KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:58:16 2014 Check: 00 .. Name: ENSP00000322061/1-843 Len: 877 Check: 6684 Weight: 1.00 Name: ENSBTAP00000047583/1-843 Len: 877 Check: 2864 Weight: 1.00 Name: bmy_06106T0/1-783 Len: 877 Check: 7593 Weight: 1.00 Name: BACU014995/1-843 Len: 877 Check: 6639 Weight: 1.00 Name: ENSTTRP00000010373/1-843 Len: 877 Check: 7197 Weight: 1.00 // 1 50 ENSP00000322061/1-843 ---------- -----MKVIS LFILVGF-IG EFQS------ -------FSS ENSBTAP00000047583/1-843 ---------- -----MKAIT LLFLVGF-IG EFQV------ -------FSS bmy_06106T0/1-783 MFSQNYTSKQ SQLTVAKAWG KMLSHGFRLF DLESRNEPPG SDLSKSFIEN BACU014995/1-843 ---------- -----MKAIS LFFLVGF-IG EFQV------ -------FSS ENSTTRP00000010373/1-843 ---------- -----MKAIS LFFLVGF-IG EFQV------ -------FSS 51 100 ENSP00000322061/1-843 ASSPVNCQWD FYAPWSECNG CTKTQTRRRS VAVYGQYGGQ PCVGNAFETQ ENSBTAP00000047583/1-843 ASSPINCQWG SYAPWSECNG CTKTQTRRRS IAVYGQYGGH SCVGSAFETQ bmy_06106T0/1-783 ASSPVNCQWA SYAPWSECNG CTKTQTRRRS IAVYGQYGGY PCVGSAFEPQ BACU014995/1-843 ASSPVNCQWA SYAPWSECNG CTKTQTRRRS VAVYGQYGGH PCVGSAFEPQ ENSTTRP00000010373/1-843 ASSPVNCQWA SYAPWSECNG CTKTQTRRRS VAVYGQYGGH PCVGSAFEPQ 101 150 ENSP00000322061/1-843 SCEPTRGCPT EEGCGERFRC FSGQCISKSL VCNGDSDCDE DSADEDRCED ENSBTAP00000047583/1-843 PCQPTRGCPT EDGCGERFRC FSGQCISKSL VCNGDSDCEE DGADEDRCED bmy_06106T0/1-783 SCEPTRGCPT EEGCGERFRC FSGQCISRSL VCNGDPDCEE DSADEDRCED BACU014995/1-843 SCEPTRGCPT EEGCGERFRC FSGQCISRSL VCNGDSDCEE DGADEDKCED ENSTTRP00000010373/1-843 SCEPTRGCPT EEGCGERFRC FSGQCISRSL VCNGDSDCEE DSADEDRCED 151 200 ENSP00000322061/1-843 SERRPSCDID KPPPNIELTG NGYNELTGQF RNRVINTKSF GGQCRKVFSG ENSBTAP00000047583/1-843 AESRPACDKD KPPPNIELTG RGYNALTGQF RNQVLNTKSF GGQCRKVYSG bmy_06106T0/1-783 SESRPSCDLD KPPPNIELTG HGYNALTGQF RNKVLNTKSF GGQCRK---- BACU014995/1-843 SESRPSCDLD KPPPNIELTG HGYNALTGQF RNKVLNTKSF GGQCRKVFSG ENSTTRP00000010373/1-843 SESRPSCDLD KPPPNIELTG QGYNALTGQF RNKVLNTKSF GGQCRKVFSG 201 250 ENSP00000322061/1-843 DGKDFYRLSG NVLSYTFQVK INNDFNYEFY NSTWSYVKHT STEHTSSSRK ENSBTAP00000047583/1-843 DGRDFYRLSG NILSYTFQVK INNDFNNEFY NSTWAYVKET STEHSSSSKG bmy_06106T0/1-783 ---------- --------VK INNDFNNEFY NSTWSYVKHT STEHSSSSKG BACU014995/1-843 DGRDFYRLSG NILSYTFQVK INNDFNYEFY NSTWSYVKHT STEHSSSSKG ENSTTRP00000010373/1-843 DGRDFYRLSG NILSYTFQVK INNDFNYEFY NSTWSYVKHT STEHSSSSRG 251 300 ENSP00000322061/1-843 RSFFRSSSSS SRSYTSHTNE IHKGKSYQLL VVENTVEVAQ FINNNPEFLQ ENSBTAP00000047583/1-843 RFLFFSSSSS SHGYSSNTNI LTKKKSYQLL VLQNTVEVAQ FINNNPEFLQ bmy_06106T0/1-783 RFLFFSSSSS SYSYSSNMEK IHKEKSYQLL VLQNTVEVAQ FINNNPDFLQ BACU014995/1-843 RFLFFSSSSS SYSYSSNMEE IHKEKSYQLL VLQNTVEVAQ FINNNPDFLQ ENSTTRP00000010373/1-843 RFLFFSSSSS SYSYSSGTEK ILKEKSYQLL VLQNTVEVAQ FINNNPDFLQ 301 350 ENSP00000322061/1-843 LAEPFWKELS HLPSLYDYSA YRRLIDQYGT HYLQSGSLGG EYRVLFYVDS ENSBTAP00000047583/1-843 LAESFWKELS YLPSLYDYSA YRRLIDQYGT HYLQSGSLGG EYKVIFHMDS bmy_06106T0/1-783 LAESFWKELS YLPSLYDYSA YRRLIDQYGT HYLQSGSLGG EYKVIFYLDS BACU014995/1-843 LAESFWKELS YLPPLYDYSA YRRLIDQYGT HYLQSGSLGG EYKVIFYLDS ENSTTRP00000010373/1-843 LAESFWKELS YLPSLYDYSA YRRLIDQYGT HYLQSGSLGG EYKVIFYLDS 351 400 ENSP00000322061/1-843 EKLKQNDFNS VEEKKCKSSG WHFVVKFSSH GCKELENALK AASGTQNNVL ENSBTAP00000047583/1-843 EKVKKFDFHS EDKRKCASSH FQFLFTSSKQ KCTTMEEVLK SVSENEGNLL bmy_06106T0/1-783 EKIKQSGLSS EEKKKCASSH IXFLFKSSEH TCKQMEETLK LVSGAQGNVL BACU014995/1-843 EKIKQSGLSS EEKKKCASSH INFLFKLSEH TCKQMEETLK LVSGAQGNVL ENSTTRP00000010373/1-843 EKIKQSAFGS EKKKKCASSH IKFLFKSSEH ACKEMEEALK LAAGTQGNVL 401 450 ENSP00000322061/1-843 RGEPFIRGGG AGFISGLSYL ELDNPAGNKR RYSAWAESVT NLPQVIKQKL ENSBTAP00000047583/1-843 RGVPFVRGGH SGFLAGLSYL DLNNPAGNKR RYSQWAGSVP DLPEVIKQKL bmy_06106T0/1-783 RGVPFIRGGR PGLVSGLSYL ELDNPAGNKW RYSRWAGSVT ELPQVIKQKL BACU014995/1-843 RGDPFVRGGR PGLVSGLSYL ELDNPAGNKW RYSRWAGSVT ELPQVIKQKL ENSTTRP00000010373/1-843 RGVPSVRGGR PGLVSGLSYL ELDNPAGNKL RYSRWAGSVT ELPQIIKQKL 451 500 ENSP00000322061/1-843 TPLYELVKEV PCASVKKLYL KWALEEYLDE FDPCHCRPCQ NGGLATVEGT ENSBTAP00000047583/1-843 TPLYELVKEV PCASVKKLYL KRAIEEYLDE FDPCHCRPCH NGGMATVQGS bmy_06106T0/1-783 TPLXELVKEV PCASVKRLYL KRAIEEYLDE FDPCHCRPCQ NGGMATVKGT BACU014995/1-843 TPLYELVKEV PCASVKRLYL RRAIEEYLDE FDPCHCRPCQ NGGMATVKGT ENSTTRP00000010373/1-843 TPLYELVKEV PCASVKRLYL KRAIEEYLDE FDPCHCRPCQ NGGMATVKGT 501 550 ENSP00000322061/1-843 HCLCHCKPYT FGAACEQGVL VGNQAGGVDG GWSCWSSWSP CVQGKKTRSR ENSBTAP00000047583/1-843 QCQCYCKPKT SGVACEQGVL LGDQAGGVDG GWNCWSSWGP CVQGKKTRSR bmy_06106T0/1-783 QCQCHCKPYT FGVACEQGAL VGDQAGGVDG GWSCWSSWGP CVQGKKTRSR BACU014995/1-843 QCQCHCKPYT FGVACEQGAL VGDQAGGVDG GWSCWSSWGP CVQGKKTRSR ENSTTRP00000010373/1-843 QCECHCKPYT FGVACEQGAL VGDQAXXXXX XXXXXXXXXX XXXXXXXXXX 551 600 ENSP00000322061/1-843 ECNNPPPSGG GRSCVGETTE STQCEDEELE HLRLLEPHCF PLSLVPTEFC ENSBTAP00000047583/1-843 QCNNPSPSAG GKSCIGETSE TRQCEDGELE HLRLLEPHCF PLSLVPTKFC bmy_06106T0/1-783 ECNNPPPSEG