KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:58:08 2014 Check: 00 .. Name: ENSP00000299191/1-265 Len: 388 Check: 1703 Weight: 1.00 Name: ENSBTAP00000047302/1-247 Len: 388 Check: 5482 Weight: 1.00 Name: bmy_04261T0/1-360 Len: 388 Check: 6377 Weight: 1.00 Name: BACU001882/1-270 Len: 388 Check: 6777 Weight: 1.00 // 1 50 ENSP00000299191/1-265 MSEQQMDLKD LMPTKRKYMW KTAEDRRMSD LTCVLEWLER RQGKKKQAPE ENSBTAP00000047302/1-247 MTEQSEDLKN SLPTERKLVW RSAEERRMSD LTRVLEWLER RQGKKKQALQ bmy_04261T0/1-360 --MDTGCIRR QRGCEGEQAR RSGCES---- ------WVA- -PSPLQGAGL BACU001882/1-270 MTEQSEDVKD SLPTERKHVW RTAEERRMSD LARVLEWLER RQGKKKQALQ 51 100 ENSP00000299191/1-265 KQKPKVVTVL KRNKKKEEKK GKGLMTARG- -----GNRR- --DTETSQQA ENSBTAP00000047302/1-247 KSKPKVVI-A SAEPAKEEKK TKTALKHQGA RRRSQGNQQV AFSEQISSQA bmy_04261T0/1-360 KNKPKVVT-L STAPVKEEKK AKNVQKQQG- -----GNHQV AFSK----QA BACU001882/1-270 KNKPKVVT-L STAPVKEEKK AKTVQKQQG- -----GNHQV AFSKQLPSQA 101 150 ENSP00000299191/1-265 LGKRFRKD-- -AASYRSLYG VEQKGKHL-S MVPGSYIKDG PKKSDTDIKD ENSBTAP00000047302/1-247 SGQNSKED-E TSALYRRLYR VEAKGKRLSS LTPSTNPKDT PRRSDLDIKD bmy_04261T0/1-360 SGQSSKKD-- GEASFRRLYR AEAKGKRLSS MTPGNYPKDA PRKSDLDIKD BACU001882/1-270 SGQSSKKHGE ASALYRRLYR AEAKGKRLSS MTPGNYPKDA PRKSDLDIKD 151 200 ENSP00000299191/1-265 AVDPESTQRP NPFRRQSIVL DPMLQEGTFN SQRATFIRDW SNKMPDMAYE ENSBTAP00000047302/1-247 AVAQESAQRP MQYRRQSVI- EPVLQDTAFA QRKSTVFREW GGKIPDASYE bmy_04261T0/1-360 EITQESTQRS TPYHRQSII- EPMLQDAIFV PRKSTLLRDW VGKMSDTSYE BACU001882/1-270 EITQESTQRL TPYHRQSII- EPMLQDAIFV PRKSTLLRDW VGKMPDVSYE 201 250 ENSP00000299191/1-265 RKLKSLMEKS TEPKMETMRM LK-------- ---------- ---------- ENSBTAP00000047302/1-247 RKLKSLMEKG TEPKMEMMKM LK-------- ---------- ---------- bmy_04261T0/1-360 RKLKNLMEKG NEPKMEMVRM LKPEEVLSCR KLPQDPLHYG VELLVTVAAI BACU001882/1-270 RKLRSLMEKG NEPKTEMARM LK-------- ---------- ---------- 251 300 ENSP00000299191/1-265 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000047302/1-247 ---------- ---------- ---------- ---------- ---------- bmy_04261T0/1-360 PRATCYLDIK DEITQESTQR STPYHRQSII EPMLQDAIFV PRKSTLLRDW BACU001882/1-270 ---------- ---------- ---------- ---------- ---------- 301 350 ENSP00000299191/1-265 ---------- ---------- ---------- --PEEVLSCR YLRLSKENIR ENSBTAP00000047302/1-247 ---------- ---------- ---------- --PEEVLSCR YLRLS----R bmy_04261T0/1-360 VGKMSDTSYE RKLKNLMEKG NEPKMEMVRM LKPEEVLSCR YLRLSKNNIR BACU001882/1-270 ---------- ---------- ---------- --PEEVLSCR YLRLSKNNIR 351 400 ENSP00000299191/1-265 TLLKLCKDAG MNVDIHPHMV EEDIDAKKVF TGIPSMAL ENSBTAP00000047302/1-247 TTFEPCSSCA RMRE------ ---------- -------- bmy_04261T0/1-360 TLLKLCKDAG MNVDIHPHVV EGEIDAKKVF NQNISVAL BACU001882/1-270 TLLKLCKDAG MNVDIHPHVV EGEIDAKKVF NQNISVAL