KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:58:08 2014 Check: 00 .. Name: BACU003807/1-184 Len: 292 Check: 5463 Weight: 1.00 Name: bmy_02308T0/1-229 Len: 292 Check: 1631 Weight: 1.00 Name: ENSBTAP00000047271/1-286 Len: 292 Check: 8761 Weight: 1.00 Name: ENSTTRP00000012060/1-288 Len: 292 Check: 9207 Weight: 1.00 Name: ENSP00000310332/1-286 Len: 292 Check: 8916 Weight: 1.00 // 1 50 BACU003807/1-184 ---------- ---------- ---------- ---------- ---------- bmy_02308T0/1-229 -----MAAPA PGAGAASGGA GCSGGGGAGA GAGSGSGAAG AGGRLPSRVL ENSBTAP00000047271/1-286 PAGEAMAAPA PGAGAASGGA GCS-GG---- GAGAGSG-SG AGGRLPSRVQ ENSTTRP00000012060/1-288 PAVEAMAAPA PGAGAASGGA GCS-GGG--- GAGAGSGAAG AGGRLPSRVL ENSP00000310332/1-286 -----MAAPA PGAGAASGGA GCS-GGGAGA GAGSGSGAAG AGGRLPSRVL 51 100 BACU003807/1-184 ---------- ---------- ---------- ---------- ---------- bmy_02308T0/1-229 ELVFSYLELS ELRSCALVCK HWYRCLHGDE NSEVWRSLCA RSLAEEALRT ENSBTAP00000047271/1-286 GLVFSYLELS ELRSCALVCK HWYRCLHGDE NSEVWRSLCA RSLAEEALRT ENSTTRP00000012060/1-288 ELVFSYLELS ELRSCALVCK HWYRCLHGDE NSEVWRSLCA RSLAEEALRT ENSP00000310332/1-286 ELVFSYLELS ELRSCALVCK HWYRCLHGDE NSEVWRSLCA RSLAEEALRT 101 150 BACU003807/1-184 --------MI VKIRAFQHAF STNDCSRNVY IKKNGFTLHR NPIAQSTDGA bmy_02308T0/1-229 DILCNLPSYK AKIRAFQHAF STNDCSRNVY IKKNGFTLHR NPIAQSTDGA ENSBTAP00000047271/1-286 DILCNLPSYK AKIRAFQHAF STNDCSRNVY IKKNGFTLHR NPIAQSTDGA ENSTTRP00000012060/1-288 DILCNLPSYK AKIRAFQHAF STNDCSRNVY IKKNGFTLHR NPIAQSTDGA ENSP00000310332/1-286 DILCNLPSYK AKIRAFQHAF STNDCSRNVY IKKNGFTLHR NPIAQSTDGA 151 200 BACU003807/1-184 RTKIGFSEGR HAWEVWWEGP LGTVAVIGIA TKRAPMQCQG YVALLGSDDQ bmy_02308T0/1-229 RTKIGFSEGR HAWEVWWEGP LGTVAVIGIA TKRAPMQCQG YVALLGSDDQ ENSBTAP00000047271/1-286 RTKIGFSEGR HAWEVWWEGP LGTVAVIGIA TKRAPMQCQG YVALLGSDDQ ENSTTRP00000012060/1-288 RTKIGFSEGR HAWEVWWEGP LGTVAVIGIA TKRAPMQCQG YVALLGSDDQ ENSP00000310332/1-286 RTKIGFSEGR HAWEVWWEGP LGTVAVIGIA TKRAPMQCQG YVALLGSDDQ 201 250 BACU003807/1-184 SWGWNLVDNN LLHNGEVNGS FPQCNNAPKY QIGERIRVIL DMEDKTLAFE bmy_02308T0/1-229 SWGWNLVDNN LLHNGEVNGS FPQCNNAPKY QVRN------ ---------- ENSBTAP00000047271/1-286 SWGWNLVDNN LLHNGEVNGS FPQCNNAPKY QIGERIRVIL DMEDKTLAFE ENSTTRP00000012060/1-288 SWGWNLVDNN LLHNGEVNGS FPQCNNAPKY QIGERIRVIL DMEDKTLAFE ENSP00000310332/1-286 SWGWNLVDNN LLHNGEVNGS FPQCNNAPKY QIGERIRVIL DMEDKTLAFE 251 300 BACU003807/1-184 RGYEFLGVAF RGLPKVCLYP AVSAVYGNTE VTLVYLGKPL DG bmy_02308T0/1-229 ---------- ---------- ---------- ---------- -- ENSBTAP00000047271/1-286 RGYEFLGVAF RGLPKVCLYP AVSAVYGNTE VTLVYLGKPL DG ENSTTRP00000012060/1-288 RGYEFLGVAF RGLPKVCLYP AVSAVYGNTE VTLVYLGKPL DG ENSP00000310332/1-286 RGYEFLGVAF RGLPKVCLYP AVSAVYGNTE VTLVYLGKPL DG