KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:58:08 2014 Check: 00 .. Name: bmy_07974T0/1-569 Len: 610 Check: 8134 Weight: 1.00 Name: ENSTTRP00000013210/1-566 Len: 610 Check: 3980 Weight: 1.00 Name: ENSP00000391774/1-551 Len: 610 Check: 6552 Weight: 1.00 Name: ENSBTAP00000047307/1-551 Len: 610 Check: 6552 Weight: 1.00 Name: BACU016438/1-514 Len: 610 Check: 4917 Weight: 1.00 // 1 50 bmy_07974T0/1-569 MADGVDHIDI YADVGEEFNQ EAEYGGHDQI DLYDDVISPS ANNGDAPEDR ENSTTRP00000013210/1-566 ---------- ---------- EAEYGGHDQI DLYDDVISPS ANNGDAPEDR ENSP00000391774/1-551 MADGVDHIDI YADVGEEFNQ EAEYGGHDQI DLYDDVISPS ANNGDAPEDR ENSBTAP00000047307/1-551 MADGVDHIDI YADVGEEFNQ EAEYGGHDQI DLYDDVISPS ANNGDAPEDR BACU016438/1-514 ---------- ---------- ---------- ---------- ---------- 51 100 bmy_07974T0/1-569 DYMDTLPPTV GDDVGKGAAP NVVYTYTGKR IALYIGNLTW WTTDEDLTEA ENSTTRP00000013210/1-566 DYMDTLPPTV GDDVGKGAAP NVVYTYTGKR IALYIGNLTW XXXDEDLTEA ENSP00000391774/1-551 DYMDTLPPTV GDDVGKGAAP NVVYTYTGKR IALYIGNLTW WTTDEDLTEA ENSBTAP00000047307/1-551 DYMDTLPPTV GDDVGKGAAP NVVYTYTGKR IALYIGNLTW WTTDEDLTEA BACU016438/1-514 --MDTLPPTV GDDVGKGAAP NVVYTYTGKR IALYIGNLTW WTTDEDLTEA 101 150 bmy_07974T0/1-569 VHSLGVNDIL EIKFFENRAN GQSKGFALVG VGSEASSKKL MDLLPKRELH ENSTTRP00000013210/1-566 -HSLGVNDI- EIKFFENRAN DQSKGFALVG VGSEASSKKL MDLLPKRELH ENSP00000391774/1-551 VHSLGVNDIL EIKFFENRAN GQSKGFALVG VGSEASSKKL MDLLPKRELH ENSBTAP00000047307/1-551 VHSLGVNDIL EIKFFENRAN GQSKGFALVG VGSEASSKKL MDLLPKRELH BACU016438/1-514 VHSLGVNDIL EIKFFENRAN GQSKGFALVG VGSEASSKKL MDLLPKRELH 151 200 bmy_07974T0/1-569 GQNPVVTPCN KQFLSQFEMQ SRKTTQSGQM SGEGKAGPPG GSSRAAFPQG ENSTTRP00000013210/1-566 GQNPVVTPCN KQFLSQFEMQ SRKTTQSGQM SGEGKAGPPG GSSRAAFPQG ENSP00000391774/1-551 GQNPVVTPCN KQFLSQFEMQ SRKTTQSGQM SGEGKAGPPG GSSRAAFPQG ENSBTAP00000047307/1-551 GQNPVVTPCN KQFLSQFEMQ SRKTTQSGQM SGEGKAGPPG GSSRAAFPQG BACU016438/1-514 GQNPVVTPCN KQFLSQFEMQ SRKTTQSGQM SGEGKAGPPG GSSRAAFPQG 201 250 bmy_07974T0/1-569 GRGRARFPGA VPGGDRFPGP AGPGGPPPPF P--------- ---------- ENSTTRP00000013210/1-566 GRGRARFPGA VPGGDRFPGP AGPGGPPPPF PGNLIKHLVK GTRPLFLETR ENSP00000391774/1-551 GRGRGRFPGA VPGGDRFPGP AGPGGPPPPF P--------- ---------- ENSBTAP00000047307/1-551 GRGRGRFPGA VPGGDRFPGP AGPGGPPPPF P--------- ---------- BACU016438/1-514 GRGRARFPGA VPGGDRFPGP AGPGGPPPPF P--------- ---------- 251 300 bmy_07974T0/1-569 ---------- --------AG QTPPRPPLGP PGPPGPPGPP PPGQVLPPPL ENSTTRP00000013210/1-566 IPWHMGHSIE EIPIFGLKAG QTPPRPPLGP PGPPGPPGPP PPGQVLPPPL ENSP00000391774/1-551 ---------- --------AG QTPPRPPLGP PGPPGPPGPP PPGQVLPPPL ENSBTAP00000047307/1-551 ---------- --------AG