KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:57:59 2014 Check: 00 .. Name: ENSP00000370526/1-589 Len: 601 Check: 6133 Weight: 1.00 Name: ENSBTAP00000047083/1-583 Len: 601 Check: 7084 Weight: 1.00 Name: ENSTTRP00000007441/1-589 Len: 601 Check: 3937 Weight: 1.00 Name: bmy_14410T0/1-305 Len: 601 Check: 9893 Weight: 1.00 Name: BACU005060/1-505 Len: 601 Check: 8593 Weight: 1.00 // 1 50 ENSP00000370526/1-589 ---------- MLHLHHSCLC FRSWLPAMLA VLLSLAPSAS SDISASRPNI ENSBTAP00000047083/1-583 ---------- MLRLEHS--- -WSWLALALA VLLGAKPSAC GPPPGPRPNI ENSTTRP00000007441/1-589 ---------- MLHLEHSCLF FRSWLALTVS VLLDLKPSAC RSLSGSRPNI bmy_14410T0/1-305 ---------- MIG------- ---------- ---------- ---------- BACU005060/1-505 MQKKYKERED MLHLEHS--- ---W------ ---------- ---------- 51 100 ENSP00000370526/1-589 LLLMADDLGI GDIGCYGNNT MRTPNIDRLA EDGVKLTQHI SAASLCTPSR ENSBTAP00000047083/1-583 LLLMADDLGI GDVGCYGNTT IRTPNIDRLA ADGVRLTQHL AAAPLCTPSR ENSTTRP00000007441/1-589 LLLMADDLGI GDVGCYGNDT IRTPNVDRLA ADGVMLTQHI AAASVCTPSR bmy_14410T0/1-305 ---------- ---------- ---------- ---------- ---------- BACU005060/1-505 ---------- ---------- --TPNIDGLA ADGLMLTQHI AAASVCTPSR 101 150 ENSP00000370526/1-589 AAFLTGRYPV RSGMVSSIGY RVLQWTGASG GLPTNETTFA KILKEKGYAT ENSBTAP00000047083/1-583 AAFLTGRYPL RSGMVSSQGL RVLQWTAVSG GLPPSEITFA KILKAKGYTT ENSTTRP00000007441/1-589 AAFLTGRYPL RSGMVSSNGY RVLQWTGVSG GLPPNETTFA KILKDKGYAT bmy_14410T0/1-305 --------PL ---------- ---------- ---------- ----SRVHTS BACU005060/1-505 AAFLTGRYPL RSGMVSSNGY RVLQWTGVSG GLPPNETTFA KILKDKGYAT 151 200 ENSP00000370526/1-589 GLIGKWHLGL NCESASDHCH HPLHHGFDHF YGMPFSLMGD CARWELSEKR ENSBTAP00000047083/1-583 GLIGKWHLGL SCASPDDHCH HPLNHGFDHF YGMPFSMMAD CERWELSEKR ENSTTRP00000007441/1-589 GLIGKWHLGL NCESSDDYCH HPLSHGFDHF YGMPFSMMGD CEPGEVS-KR bmy_14410T0/1-305 CLSGKWHLGL NCESSDDYCH HPLSHGFDHF YGMPFSMMGD CEPWELSEKR BACU005060/1-505 GLIGKWHLGL NCESSNDYCH HPLSHGFDHF YGMPFSMMGD CEPWEMSEKR 201 250 ENSP00000370526/1-589 VNLEQKLNFL FQVLALVALT LVAGKLTHLI PVS-WMPVIW SALSAVLLLA ENSBTAP00000047083/1-583 AVLESRLDVC FQLVALATLT LTIGKLTHLI PGASWTLVIW SAVVCLLLFA ENSTTRP00000007441/1-589 AGLQHKLNVC SHVMALAAFT LTAGKLTRLV AGS-WTLVIC SAIVVLLCLT bmy_14410T0/1-305 AGLEHKLNVC SHVMALAAFT LTVGKLTRLV AGS-WTLVIC SAIVALLFFT BACU005060/1-505 AGLEHKLNAC SHVMALAAFT LAVGKLTRLI AGS-WTLVIC SAIVALLFFT 251 300 ENSP00000370526/1-589 SSYFVGALIV HADCFLMRNH TITEQPMCFQ RTTPLILQEV ASFLKRNKHG ENSBTAP00000047083/1-583 TSCLVGALIM HADCFLMRNH SIAEQPMRSQ RTTPLMLQEV SSFIKRHKQG ENSTTRP00000007441/1-589 TSHFMGAXXX XXDCFLMRNH AITEQPMSLQ RTTALMLKEV SSFVKRNKQG bmy_14410T0/1-305 TSYFMGALII