECSQLF QLPADFLEHQ ATHFPAPAPE SEEPVLQQET LTPAPVEVPV ENSTTRP00000007889/1-976 YKCSECSQLF QLPGDFLEHQ ATHFPAPAPE SEEPALQQET LTPSPAEVPV bmy_17413T0/1-916 YKCSECSQLF QLPGDFLEHQ ATHFPAPAPE SEEPALQQET LTPSPAEVPV BACU002064/1-892 YKCSECSQLF QLPGDFLEHQ ATHFPAPAPE SEEPALQQET LTPSPAEVPV 351 400 ENSP00000469029/1-896 SQPDPLPASD HSYELRNGEA IGRDRRGRRA RRNNSGEAGG AATQELFCSA ENSBTAP00000047002/1-821 SQPEPVPSSD HSYELRNGEA LGRDRRGRRA RRNNSGEPGG AATQELFCSA ENSTTRP00000007889/1-976 SQPDPLPSSD HSYELRNGEA IGRDRRGRRA RRNNSGEPGG AATQELFCSA bmy_17413T0/1-916 SQPDSLPSSD HSYELRNGEA IGRDRRGRRA RRNNSGEPGG AATQELFCSA BACU002064/1-892 SQPDPLPSSD HSYELRNGEA IGRDRRGRRA RRNNSGEPGG AATQELFCSA 401 450 ENSP00000469029/1-896 CDQLFLSPHQ LQQHLRSHRE GVFKCPLCSR VFPSPSSLDQ HLGDHSSESH ENSBTAP00000047002/1-821 CDQLFLSPHQ LQQHLRSHRE GVFKCPLCSR VFPSPSSLDQ HLGDHSSESH ENSTTRP00000007889/1-976 CDQLFLSPHQ LQQHLRSHRE GVFKCPLCSR VFPSPSSLDQ HLGDHSSESH bmy_17413T0/1-916 CDQLFLSPHQ LQQHLRSHRE GVFKCPLCSR VFPSPSSLDQ HLGDHSSESH BACU002064/1-892 CDQLFLSPHQ LQQHLRSHRE GVFKCPLCSR VFPSPSSLDQ HLGDHSSESH 451 500 ENSP00000469029/1-896 FLCVDCGLAF GTEALLLAHR RAHTPNPLHS CPCGKTFVNL TKFLYHRRTH ENSBTAP00000047002/1-821 FLCVDCGLAF GTEALLLAHR RAHTPNPLHS CPCGKTFVNL TKFLYHRRTH ENSTTRP00000007889/1-976 FLCVDCGLAF GTEALLLAHR RAHTPNPLHS CPCGKTFVNL TKFLYHRRTH bmy_17413T0/1-916 FLCVDCGLAF GTEALLLAHR RAHTPNPLHS CPCGKTFVNL TKFLYHRRTH BACU002064/1-892 FLCVDCGLAF GTEALLLAHR RAHTPNPLHS CPCGKTFVNL TKFLYHRRTH 501 550 ENSP00000469029/1-896 GVGGVPLPTT PVPPEEPVIG FPEPAPAETG EPEAPEPPVS EETSAGPAAP ENSBTAP00000047002/1-821 GVGGVPLPTT PVPPEEPVLG FPEPAPAETG EPEAPEPPVA EESSAEPAAP ENSTTRP00000007889/1-976 GVGGVPLPTT PVPPEEPVIG FPEPAPAETG EPEAPEPPAA -ESPA-PAAP bmy_17413T0/1-916 GVGGVPLPTT PVPPEEPVIG FPEPAPAETG EPEAPEPPAA EESPAGPAAP BACU002064/1-892 GVGGVPLPTT PVPPEEPVIG FPEPAPAETG EPEAPEPPAA EESPAGPAAP 551 600 ENSP00000469029/1-896 GTYRCLLCSR EFGKALQLTR HQRFVHRLER RHKCSICGKM FKKKSHVRNH ENSBTAP00000047002/1-821 GTYRCLLCSR EFGKALQLTR HQRFVHRLER RHKCSICGKM FKKKSHVRNH ENSTTRP00000007889/1-976 GTY-CLLCSR EFGKALQLTR HQRFVHRLER RHKCSICGKM FKKKSHVRNH bmy_17413T0/1-916 GTYRCLLCSR EFGKALQLTR HQRFVHRLER RHKCSICGKM FKKKSHVRNH BACU002064/1-892 GTYRCLLCSR EFGKALQLTR HQRFVHRLER RHKCSICGKM FKKKSHVRNH 601 650 ENSP00000469029/1-896 LRTHTGERPF PCPDCSKPFN SPANLARHRL THTGERPYRC GDCGKAFTQS ENSBTAP00000047002/1-821 LRTHTGERPF PCPDCSKPFN SPANLARHRL THTGERPYRC GDCGKAFTQS ENSTTRP00000007889/1-976 LRTHTGERPF PCPDCSKPFN SPANLARHRL THTGERPYRC GDCGKAFTQS bmy_17413T0/1-916 LRTHTGERPF PCPDCSKPFN SPANLARHRL THTGERPYRC GDCGKAFTQS BACU002064/1-892 LRTHTGERPF PCPDCSKPFN SPANLARHRL THTGERPYRC GDCGKAFTQS 651 700 