KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:57:57 2014 Check: 00 .. Name: ENSTTRP00000000041/1-600 Len: 638 Check: 2209 Weight: 1.00 Name: ENSBTAP00000047024/1-591 Len: 638 Check: 1262 Weight: 1.00 Name: ENSP00000302108/1-598 Len: 638 Check: 1578 Weight: 1.00 Name: BACU007881/1-396 Len: 638 Check: 2447 Weight: 1.00 Name: bmy_21179T0/1-361 Len: 638 Check: 4129 Weight: 1.00 // 1 50 ENSTTRP00000000041/1-600 MLKLGGGGGG GGQDWACSVA GTGLGGEEAA FEVARLRDPG KAGCRGPGRG ENSBTAP00000047024/1-591 MLKL--GG-- GGQDWACSVA GTGLGGEEAS FEVARLGQRG KAGSGGPGWG ENSP00000302108/1-598 MLKLVGGG-- GGQDWACSVA GTSLGGEEAA FEVARPGDQG KAGGGSPGWG BACU007881/1-396 ---------- ---------- ---------- ---------- ---------- bmy_21179T0/1-361 ---------- ---------- ---------- ---------- ---------- 51 100 ENSTTRP00000000041/1-600 CAGIPDSAPG VGMLHAGAGG PARGGXXXXX XXXXXXXXXX XXXXXXXXXX ENSBTAP00000047024/1-591 CAGIPNSAPG AGMLQAGAGG PALEGQGVEE VGTPEGGGEE RPARHPPAPA ENSP00000302108/1-598 CAGIPDSAPG AGVLQAGAVG PARGGQGAEE VGESAGGGEE RRVRHPQAPA BACU007881/1-396 ---------- ---------- ---------- ---------- ---------- bmy_21179T0/1-361 ---------- ---------- ---------- ---------- ---------- 101 150 ENSTTRP00000000041/1-600 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSBTAP00000047024/1-591 LRLLNRKPQG GSGEIKTSEN DLQRGRLSRG PRAAPPASGM GDHGGQPERS ENSP00000302108/1-598 LRLLNRKPQG GSGEIKTPEN DLQRGRLSRG PRTAPPAPGM GDRSGQQERS BACU007881/1-396 ---------- ---------- ---------- ---------- ---------- bmy_21179T0/1-361 ---------- ---------- ---------- ---------- ---------- 151 200 ENSTTRP00000000041/1-600 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSBTAP00000047024/1-591 APHAPGTPAG VGAAAVNGLL HNGFH----- PSRLCSRGPP GGGDAAPPRL ENSP00000302108/1-598 VPHSPGAPVG TSAAAVNGLL HNGFHPPPVQ PPHVCSRGPV GGSDAAPQRL BACU007881/1-396 ---------- ---------- ---------- ---------- ---------- bmy_21179T0/1-361 ---------- ---------- ---------- ---------- ---------- 201 250 ENSTTRP00000000041/1-600 XXXXXXXXXX XXXXXXXXXX XXXXXRRMDS GRKNRPXXXX XXXXXXXXXX ENSBTAP00000047024/1-591 PLQPELQPQP PPPQHDSPAK KCRLRRRMDS GRKNRPPFPW FGMDIGGTLV ENSP00000302108/1-598 PLLPELQPQP LLPQHDSPAK KCRLRRRMDS GRKNRPPFPW FGMDIGGTLV BACU007881/1-396 ---------- ---------- ---------- ---------- --MDIGGTLV bmy_21179T0/1-361 ---------- ---------- ---------- ---------- --MDIGGTLV 251 300 ENSTTRP00000000041/1-600 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSBTAP00000047024/1-591 KLVYFEPKDI TAEEEQEEVE NLKSIRKYLT SNTAYGKTGI RDVHLELKNL ENSP00000302108/1-598 KLVYFEPKDI TAEEEQEEVE NLKSIRKYLT SNTAYGKTGI RDVHLELKNL BACU007881/1-396 KLVYFEPKDI TAEEEQEEVE NLKSIRKYLT SNTAYGKTGI RDVHLELKNL bmy_21179T0/1-361 KLVYFEPKDI TAEEEQEEVE NLKSIRKYLT