KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:58:07 2014 Check: 00 .. Name: bmy_20451T0/1-277 Len: 518 Check: 3192 Weight: 1.00 Name: ENSBTAP00000047201/1-412 Len: 518 Check: 921 Weight: 1.00 Name: ENSTTRP00000003458/1-489 Len: 518 Check: 7119 Weight: 1.00 Name: BACU016933/1-440 Len: 518 Check: 3094 Weight: 1.00 // 1 50 bmy_20451T0/1-277 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000047201/1-412 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000003458/1-489 MIKLGICSAA GYWKAACSIT DVHRMPYFAR LILFLFCLMV LVETRKPKKR BACU016933/1-440 --------MV GWAK------ ---------- ---------- ---------- 51 100 bmy_20451T0/1-277 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000047201/1-412 ---------- ---------- ---------- ---------- -------GPA ENSTTRP00000003458/1-489 RWTGQLETSK PSHLYKKNLD VTKIRKGKPQ PLLRVDDHDF TMRPAFGGPA BACU016933/1-440 ---------- -SHLYKKNLD VTKIRKGKPQ PLLRVDDHDF TMRPAFGGPA 101 150 bmy_20451T0/1-277 ---------- ---------- ---MTLYLRH YWKDERLVFP STSNKSMTFD ENSBTAP00000047201/1-412 IPVGVDVQVE SLDSISEVDM DFTMTLYLRH YWKDERLAFP SASNKSMTFD ENSTTRP00000003458/1-489 IPVGVDVQVE SLDSISEVDM DFTMTLYLRH YWKDERLVFP STSNKSMTFD BACU016933/1-440 IPVGVDVQLE SLDSISEVDM DFTMTLYLRH YWKDERLVFP STSNKSMTFD 151 200 bmy_20451T0/1-277 GRLVKKIWVP DVFFVHSKRS FIHDTTTDNI MLRVFPDGQV LYSLRITVTA ENSBTAP00000047201/1-412 GRLVKKIWVP DVFFVHSKRS FIHDTTTDNI MLRVFPDGQV LYSMRITVTA ENSTTRP00000003458/1-489 GRLVKKIWVP DVFFVHSKRS FIHDTTTDNI MLRVFPDGQV LYSLRITVTA BACU016933/1-440 GRLVKKIWVP DVFFVHSKRS FIHDTTTDNI MLRVFPDGQV LYSLRITVTA 201 250 bmy_20451T0/1-277 MCNMDFSHFP LDSQTCSLEL ESYAYTDEDL MLYWKNGDES LKTDEKISLS ENSBTAP00000047201/1-412 MCNMDFSHFP LDSQTCSLEL ESYAYTDEDL MLYWKNGDES LKTDEKISLS ENSTTRP00000003458/1-489 MCNMDFGHFP LDSQTCSLEL ESYAYTDEDL MLYWKNGDES LKTDEKISLS BACU016933/1-440 MCNMDFSHFP LDSQTCSLEL ESYAYTDEDL MLYWKNGDES LKTDEKISLS 251 300 bmy_20451T0/1-277 QFLIQKFHTT SRLAFYSSTG WYNRLYINFT LRRHIFFFLL QTYFPATLMV ENSBTAP00000047201/1-412 QFLIQKFHTT SRLAFYSSTG WYNRLYINFT LRRHIFFFLL QTYFPATLMV ENSTTRP00000003458/1-489 QFLIQQFHTT SRLAFYSSTG WYNRLYINFT LRRHIFFFLL QTYFPATLMV BACU016933/1-440 QFLIQKFHTT SRLAFYSSTG WYNRLYINFT LRRHIFFFLL QTYFPATLMV 301 350 bmy_20451T0/1-277 MLSWVSFWID HRAVPARVSL ---------G ITTVLTMSTI ITGVNASMPR ENSBTAP00000047201/1-412 MLSWVSFWID RRAVPARVSL ---------G ITTVLTMSTI ITGVNASMPR ENSTTRP00000003458/1-489 MLSWVSFWID RRAVPARVSL ---------G ITTVLTMSTI ITGVNASMPR BACU016933/1-440 MLSWVSFWID HRAVPARVSL VAELKLDAAG ITTVLTMSTI ITGVNASMPR 351 400 bmy_20451T0/1-277 LSYIKAVDIY LWVSFVFVFL SVLEYAAVNY LTTVQE---X KPQEK----- ENSBTAP00000047201/1-412 VSYIKAVDIY LWVSFVFVFL SVLEYAAVNY LTTVQERKER KLQEKNMSRE ENSTTRP00000003458/1-489 VSYIKAVDIY LWVSFVFVFL SVLEYAAVNY LTTVQERKQR KLQEK----- BACU016933/1-440 VSYIKAVDIY LWVSFVFVFL SVLEYAAVNY LTTVLE---R KLQEK----- 401 450 bmy_20451T0/1-277 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000047201/1-412 NVSMTFEQTR DRAKGFPCMC GMLHSRTMML DGSYSESEAN SLAGYPRSHI ENSTTRP00000003458/1-489 ---------- -----FPCMC GMLHSRTMML GGSYSESEAN SLVGYPRSHI BACU016933/1-440 ---------- -----FPCMC GMLHSRTMML GGSCSESEAN SLAGYPRSHI 451 500 bmy_20451T0/1-277 ----VREVSF VSLL------ ----EPMLLV G--------- ---------- ENSBTAP00000047201/1-412 LPEEERQDKI VVHLALSNES SSSRKKGLLK GQVGLRIFQN THAIDKYSRL ENSTTRP00000003458/1-489 LTEEERQDKI VVHLALSSES NSSRKKGLLK GQVGLRIFQN THAIDKYSRL BACU016933/1-440 LTEEERQDKI VAHLALSSES NSSRKKGLLK GQVGLRIFQN THAIDKYSRL 501 550 bmy_20451T0/1-277 ---------- -------- ENSBTAP00000047201/1-412 IFPASYIFFN LIYWSVFA ENSTTRP00000003458/1-489 IFPASYIFFN LIYWSVLA BACU016933/1-440 IFPASYIFFN LIYWSVFA