ENSP00000469029/1-896 STLRQHRLVH AQHFPYRCQE CGVRFHRPYR LLMHRYHHTG EYPYKCRECP ENSBTAP00000047002/1-821 STLRQHRLVH AQHFPYRCQE CGVRFHRPYR LLMHRYHHTG EYPYKCRECP ENSTTRP00000007889/1-976 STLRQHRLVH AQHFPYRCQE CGVRFHRPYR LLMHRYHHTG EYPYKCRECP bmy_17413T0/1-916 STLRQHRLVH AQHFPYRCQE CGVRFHRPYR LLMHRYHHTG EYPYKCRECP BACU002064/1-892 STLRQHRLVH AQHFPYRCQE CGVRFHRPYR LLMHRYHHTG EYPYKCRECP 701 750 ENSP00000469029/1-896 RSFLLRRLLE VHQLVVHAGR QPHRCPSCGA AFPSSLRLRE HRCAAAAAQA ENSBTAP00000047002/1-821 RSFLLRRLLE VHQLVAHAGR QPHRCSSCGA AFPSSLRLRE HRCAAAAAQA ENSTTRP00000007889/1-976 RSFLLRRLLE VHQLVAHAGR QPHRCSSCGA AFPSSLRLHE HRCAAAAAQA bmy_17413T0/1-916 RSFLLRRLLE VHQLVAHAGR QPHRCSSCGA AFPSSLRLHE HRCAAAAAQA BACU002064/1-892 RSFLLRRLLE VHQLVAHAGR QPHRCSSCGA AFPSSLRLHE HRCAAAAAQA 751 800 ENSP00000469029/1-896 PRRFECGTCG KKVGSAARLQ AHEAAHAAAG PGEVLAKEPP APRAPRATRA ENSBTAP00000047002/1-821 PRRFECGTCG KKVGSAARLQ AHEAAHAAAG PGEVLAKEPP APRAPRAART ENSTTRP00000007889/1-976 PRRFECGTCG KKVGSAARLQ AHEAAHAAAG PGEVLAKEPP APRAPRAART bmy_17413T0/1-916 PRRFECGTCG KKVGSAARLQ AHEAAHAAAG PGEVLAKEPP APRAPRAART BACU002064/1-892 PRRFECGTCG KKVGSAARLQ AHEAAHAAAG PGEVLAKEPP APRAPRAARA 801 850 ENSP00000469029/1-896 PVASPAALGS TATASPAAPA RRRGLECSEC KKLFSTETSL QVHRRIHTGE ENSBTAP00000047002/1-821 PITSPTTLGS AAPAAPAAPA RRRGLECSEC KKLFSTETSL QVHRRIHTGE ENSTTRP00000007889/1-976 PVASPTTLGG MAPAAPAAPA RRRGLECSEC KKLFSTETSL QVHRRIHTGE bmy_17413T0/1-916 PVASPTTLGG MAPAAPAAPA RRRGLECSEC KKLFSTETSL QVHRRIHTGE BACU002064/1-892 PVASPTTLGG MA---PAAPA RRRGLECSEC KKLFSTETSL QVHRRIHTGE 851 900 ENSP00000469029/1-896 RPYPCPDCGK AFRQSTHLKD HRRLHTGERP FACEVCGKAF AISMRLAEHR ENSBTAP00000047002/1-821 RPYPCPDCGK AFRQSTHLKD HRRLHTGERP FACEVCGKAF AISMRLAEHR ENSTTRP00000007889/1-976 RPYPCPDCGK AFRQSTHLKD HRRLHTGERP FACEVCGKAF AISMRLAEHR bmy_17413T0/1-916 RPYPCPDCGK AFRQSTHLKD HRRLHTGERP FACEVCGKAF AISMRLAEHR BACU002064/1-892 RPYPCPDCGK AFRQSTHLKD HRRLHTGERP FACEVCGKAF AISMRLAEHR 901 950 ENSP00000469029/1-896 RIHTGERPYS CPDCGKSYRS FSNLWKHRKT HQQQHQAAVR QQLAEAEAAV ENSBTAP00000047002/1-821 RIHTGERPYS CPDCGKSYRS FSNLWKHRKT HQQQHQAAVR QQLAEAEAAV ENSTTRP00000007889/1-976 RIHTGERPYS CPDCGKSYRS FSNLWKHRKT HQQQHQAAVR QQLAEAEAAV bmy_17413T0/1-916 RIHTGERPYS CPDCGKSYRS FSNLWKHRKT HQQQHQAAVR QQLAEAEAAV BACU002064/1-892 RIHTGERPYS CPDCGKSYRS FSNLWKHRKT HQQQHQAAVR QQLAEAEAAV 951 1000 ENSP00000469029/1-896 GLAVMETAVE ALPLVEAIEI YPLAEAEGVQ ISG ENSBTAP00000047002/1-821 GLAVMETAVE ALPLVEAIEI YPLAEAEGVQ ISG ENSTTRP00000007889/1-976 GLAVMETAVE ALPLVEAIEI YPLAEAEGVQ ISG bmy_17413T0/1-916 GLAVMETAVE ALPLVEAIEI YPLAEAEGVQ ISG BACU002064/1-892 GLAVMETAVE ALPLVEAIEI YPLAEAEGVQ ISG