KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:58:11 2014 Check: 00 .. Name: ENSP00000305696/1-343 Len: 392 Check: 1063 Weight: 1.00 Name: ENSBTAP00000047450/1-292 Len: 392 Check: 708 Weight: 1.00 Name: ENSTTRP00000008570/1-327 Len: 392 Check: 7790 Weight: 1.00 Name: bmy_16560T0/1-288 Len: 392 Check: 6019 Weight: 1.00 Name: BACU004437/1-338 Len: 392 Check: 8664 Weight: 1.00 // 1 50 ENSP00000305696/1-343 MWAAAGGLWR SRAGLRALFR SRDAALFPGC ERGLHCSAVS C-KNWLKKFA ENSBTAP00000047450/1-292 -------MWA ALRGRPGLH- ---LGLLSG- ARGLHSSPVS CGKNLLKKFA ENSTTRP00000008570/1-327 -QAVAAEMWA ALRG-RGLH- ---VGLLLGG ARGLHSSPVS CGKNLLKKFA bmy_16560T0/1-288 ---------- ---------- ---------- ---------- ---------- BACU004437/1-338 ---------- ---------- ---------- ---------- --------LS 51 100 ENSP00000305696/1-343 SKTKKKVWYE SPSLGSHSTY KPSKLEFLMR STSKKTRKED HARLRALNGL ENSBTAP00000047450/1-292 SKTKKKFWYE GPSLGSHLTH KSSQLEFLTK STSRRTRKED QVRLRALNGL ENSTTRP00000008570/1-327 SKTKKKFWYE GPSLGSHLTH KPSQLASLTK STSKRARRED HVRLRALNGL bmy_16560T0/1-288 ----KKFWYE GPSLGSHLTH KPSQWASLTK STSKRARRED HVRLRALNGL BACU004437/1-338 SPHRKKFWYE GPSLGSHLTH KPSQWASLTK STSKRARRED HVRLRALNGL 101 150 ENSP00000305696/1-343 LYKALTDLLC TPEVSQELYD LNVELSKVSL TPDFSACRAY WKTTLSAEQN ENSBTAP00000047450/1-292 LYKALTDLLC TPEVSQELCD LNVELCKVSL TSDFSACRVF WRATLSEAQN ENSTTRP00000008570/1-327 LYKALNELLC TPEVSQELCD LNVELSKVSL TSDFSTCRVY WRTTVSEAQN bmy_16560T0/1-288 LYKALTELLC TPEVSQELCD LNVELSKVSL TADFSACRVF WRTTVSEAQN BACU004437/1-338 LYKALTELLC TPQVSQELCD LNVELSKVSL TADFSACRVF WRTTVSEARN 151 200 ENSP00000305696/1-343 AHMEAVLQRS AAHMRHLLMS QQTLRNVPPI VFVQDKGNAA LAELDQLLAV ENSBTAP00000047450/1-292 AHTEAVLRRS AAHMRHLLMS QQTLRNVPPI VFVQDKKYAA VMEVDRLLAI ENSTTRP00000008570/1-327 ANVGAVLQRS AAHMRHLLMS QQTLRNMPPI VFVQDKRNAA AVEVDRLLAI bmy_16560T0/1-288 ANMEAVLQRS AAPMRHLLMS QQTLRNMPPI VFVQDKKNAA VVEVDRLLAI BACU004437/1-338 ASMEAVLRRS AAPMRHLLMS QQTLRNMPPI VFVQDRKNAA VAEVDRLLAV 201 250 ENSP00000305696/1-343 ADFGPRDERD NFVQNDFRDP ---DAPQPCG TTEPTTSSSL CGIDHEALNK ENSBTAP00000047450/1-292 ADFGPRGEKE DFVQSDFSDP EALDAASPSD TLGPAAHLNL CGIDHEALNK ENSTTRP00000008570/1-327 ADFGPPDE-K DFEQNDFSAP EALDTTSPRG TLGPAAPSSL CGIDHEALNK bmy_16560T0/1-288 ADFGPPDE-E DFVQDDSSDP EALDTASPCD TLGPAAPSSL CGIDHEALNK BACU004437/1-338 ADFGPPDE-E DFVQDDSSDP EALDTASPCD TLGPAAPSSL CGIDHEALNK 251 300 ENSP00000305696/1-343 QIMEYKRRKD KGLG--GLVW QGQVAELTTQ MKKGRKRAKP RLEQDSSLKS ENSBTAP00000047450/1-292 QILEYKRRRE QGHGSASPLW PEHVADLRKQ MR--RRKAKP HVDDDLSPKN ENSTTRP00000008570/1-327 QILEYKRRRE KGCGSTGPAW LEPTAEL--- MR--KRKAGP CVDDDLLPKD bmy_16560T0/1-288 QILEYKRRRE KGRGSLGPAW PEPTAEL--- MG--KRKAKP RMDDDLSPKD BACU004437/1-338 QILEYKRRRE KGRGSVGPAW PEHTTEL--- MR--KRKAKP RVDDDLSPKD 301 350 ENSP00000305696/1-343 YLSGEEVEDD LDLVGAPEYE CYAPD----- ---------- ---------- ENSBTAP00000047450/1-292 YLQG------ ---------- ---------- ---------- ---------- ENSTTRP00000008570/1-327 CLWETGSDGP LDDGALPEEH TPGRK----- ---------- ---------- bmy_16560T0/1-288 CLWETGSAEP LDDGALPEEH TPGY------ ---------- ---------- BACU004437/1-338 CLWETGSDEP LDDGALPEEH GPGLRPELTL MPSEAEEMPS QFCMKIHGAA 351 400 ENSP00000305696/1-343 -TEELE---- ---------- ---AERGGGR TEDGHSCGAS RE ENSBTAP00000047450/1-292 ---------- ---------- ---GE----- ---------- -- ENSTTRP00000008570/1-327 -ARGR----- ---------- ---GEPGAER KDR------- -- bmy_16560T0/1-288 -AWGLQ---- ---------- ---GQSGNQR QRERIADPDP LP BACU004437/1-338 VAFTLKKRRV IYCLHWEEPL LCSGNSTKLA KSSKMAAEFQ LS