KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:58:06 2014 Check: 00 .. Name: bmy_02604T0/1-691 Len: 922 Check: 1734 Weight: 1.00 Name: ENSTTRP00000007317/1-901 Len: 922 Check: 376 Weight: 1.00 Name: ENSP00000473001/1-891 Len: 922 Check: 1222 Weight: 1.00 Name: ENSBTAP00000047176/1-889 Len: 922 Check: 1599 Weight: 1.00 // 1 50 bmy_02604T0/1-691 ---------- ------MSYF GEYFWGEKNH GFEVLYHSVK QGPISTKELA ENSTTRP00000007317/1-901 DRHQTGPSGV SIEAIRMSYF GEYFWGEKNH GFEVLYHSVK QGPISTKELA ENSP00000473001/1-891 ---------- ------MSYF GEHFWGEKNH GFEVLYHSVK QGPISTKELA ENSBTAP00000047176/1-889 ---------- ------MSYF GEYFWGEKNH GFEVLYHTVK QGPISTKELA 51 100 bmy_02604T0/1-691 DFIRERT--- ---------- ---------- --FAPLWEVF RVSSDKLALC ENSTTRP00000007317/1-901 DFIRERATIE ETYSKAMAKL SKLASNGTSV GTFAPLWEVF RVSSDKLALC ENSP00000473001/1-891 DFIRERATIE ETYSKAMAKL SKLASNGTPM GTFAPLWEVF RVSSDKLALC ENSBTAP00000047176/1-889 DFIRERATIE ETYSKAMAKL SKLASNGTPM GTFAPLWEVF RVSSDKLALC 101 150 bmy_02604T0/1-691 HLELTRKLQD LIKDVLRYGE EQLKAQKKCK EEAVGTLDAV QVLAGVSQLL ENSTTRP00000007317/1-901 HLELTRKLQD LIKDVLRYGE EQLKAHKKCK EEAVGTLDAV QVLAGVSQLL ENSP00000473001/1-891 HLELTRKLQD LIKDVLRYGE EQLKTHKKCK EEVVSTLDAV QVLSGVSQLL ENSBTAP00000047176/1-889 HLELTRKLQD LIKDVLRHGE EQLKAHKKCK EEAVGTLDAI QVLTGVSQLL 151 200 bmy_02604T0/1-691 PKSRENYLNR CMDQERLRRE STSQKEMDKA ETKTKKAAES LRRSVEKYNS ENSTTRP00000007317/1-901 PKSRENYLNR CMDQERLRRE STSQKEMDKX XXXXXXXXXX XXXXXXXXXX ENSP00000473001/1-891 PKSRENYLNR CMDQERLRRE STSQKEMDKA ETKTKKAAES LRRSVEKYNS ENSBTAP00000047176/1-889 PKSRENYLNR CMDQERLRRE STSQKEMDKA ETKTRKAAES LRRLVEKYNS 201 250 bmy_02604T0/1-691 ARADFEQKML DSAL------ ---------- ---------- -------VHE ENSTTRP00000007317/1-901 XXXXXXXXXX XXXXRFQAME ETHLRQMKAL LGSYAHSVED THVQIGQVHE ENSP00000473001/1-891 ARADFEQKML DSALRFQAME ETHLRHMKAL LGSYAHSVED THVQIGQVHE ENSBTAP00000047176/1-889 ARSDFEQKML DSALRFQAME ETHLRQMKAL MGSYAHSVED THVQIGQVHE 251 300 bmy_02604T0/1-691 EFKQNIENIS VEMLLRKFAE SKGTGQEK-- P--------- ------AVKR ENSTTRP00000007317/1-901 EFKQNIENIS VEMLLRKFAE SKGTGQEK-- PGPLDFEAYS AAALQEAMKR