KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:58:07 2014 Check: 00 .. Name: ENSTTRP00000007303/1-278 Len: 292 Check: 6077 Weight: 1.00 Name: ENSBTAP00000047205/1-292 Len: 292 Check: 6084 Weight: 1.00 Name: bmy_19164T0/1-250 Len: 292 Check: 2668 Weight: 1.00 Name: BACU010433/1-277 Len: 292 Check: 4745 Weight: 1.00 // 1 50 ENSTTRP00000007303/1-278 ---------- ----EMLSGV VVVSGKDSVQ HQGVSLTVEG TVNLQLSAKS ENSBTAP00000047205/1-292 MGTTLDIKIK RANKEMLSGV VVISGKDSVQ HQGLSLTVEG TVNLQLSAKS bmy_19164T0/1-250 ---------- -----MLSGV VVVSGKDSVQ HQGVFLTVEG TVNLQLSAKS BACU010433/1-277 ---------- -----MLSGV VVVSGKDSVQ HQGVSLTVEG TVNLQLSAKS 51 100 ENSTTRP00000007303/1-278 VGVFEAFYNS VKPIQIINST IEMVKPGKFP SGRTEIPFEF PLHVKGNRVL ENSBTAP00000047205/1-292 VGVFEAFYNS VKPIQVINST IEMVKPGKFP GGKTEIPFEF PLHVKSNKVL bmy_19164T0/1-250 VGVFEAFYNS VKPIQIINST IEMVKPGKFP SGKTEIPFEF PLHVKGNRVL BACU010433/1-277 VGVFEAFYNS VKPIQIINST IEMVKPGKFP SGKTEIPFEF PLHVKGNRVL 101 150 ENSTTRP00000007303/1-278 YETYHGVFVN IQYTLRCDMR RSLLAKDLTK TCEFIVHSAP QKRKLTPSPV ENSBTAP00000047205/1-292 YETYHGVFVN IQYTLRCDMR RSLLAKDLTK TCEFIVHSTP QKGKWTPSPV bmy_19164T0/1-250 YETYHGVFVN IQ-------- ---------- ---------P QKGKLTPSPV BACU010433/1-277 YETYHGVFVN IQYTLRCDMR RSLLAKDLTK TCEFIVHSAP QKGKLTPSPV 151 200 ENSTTRP00000007303/1-278 AFTVTPETLQ NVKERALLPK FLIRGHLNST NCVITQPLTG ELVVESSEAA ENSBTAP00000047205/1-292 DFTITPDTLQ NVKERALLPK FLIRGHLNST NCVITQPLTG ELVVESSEAA bmy_19164T0/1-250 DFTVTPETLQ NVKERALLPK FLIRGHLNST NCVITQPLTG ELVVESSEAA BACU010433/1-277 DFTVTPETLQ NVKERALLPK FLIRGHLNST NCVITQPLTG ELVVESSEAA 201 250 ENSTTRP00000007303/1-278 IKSIELQLVR VETCGCAEGY ARDATEIQNI QIADGXXXXX XXXXXXXXXX ENSBTAP00000047205/1-292 IKSIELQLVR VETCGCAEGY ARDATEIQNI QIADGDVCRG LSIPIYMVFP bmy_19164T0/1-250 IKSIELQLVR VETCGCAEGY ARDATEIQNI QIADGDVCRG LSVPIYMVFP BACU010433/1-277 IKSIELQLVR VETCGCAEGY ARDATEIQNI QIADGDVCRG LSVPIYMVFP 251 300 ENSTTRP00000007303/1-278 XXXXXXXXXX XXXXXXFEVN IVVLLHPEHL ITENFPLKLC RV ENSBTAP00000047205/1-292 RLFTCPTLET TNFKVEFEVN IVVLLHPDHL ITENFPLKLC RM bmy_19164T0/1-250 RLFTCPTLET TNFKVEFEVN IVVLLHPEHL ITENFPLKLC RV BACU010433/1-277 RLFTCPTLET TNFKVEFEVN IVVLLHPEHL ITENFPLKLC RV