QTPPRPPLGP PGPPGPPGPP PPGQVLPPPL BACU016438/1-514 ---------- --------AG QTPPRPPLGP PGPPGPPGPP PPGQVLPPPL 301 350 bmy_07974T0/1-569 AGPPNRGDRP PPPVLFPGQP FGQPPLGPLP PGPPPPVPGY GPPPGPPPPQ ENSTTRP00000013210/1-566 AGPPNRGDRP PPPVLFPGQP FGQPPLGPLP PGPPPPVPGY GPPPGPPPPQ ENSP00000391774/1-551 AGPPNRGDRP PPPVLFPGQP FGQPPLGPLP PGPPPPVPGY GPPPGPPPPQ ENSBTAP00000047307/1-551 AGPPNRGDRP PPPVLFPGQP FGQPPLGPLP PGPPPPVPGY GPPPGPPPPQ BACU016438/1-514 AGPPNRGDRP PPPVLFPGQP FGQPPLGPLP PGPPPPVPGY GPPPGPPPPQ 351 400 bmy_07974T0/1-569 QGPPPPPGPF PPRPPGPLGP PLTLAPPPHL PGPPPGAPPP APHVNPAFFP ENSTTRP00000013210/1-566 QGPPPPPGPF PPRPPGPLGP PLTLAPPPHL PGPPPGAPPP APHVNPAFFP ENSP00000391774/1-551 QGPPPPPGPF PPRPPGPLGP PLTLAPPPHL PGPPPGAPPP APHVNPAFFP ENSBTAP00000047307/1-551 QGPPPPPGPF PPRPPGPLGP PLTLAPPPHL PGPPPGAPPP APHVNPAFFP BACU016438/1-514 QGPPPPPGPF PPRPPGPLGP PLTLAPPPHL PGPPPGAPPP APHVNPAFFP 401 450 bmy_07974T0/1-569 PPTNSGMPTS DSRGPPPTDP YGRPPPYDRG DYGPPGREMD TARTPLSEAE ENSTTRP00000013210/1-566 PPTNSGMPTS DSRGPPPTDP YGRPPPYDRG DYGPPGREMD TARTPLSEAE ENSP00000391774/1-551 PPTNSGMPTS DSRGPPPTDP YGRPPPYDRG DYGPPGREMD TARTPLSEAE ENSBTAP00000047307/1-551 PPTNSGMPTS DSRGPPPTDP YGRPPPYDRG DYGPPGREMD TARTPLSEAE BACU016438/1-514 PPTNSGMPTS DSRGPPPTDP YGRPPPYDRG DYGPPGREMD TARTPLSEAE 451 500 bmy_07974T0/1-569 FEEIMNRNRA ISSSAISRAV SDASAGDYGS AIETLVTAIS LIKQSKVSAD ENSTTRP00000013210/1-566 FEEIMNRNRA ISSSAISRAV SDASAGDYGS AIETLVTAIS LIKQSKVSAD ENSP00000391774/1-551 FEEIMNRNRA ISSSAISRAV SDASAGDYGS AIETLVTAIS LIKQSKVSAD ENSBTAP00000047307/1-551 FEEIMNRNRA ISSSAISRAV SDASAGDYGS AIETLVTAIS LIKQSKVSAD BACU016438/1-514 FEEIMNRNRA ISSSAISRAV SDASAGDYGS AIETLVTAIS LIKQSKVSAD 501 550 bmy_07974T0/1-569 DRCKVLISSL QDCLHGIESK SYGSGSR--- -QFMKHFSLL NKNENEDVND ENSTTRP00000013210/1-566 DRCKVLISSL QDCLHGIESK SYGSGS---- ---------- -RRERSRERD ENSP00000391774/1-551 DRCKVLISSL QDCLHGIESK SYGSGS---- ---------- -RRERSRERD ENSBTAP00000047307/1-551 DRCKVLISSL QDCLHGIESK SYGSGS---- ---------- -RRERSRERD BACU016438/1-514 DHCKVLISSL QDCLHGIESK SYGSGSSYLI MESINPVISF RRRERSRERD 551 600 bmy_07974T0/1-569 QEKGIIVDHE KRVGVINPAV EIVMMIITER EAENERDTGT GTGTVIESAT ENSTTRP00000013210/1-566 HSRSREKSRR HKSRSRDRHD DYYRERSRER ERHRDRDRDR DRERDREREY ENSP00000391774/1-551 HSRSREKSRR HKSRSRDRHD DYYRERSRER ERHRDRDRDR DRERDREREY ENSBTAP00000047307/1-551 HSRSREKSRR HKSRSRDRHD DYYRERSRER ERHRDRDRDR DRERDREREY BACU016438/1-514 HSRSREKSRR HKSRSRDRHD DYYRERSRER ERHRDRDRDR DRERDREREY 601 650 bmy_07974T0/1-569 ESASIVIVRS ENSTTRP00000013210/1-566 RHR------- ENSP00000391774/1-551 RHR------- ENSBTAP00000047307/1-551 RHR------- BACU016438/1-514 RHR-------