KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:57:58 2014 Check: 00 .. Name: ENSP00000264735/1-273 Len: 274 Check: 7909 Weight: 1.00 Name: ENSBTAP00000047043/1-161 Len: 274 Check: 5938 Weight: 1.00 Name: BACU016505/1-215 Len: 274 Check: 5754 Weight: 1.00 Name: bmy_17074T0/1-221 Len: 274 Check: 1898 Weight: 1.00 Name: ENSTTRP00000004166/1-169 Len: 274 Check: 5079 Weight: 1.00 // 1 50 ENSP00000264735/1-273 MVRASCRLGS ARTPSPARRP PGVRASQSRG GAAGTVSAWR RWCWRWPWRT ENSBTAP00000047043/1-161 ---------- ---------- ---------- ---------- ---------- BACU016505/1-215 ----MNFPTF QVVPLLHQPP CTVLGIGNEE SDSGVQCAWV ---------- bmy_17074T0/1-221 ---------- ---------- -----MSVNN DISGVQCAWV ---------- ENSTTRP00000004166/1-169 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000264735/1-273 APSDGWRLPP GCLPGTDGVV PRPPAARSAA ARPRETPGHT QLPPGARRRP ENSBTAP00000047043/1-161 ---------- ---------- ---------- -MPGYQTGHS SEPGTC---V BACU016505/1-215 ---------- -----CTAQF STRKKGPVSY SMPEYLTGHS SEPGTC---V bmy_17074T0/1-221 ---------- -----CTAQF STRKKGPVSY SMPEYLTGHS SEPGTC---V ENSTTRP00000004166/1-169 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000264735/1-273 RLESEMAFND CFSLNYPGNP CPGDLIEVFR PGYQHWALYL GDGYVINIAP ENSBTAP00000047043/1-161 CLKHRMAFND CFSLSYPGNP RPGDLIEVFR PCYQHWALYL GDGYVINIAP BACU016505/1-215 RLKHRMAFND CFSLNYPGNP QPGDLIEVFR PGYQHWALYL GDGYVINITP bmy_17074T0/1-221 RLKHRMAFND CFSLNYPGNP QPGDLIEVFR PGYQHWALYL GDGYVINIAP ENSTTRP00000004166/1-169 -----VAFND CFSLNYPGNP QPGDLIEVFR PGYQHWALYL GDGYVINIAP 151 200 ENSP00000264735/1-273 V-DGIPASFT SAKSVFSSKA LVKMQLLKDV VGNDTYRINN KYDETYPPLP ENSBTAP00000047043/1-161 LEDGISPSFT SAKSLFSRKA LVKMQLLKDV VGKDTYRINN KYDDTYPPLP BACU016505/1-215 LDDGISTSFT SAKSVFSRKA LVKMQLLKDV VGNDTYRINN KYDETYPPLP bmy_17074T0/1-221 LDDGISASFT SAKSVFSRKA LVKMQLLKDV VGNDTYRINN KYDETYPPLP ENSTTRP00000004166/1-169 LDDGISASFT SAKSVFSRKA LVKMQLLKDV VGNDTYRINN KYDGTYPPLP 201 250 ENSP00000264735/1-273 VEEIIKRSEF VIGQEVAYNL LVNNCEHFVT LLRYGEGVSE QANRAISTVE ENSBTAP00000047043/1-161 VEEVIQRSEF VIGQEVEYDI LVNNCEHFVT LLRYGEGVSE QV-------- BACU016505/1-215 VEEVMQRSEF VAGQEVEYDL FVNNCEHFVT LLRYGEGVSE QV--LMKTV- bmy_17074T0/1-221 VEEVMQRSEF VAGQEVEYDL FVNNCEHFVT LLRYGEGVSE QANRAISTIG ENSTTRP00000004166/1-169 VEEVMQRSEF VAGQEVEYDL LVNNCEHFVT LLRYGEGVXX XANRAISTIG 251 300 ENSP00000264735/1-273 FVTAAVGVFS FLGLFPKGQR AKYY ENSBTAP00000047043/1-161 ---------S FL-------- ---- BACU016505/1-215 ---------- ---------- ---- bmy_17074T0/1-221 FVTAAAGAFS LLGLFPKRLR AKYY ENSTTRP00000004166/1-169 FVAAAAGAFS FLGLFPKRLR AKYY