HADCFLMRDH SITEQPMCLQ RTTALMLKEV SSFVQRNKQG BACU005060/1-505 TSYFVGALIV HADCFLMRNQ SITEQPMCLQ RTMALMLKEV SSFVQRNKQG 301 350 ENSP00000370526/1-589 PFLLFVSFLH VHIPLITMEN FLGKSLHGLY GDNVEEMDWM VGRILDTLDV ENSBTAP00000047083/1-583 PFLLFVSFLH VHTPLVTTEN FRGRSPHGLY GDNTEEMDWM VGQILETLDT ENSTTRP00000007441/1-589 PFLLFVSFLH VHTPLITTEN FRGRSPHGLY GDNTEEMDWM VGQILDTLDT bmy_14410T0/1-305 PFLLFVSFLH VHTPLITTEN FRGRSPHGLY GDNIEEMDWM VGQILDTLDT BACU005060/1-505 PFLLFVSFLH VHTPLITTEN FRGRSPHGLY GDNIEEMDWM VGQILDTLDT 351 400 ENSP00000370526/1-589 EGLSNSTLIY FTSDHGGSLE NQLGNTQYGG WNGIYKGGKG MGGWEGGIRV ENSBTAP00000047083/1-583 EGLTNSTLVY FTSDHGGSLE ARFGNNQYGG WNGIYKGGKG MAGWEGGIRV ENSTTRP00000007441/1-589 EGLTNSTLVY FTSDHGGSLE AQFGNHQYGG WNGIYKGGKG MGGWEGGIRV bmy_14410T0/1-305 EGLTNSTLVY FTSDHGGSLE AQFGNNQYGG WNGIYKGGKG MGGWEGGIRV BACU005060/1-505 EGLTNSTLVY FTSDHGGSLE AQFGNNQYGG WNGIYKGGKG MGGWEGGIRV 401 450 ENSP00000370526/1-589 PGIFRWPGVL PAGRVIGEPT SLMDVFPTVV RLAGGEVPQD RVIDGQDLLP ENSBTAP00000047083/1-583 PGIFRWPGVL PAGRVIHEPT SLMDIFPTVV HLAGGQVPQD RVVDGRDLLA ENSTTRP00000007441/1-589 PGILRWPGVL PAGRLIHEPT SLMDVFPTVV QLGGGQVPHD XXXXXXXXXX bmy_14410T0/1-305 PGILRWPGVL PAGRVIHEPT SLMDVFPTVV QLGGGQVPHD SS-------- BACU005060/1-505 PGILRWPGVL PAGRVIHEPT SLMDVFPTVV QLGGGQVPHD RVIDGRDLLP 451 500 ENSP00000370526/1-589 LLLGTAQHSD HEFLMHYCER FLHAARWHQR DRGTMWKVHF VTPVFQPEGA ENSBTAP00000047083/1-583 LLQGTARHSD HEFLMHYCES FLHAARWHQR D---LWKVHF TTPIFQPDGA ENSTTRP00000007441/1-589 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXGAVWKVHY VTPVFHPDGA bmy_14410T0/1-305 ---------- ---------- ---------- ---------- ---------- BACU005060/1-505 LLLGTAQHSG HEFLMHYCES FLHAARWQQ- -----WNIDH PV-VIGREFY 501 550 ENSP00000370526/1-589 GACYGRKVCP CFGEKVVHHD PPLLFDLSRD PSETHILTPA SEPVFYQVME ENSBTAP00000047083/1-583 GACYGQIVCP CSGNRVTHHA PPLLFDLSRD PSEAHALTPD TEPSFHQVVE ENSTTRP00000007441/1-589 GACYGRGVCP CSGDKVAHHD PPLLFDLSRD PSEAHALTPD TESSFHEVME bmy_14410T0/1-305 ---------- ---------- ---------- ---------- ---------- BACU005060/1-505 GLGYGYGF-- ---------- ---------- --------PV PQP--HEVVE 551 600 ENSP00000370526/1-589 RVQQAVWEHQ RTLSPVPLQL DRLGNIWRPW LQPCCGPFPL CWCLREDDPQ ENSBTAP00000047083/1-583 TVARAVAAHR QTLIPVPLQL DAADNTWKPW LQPCCGRFPF CWCDRDADPR ENSTTRP00000007441/1-589 RITKAVEDHR RTLSPVPLQL DMPDNLWKPW LQPCCGRFPL CWCDREADPQ bmy_14410T0/1-305 ---------- ---------- ---------W IY-------- ---------- BACU005060/1-505 RITKAVEDHR RTLSPVPLQL DMPNNIWKPW LQPCCGRFPL CWCDREADP- 601 650 ENSP00000370526/1-589 - ENSBTAP00000047083/1-583 - ENSTTRP00000007441/1-589 E bmy_14410T0/1-305 - BACU005060/1-505 -