KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:58:17 2014 Check: 00 .. Name: ENSBTAP00000047628/1-379 Len: 379 Check: 1758 Weight: 1.00 Name: ENSP00000343619/1-272 Len: 379 Check: 7773 Weight: 1.00 Name: bmy_19818T0/1-272 Len: 379 Check: 5586 Weight: 1.00 Name: BACU003773/1-271 Len: 379 Check: 1829 Weight: 1.00 // 1 50 ENSBTAP00000047628/1-379 MATTGALGNY YVDSFLLGAD AADELGAGRY APGALGQPPR QAAALAEHPD ENSP00000343619/1-272 MATTGALGNY YVDSFLLGAD AADELSVGRY APGTLGQPPR QAATLAEHPD bmy_19818T0/1-272 MATTGALGNY YVDSFLLGAD AADELGAGRY APGALGQPPR QAAALAEHPD BACU003773/1-271 MATTGALGNY YVDSFLLGAD AADELGAGRY APGALGQPPR QAAALAEHPD 51 100 ENSBTAP00000047628/1-379 FSPCSFQSKA AVFGASWNPV HAAGPNAVPA AVYHHHHHHP YVHPQAPVAA ENSP00000343619/1-272 FSPCSFQSKA TVFGASWNPV HAAGANAVPA AVYHHHHHHP YVHPQAPVAA bmy_19818T0/1-272 FSPCSFQSKA AVFGASWNPV HAAGANAVPA AVYHHHHHHP YVHPQAPVAA BACU003773/1-271 FSPCSFQSKA AVFGASWNPV HAAGANAVPA AVYHHHHHHP YVHPQAPVAA 101 150 ENSBTAP00000047628/1-379 AAPDGRYMRS WLEPTPGALS FAGLPSSRPY GIKPEPLSAR RGDCPTLDTH ENSP00000343619/1-272 AAPDGRYMRS WLEPTPGALS FAGLPSSRPY GIKPEPLSAR RGDCPTLDTH bmy_19818T0/1-272 AAPDGRYMRS WLEPTPGALS FAGLPSSRPY GIKPEPLSAR RGDCPTLDTH BACU003773/1-271 AAPDGRYMRS WLEPTPGALS FAGLPSSRPY GIN-EPLSAR RGDCPTLDTH 151 200 ENSBTAP00000047628/1-379 TLSLTDYACG SPPVDREKQP SEGAFSENNP ENESGGDKPP IDPSKCLLLP ENSP00000343619/1-272 TLSLTDYACG SPPVDREKQP SEGAFSENNA ENESGGDKPP IDPNN----- bmy_19818T0/1-272 TLSLTDYACG SPPVDREKQP SEGAFSENNP ENESGGDKPP IDPSN----- BACU003773/1-271 TLSLTDYACG SPPVDREKQP SEGAFSENNP ENESGGDKPP IDPSN----- 201 250 ENSBTAP00000047628/1-379 GRPPPPRRPP GSAGPPAFSG ACLRLRWEPP EQRPGARSCC LGSLLGWGPP ENSP00000343619/1-272 ---------- ---------- ---------- ---PAA---- -----NW--L bmy_19818T0/1-272 ---------- ---------- ---------- ---PAA---- -----NW--L BACU003773/1-271 ---------- ---------- ---------- ---PAA---- -----NW--L 251 300 ENSBTAP00000047628/1-379 SPESSDKPAC RASGEGRRRL PGEGAGQALR DDPRPGDPLL GLPGTKTEIL ENSP00000343619/1-272 HARSTRKKRC ---------- ---------- --PYTKHQTL EL---EKEFL bmy_19818T0/1-272 HARSTRKKRC ---------- ---------- --PYTKHQTL EL---EKEFL BACU003773/1-271 HARSTRKKRC ---------- ---------- --PYTKHQTL EL---EKEFL 301 350 ENSBTAP00000047628/1-379 WARFFESNAS EKAFCAARLS GSGGSNCSPG SLTRDSGEDG RFSPLLASAS ENSP00000343619/1-272 FNMYL---TR DRRYEVARLL NLTERQV--- ---------- ---------- bmy_19818T0/1-272 FNMYL---TR DRRYEVARLL NLTERQV--- ---------- ---------- BACU003773/1-271 FNMYL---TR DRRYEVARLL NLTERQV--- ---------- ---------- 351 400 ENSBTAP00000047628/1-379 GGVNPAQDAA AGDRDARVPV LDYSNKLEK ENSP00000343619/1-272 -------KIW FQNRRMKMKK INKDRAKDE bmy_19818T0/1-272 -------KIW FQNRRMKMKK INKDRAKDE BACU003773/1-271 -------KIW FQNRRMKMKK INKDRAKDE