ENSP00000473001/1-891 EFKQNIENVS VEMLLRKFAE SKGTGREK-- PGPLDFEAYS AAALQEAMKR ENSBTAP00000047176/1-889 EFKQNVENIS VEMLLRKFAE SKGTGQEKPV PGPLDFEAYR TATLQEAMKR 301 350 bmy_02604T0/1-691 LRGAKAFRLP GLSRRER--E PPAAV----- ---------- ---------- ENSTTRP00000007317/1-901 LRGAKAFRLP GLSRRER--E PPAAVDSLEP DSGXXXXXXX XXXXXXXXXX ENSP00000473001/1-891 LRGAKAFRLP GLSRREREPE PPAAVDFLEP DSGTCPEVDE EGFTVRPDVT ENSBTAP00000047176/1-889 LRGAKAFRLP GLSRRER--E PPTAVDSLEP DLGTCPEVDE EGFTVRPDVT 351 400 bmy_02604T0/1-691 -ARTAEPSRF SSSDSDFDDE EPRKFYVHIK PAQARAPTCS PEAAAAQLRA ENSTTRP00000007317/1-901 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXAAAAQLRA ENSP00000473001/1-891 QNSTAEPSRF SSSDSDFDDE EPRKFYVHIK PAPARAPACS PEAAAAQLRA ENSBTAP00000047176/1-889 QNSTAESTHF SSSDSDFDDE EPRKIYVHIK PASARAPPCS PKAAAAQLKA 401 450 bmy_02604T0/1-691 TAGSLILPPG PGA-LAVLAS PPAPRLSLPR RPRTWRTPAW THRPTRHPAP ENSTTRP00000007317/1-901 TAGS-ILPPG PGG-MKRHSS RDTA--GKLQ RPRS--APRA GSCAEKLPSD ENSP00000473001/1-891 TAGSLILPPG PGGTMKRHSS RDAA--GKPQ RPRS--APRT SSCAERLQSE ENSBTAP00000047176/1-889 TAGSLILPPG PGGTMKRHSS RDTP--GRPQ RPQS--APRA SSCVEKLQSD 451 500 bmy_02604T0/1-691 PRIPGFPARA PHRAHLPVGC RPQSRGGRSP CCHQTHHSPL HHPRVP---- ENSTTRP00000007317/1-901 EQV----SKN LFGPPLESAF DHEDFTGSSS LGFTSSPSPF SSSSPENVED ENSP00000473001/1-891 EQV----SKN LFGPPLESAF DHEDFTGSSS LGFTSSPSPF SSSSPENVED ENSBTAP00000047176/1-889 EQA----SKN LFGPTLESAL DHEDFTGSSS LGFTSSPSPF SSSSPENVED 501 550 bmy_02604T0/1-691 GGQGGPGSPT PETSLQESIL SPHAQQRGPV S-FPEPLPTG LFSPQQHPRT ENSTTRP00000007317/1-901 SGLDSPSHVA PGPSPDSWVP RPGTPQSPPT CRVPPPESRG TQPLLPSDSP ENSP00000473001/1-891 SGLDSPSHAA PGPSPDSWVP RPGTPQSPPS CRAPPPEARG IRAPPLPDSP ENSBTAP00000047176/1-889 SGLDSPSHAA PGPSPDSWVP RPGTPQSPPT CRVSPPESRG TQSLLPSDSP 551 600 bmy_02604T0/1-691 AQLLIPGRTW YVGPL----W VSVSPSLVRV CGLVTQWRPC RQRAGSGAWD ENSTTRP00000007317/1-901 QPLAPSPGPW GVEAVAGGDL MPVPADLAAR EGLAAPPRRP RSRKASCPLM ENSP00000473001/1-891 QPLASSPGPW GLEALAGGDL MPAPADPTAR EGLAAPPRRL RSRKVSCPLT ENSBTAP00000047176/1-889 HPLAASPSPW GPEAVAGGDL MPVPADLAVR EGLAAPSRRP RSRKASCPLM 601 650 