KEY:
    ENSP* - Homo sapiens (Human)
    ENSBTA* - Bos taurus (Cow)
    ENSTTR* - Tursiops truncatus (Dolphin)
    bmy_* - Balaena mysticetus (Bowhead whale)
    BACU* - Balaenoptera acutorostrata (Minke whale)

Copy from below the line for a valid .msf file.

----------------------------------------------------------------------------------
                
NoName   MSF: 4  Type: P  Thu May 15 17:58:07 2014  Check: 00 ..

 Name: ENSP00000331734/1-190     Len:    190  Check:  3935  Weight:  1.00
 Name: ENSBTAP00000047195/1-179  Len:    190  Check:  176  Weight:  1.00
 Name: bmy_08864T0/1-182         Len:    190  Check:  4192  Weight:  1.00
 Name: ENSTTRP00000007289/1-182  Len:    190  Check:  5342  Weight:  1.00

//


                          1                                                   50
ENSP00000331734/1-190     MEPEAAAGAR KARGRGCHCP GDAPWRPPPP RGPESPAPWR PWIQTPGDAE 
ENSBTAP00000047195/1-179  MRPEAAAGAP EERGRVCHCV GDGPRGPPAP RGPESQTPWR PWTLTPQEAE 
bmy_08864T0/1-182         MRPEAAAGAR EARGRVSHCP GDGPRGPPPP RGPESQTPWR PWILTPQDAD 
ENSTTRP00000007289/1-182  MRPEAAAGAR EARGRVCHCP GDGPRGPPPP RGPESQTPWR PWILTPQDAD 


                          51                                                 100
ENSP00000331734/1-190     LTRTGRPLEP RADQHTFGSK GAFGFQHPVR VYLPMSKRQE YLRSSGEQVL 
ENSBTAP00000047195/1-179  PTRTGSELEP AGDQETFGSK GAFGFQHPVR LYLPISKRQE YLQSSGEKVL 
bmy_08864T0/1-182         PTRAGSQLEP GCDQQTFGSK GAFGFQHPVR LYLPISKRQE YLQSSGEKVL 
ENSTTRP00000007289/1-182  PTRTGSELEP GCDQQTFGSK GAFGFQHPVR LYLPISKRQE YLQSSGEKVL 


                          101                                                150
ENSP00000331734/1-190     ASFPVQATID FYDDESTESA SEAEEPEEGP PPLHLLPQEV GGRQENGPGG 
ENSBTAP00000047195/1-179  ASFPVQATIH FYNDESESE- ---EELEEDT QLSALQREEV ----ADGSER 
bmy_08864T0/1-182         ASFPVQATIH FYNDESNSD- ---EEQDQEV QPSBLQCQEA ----QDGPGG 
ENSTTRP00000007289/1-182  ASFPVQATIH FYNDESNSD- ---EEHDQEV QPSDLQRQEA ----QDSPGG 


                          151                                                200
ENSP00000331734/1-190     KGRDQGINQG QRSSGGGDHW GEGPLPQGVS SRGGKCSSSK 
ENSBTAP00000047195/1-179  KARDGAANPA RRPGG---LD GKGPPPDADS PEAAACPSCV 
bmy_08864T0/1-182         KGRDQLTNPG WHPGGCGGLG GKGPLPYPDS LEDAGCSASK 
ENSTTRP00000007289/1-182  KGRDRLTNPG WRPGGCGGLG GKGPLPYPDS LEDAACPSSK