GKSCIGETSE TRQCEDEELE HLRLLEPHCF PLSLVPTEFC BACU014995/1-843 ECNNPPPSEG GKSCIGETSE TRQCEDEELE HLRLLEPHCF PLSLVPTEFC ENSTTRP00000010373/1-843 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXLLEPHCF PLSLVPTEFC 601 650 ENSP00000322061/1-843 PSPPALKDGF VQDEGTMFPV GKNVVYTCNE GYSLIGNPVA RCGEDLRWLV ENSBTAP00000047583/1-843 SSPPALKDGF VQDEGATFPV GKNIMYTCKE GYSLVGDPVA RCGEDLQWLV bmy_06106T0/1-783 PSPPALKDGY VQDEGAMFPV GKNIVYTCHE GYSLVGDPVA RCGENLQWLV BACU014995/1-843 PSPPALKDGY VQDVGAMFPV GKNIVYTCHE GYSLVGDPVA RCGENLQWLV ENSTTRP00000010373/1-843 PSPPALKDGY VQDEGAMFPV GKNIVYTCNE GYSLVGDPVA RCGENLQWLV 651 700 ENSP00000322061/1-843 GEMHCQKIAC VLPVLMDGI- -QSHPQKPFY TV---GEKVT VSCSGGMSLE ENSBTAP00000047583/1-843 GNMHCQKIAC VLPALMDGI- -QSHPHKPFY TI---GEKVT ISCSGGRSLE bmy_06106T0/1-783 GKMHCQKMEN IMFVTIKNKX EENHTCILFY MIFLFLEXII FNSMLKFGFY BACU014995/1-843 GKMHCQKIAC VLPALMDGI- -QSHPHKPFY TV---GEKVT FSCSGGRSLE ENSTTRP00000010373/1-843 GKMHCQKIAC VLPALMDGI- -QSHPHKPFY TV---GEKVT FSCSGGRSLE 701 750 ENSP00000322061/1-843 GPSAFLCGSS LKWSPEMKNA RCVQKENPLT QAVPKCQRWE KLQNSRCVCK ENSBTAP00000047583/1-843 GPSTFLCSSS LKWSPEVKDV QCVQREAPLT PKVPKCQPWE KLQNSRCVCK bmy_06106T0/1-783 GEDEVVDSMP L-WHRKCLNV SAGRN----- ---------- --------CR BACU014995/1-843 GPSTFLCGSS LKWSPEMKNV QCVQKDAPLA PEVPECQRWE KLQNSRCVCK ENSTTRP00000010373/1-843 GPSTFLCGSS LKWSPEMKNV QCVHKDAPLA PEVPECQRWE KLQNSRCVCK 751 800 ENSP00000322061/1-843 MPYECGPSLD VCAQDERSKR ILPLTVCKMH VLHCQGRNYT LTGRDSCTLP ENSBTAP00000047583/1-843 MPYECGSSLG VCARDERSKR ILPLTVCKMH VLQCQGRNYT VAGRESCTLP bmy_06106T0/1-783 IQ--DVSSLD VCARDERSKR ILPLTVCKMH VLQCQGRNYT VAGRETCTLP BACU014995/1-843 MPYECGSSLD VCARDERSKR ILPLTVCKMH VLQCQGRNYT VAGRESCTLP ENSTTRP00000010373/1-843 MPYECGSSLD VCARDERSKR ILPLTVCKIH VLQCQGRNYT VAGRESCTLP 801 850 ENSP00000322061/1-843 ASAEKACGAC PLWGKCDAES SKCVCREASE CEEEGFSICV EVNGKEQTMS ENSBTAP00000047583/1-843 ASAEKACGVC PLWEKCDAEG SECVCRAASE CEEAGFSVCV EVNGREQTMT bmy_06106T0/1-783 ASAEKACGAC PLWGKCDG-- ---------- ---------- ---------- BACU014995/1-843 ASAEKACGVC PLWGKCDAQS SKCVCRAASE CEETGFSVCV EANGRERTMT ENSTTRP00000010373/1-843 ASAEKACGVC PLWGKCDAQS SKCVCRAASE CEETGFSVCV EANGRERTMT 851 900 ENSP00000322061/1-843 ECEAGALRCR GQSISVTSIR PCAAETQ ENSBTAP00000047583/1-843 ECEAGVLRCR GLSISVTGIR PCAAEAA bmy_06106T0/1-783 ---------K GHFIFVT-IK MLK---- BACU014995/1-843 ECEAGVLRCQ GQIISVTSIR PCAAEAP ENSTTRP00000010373/1-843 ECEAGVLRCR GQSISVTSIR PCAAEAP