bmy_02604T0/1-691 RCS------- ----LGLSLV PSLPPP---- -----GVSRG PSPVVLGSQD ENSTTRP00000007317/1-901 RSNGDLSRSL SPSPLGSSAP STIPERPSFS SQTGHGVSRG PSPVVLGSQD ENSP00000473001/1-891 RSNGDLSRSL SPSPLGSSAA STALERPSFL SQTGHGVSRG PSPVVLGSQD ENSBTAP00000047176/1-889 RSNGDLSRSL SPSPLGSSAP SSIPERPSFA SQTGHGVSRG PSPVVLGSQD 651 700 bmy_02604T0/1-691 ALPVATAFTE YVHAYFRGHN PSCLARVTGE LTMTFPAGIV RVFSGTPPPP ENSTTRP00000007317/1-901 ALPVATAFTE YVHAYFRGHN PSCLARVTGE LTMTFPAGIV RVFSGTPPPP ENSP00000473001/1-891 ALPIATAFTE YVHAYFRGHS PSCLARVTGE LTMTFPAGIV RVFSGTPPPP ENSBTAP00000047176/1-889 ALPVATAFTE YVHAYFRGHS PSCLARVTGE LTMTFPAGIV RVFSGTPPPP 701 750 bmy_02604T0/1-691 VLSFRLVGCW RPLGRHLPRV GVIIPGLCSD PSQSDPETKD FWLNMAALTE ENSTTRP00000007317/1-901 VLSFRLVHT- APIEHFHPNA DLLF----SD PSQSDPETKD FWLNMAALTE ENSP00000473001/1-891 VLSFRLVHT- TAIEHFQPNA DLLF----SD PSQSDPETKD FWLNMAALTE ENSBTAP00000047176/1-889 VLSFRLVHT- APIEHFQPNA DLLF----SD PSQSDPETKD FWLNMATLTE 751 800 bmy_02604T0/1-691 ALQRQAEQNP AASYYNVVLL RYQFSRPGAQ SVPLQLSTHW QCGATLTQVS ENSTTRP00000007317/1-901 ALQRQAEQNP AASYYNVVLL RYQFSRPGPQ SVPLQLSTHW QCGATLTQVS ENSP00000473001/1-891 ALQRQAEQNP TASYYNVVLL RYQFSRPGPQ SVPLQLSAHW QCGATLTQVS ENSBTAP00000047176/1-889 TLQRQAEQNP AASYYNVVLL RYQFSRPGPQ SMPLQLSAHW QCGPTLTQVS 801 850 bmy_02604T0/1-691 VEYSYRPGAT AVPTPLTNVQ ILLPVGEPVT NVRLQPAATW ---------- ENSTTRP00000007317/1-901 VEYCYRPGVT AVSTPLTNVQ ILLPIGEPVT NVRLQPAATW NLEEKRLLWK ENSP00000473001/1-891 VEYGYRPGAT AVPTPLTNVQ ILLPVGEPVT NVRLQPAATW NLEEKRLTWR ENSBTAP00000047176/1-889 VEYSYQPGAT TVPTPLTNVQ ILLPVGEPVT NVRLQPAATW NLEEKRLLWK 851 900 bmy_02604T0/1-691 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000007317/1-901 LPDVSETGGS GRLSASWEPR SGPSTPSPVA AQFTSEGATL SGVDLELVGS ENSP00000473001/1-891 LPDVSEAGGS GRLSASWEPL SGPSTPSPVA AQFTSEGTTL SGVDLELVGS ENSBTAP00000047176/1-889 LPDVSEAGGS GRLSASWEPC SGPSTPSPVA AQFTSEGATL SGVDLELVGS 901 950 bmy_02604T0/1-691 ---------- ---------- -- ENSTTRP00000007317/1-901 GYRMSLVKRR FATGMYLVSC -- ENSP00000473001/1-891 GYRMSLVKRR FATAAPPQGC TW ENSBTAP00000047176/1-889 GYRMSLVKRR FATGKYLVSC --