SNTAYGKTGI RDVHLELKNL 301 350 ENSTTRP00000000041/1-600 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSBTAP00000047024/1-591 TMCGRKGNLH FIRFPSCAMH KFIQMGSEKN FSSLHTTLCA TGGGAFKFEE ENSP00000302108/1-598 TMCGRKGNLH FIRFPSCAMH RFIQMGSEKN FSSLHTTLCA TGGGAFKFEE BACU007881/1-396 TMCGRKGNLH FIRFPSCAMH RFIQMGSEKN FSSLHTSLCA TGGGAFKFEE bmy_21179T0/1-361 TMCGRKGNLH FIRFPSCAMH RFIQMGSEKN FSSLHTTLCA TGGGAFKFEE 351 400 ENSTTRP00000000041/1-600 XXXXIADLQL HKLDELDCLI QGLLYVDSVG FNGKPECYYF ENPTNPELCQ ENSBTAP00000047024/1-591 DFRTIADLQL HKLDELDCLI QGLLYVDSIG FNGKPECYYF ENPTNPELCQ ENSP00000302108/1-598 DFRMIADLQL HKLDELDCLI QGLLYVDSVG FNGKPECYYF ENPTNPELCQ BACU007881/1-396 DFRTIADLQL HKLDELDCLI QGLLYVDSIG FNGKPECYYF ENPTNPELCQ bmy_21179T0/1-361 DFRTIADLQL HKLDELDCLI QGLLYVDSVG FNGKPECYYF ENPTNPELCQ 401 450 ENSTTRP00000000041/1-600 KRPYCLDNPY PMLLVNMGSG VSILAVYSKD NYKRVTGTSL GGGTFLGLCC ENSBTAP00000047024/1-591 KKPYCLDNPY PMLLVNMGSG VSILAVYSKD NYKRVTGTSL GGGTFLGLCC ENSP00000302108/1-598 KKPYCLDNPY PMLLVNMGSG VSILAVYSKD NYKRVTGTSL GGGTFLGLCC BACU007881/1-396 KRPYCLDNPY PMLLVNMGSG VSILAVYSKD NYKRVTGTSL GGGTFLGLCC bmy_21179T0/1-361 KRPYCLDNPY PMLLVNMGSG VSILAVYSKD NYKRVTGTSL GGGTFLGLCC 451 500 ENSTTRP00000000041/1-600 LLTGCETFEE ALEMAAKGDS TNVDKLVKDI YGGDYERFGL QGSAVASSFG ENSBTAP00000047024/1-591 LLTGCETFEE ALEMAAKGDS TNVDKLVKDI YGGDYERFGL QGSAVASSFG ENSP00000302108/1-598 LLTGCETFEE ALEMAAKGDS TNVDKLVKDI YGGDYERFGL QGSAVASSFG BACU007881/1-396 LLTGCETFEE ALEMAAKGDS TNVDKLVKDI YGGDYERFGL QGSAVASSFG bmy_21179T0/1-361 LLTGCETFEE ALEMAAKGDS TNVDKLVKDI YGGDYERFGL QGSAVASSFG 501 550 ENSTTRP00000000041/1-600 NMMSKEKRDS ISKEDLARAT LVTITNNIGS IARMCALNEN IDRVVFVGNF ENSBTAP00000047024/1-591 NMMSKEKRDS ISKEDLARAT LVTITNNIGS IARMCALNEN IDRVVFVGNF ENSP00000302108/1-598 NMMSKEKRDS ISKEDLARAT LVTITNNIGS IARMCALNEN IDRVVFVGNF BACU007881/1-396 NMMSKEKRDS ISKEDLARAT LVTITNNIGS IARMCALNEN IDRVVFVGNF bmy_21179T0/1-361 NMMSKEKRDS ISKEDLARAT LVTITNNIGS IARMCALNEN IDRVVFVGNF 551 600 ENSTTRP00000000041/1-600 LRINMVSMKL LAYAMDFWSK GQLKALFLEH EG---YFGAV GALLEL---- ENSBTAP00000047024/1-591 LRINMVSMKL LAYAMDFWSK GQLKALFLEH EG---YFGAV GALLEL---- ENSP00000302108/1-598 LRINMVSMKL LAYAMDFWSK GQLKALFLEH EG---YFGAV GALLEL---- BACU007881/1-396 LRINMVSMKL LAYAMDFWSK GQLKALFLEH ECCKREFGSN DGVLHFNSGE bmy_21179T0/1-361 LRINMVSMKL LAYAMDFWSK GQLKALFLEH EGSTELVRDA NSEIMT---- 601 650 ENSTTRP00000000041/1-600 ---------- ---------- ---------- FKMTDDQ- ENSBTAP00000047024/1-591 ---------- ---------- ---------- FKMPDDQ- ENSP00000302108/1-598 ---------- ---------- ---------- FKMTDDK- BACU007881/1-396 ISFDHSIGSD LAPDEEGGLV TEKTFNILPN LRFCDSKN bmy_21179T0/1-361 ---------- ---------- ---------- LKMCAAV-