KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:58:24 2014 Check: 00 .. Name: ENSP00000356104/1-502 Len: 505 Check: 4670 Weight: 1.00 Name: ENSBTAP00000047683/1-503 Len: 505 Check: 4967 Weight: 1.00 Name: bmy_02379T0/1-474 Len: 505 Check: 3649 Weight: 1.00 Name: ENSTTRP00000014782/1-502 Len: 505 Check: 954 Weight: 1.00 // 1 50 ENSP00000356104/1-502 MAQRCVCVLA LVAMLLLVFP TVSRSMGPR- -SGEHQRASR IPSQFSKEER ENSBTAP00000047683/1-503 MARPSVCLLA SLSALLLGIA AVSRSKGLR- -GTESQREPR IPSQFSQEQR bmy_02379T0/1-474 MARPYVCLLA LAAVLLLGIA TVSRSKGLR- -GKEHRRAPR IPSQFSQEER ENSTTRP00000014782/1-502 MARPYVCLLT LAAVLLLGIA AVSRSKGLRG KGKGHQRAPR IPSQFSQEER 51 100 ENSP00000356104/1-502 VAMKEALKGA IQIPTVTFSS EKSNTTALAE FGKYIHKVFP TVVSTSFIQH ENSBTAP00000047683/1-503 IAMKEALKGA IQIPTVSFSP KELNTTALAE FGEYIRKVFP TVFHTSFIRH bmy_02379T0/1-474 VAMKEAL--- ---------- ---------- ------KVFP TVFKTSFIRH ENSTTRP00000014782/1-502 VAMKEALKGA VQIPTVSFSP EELNTTALAQ FGEYIHKVFP TVFKTSFIQH 101 150 ENSP00000356104/1-502 EVVEEYSHLF TIQGSDPSLQ PYLLMAHFDV VPAPEEGWEV PPFSGLERDG ENSBTAP00000047683/1-503 EVVGNYSHLF TIKGSDPSMQ PYILLAHIDV VPAPDKGWDV PPFSGLERDG bmy_02379T0/1-474 EAVGEYSHLF TVQGSDPSLQ PYMLLAHIDV VPAPDEGWDV PPFSGLESDG ENSTTRP00000014782/1-502 EAVGEYSHLF TVQGSDPSLQ PYMLLAHIDV VPAPDEGWDV PPFSGLESDG 151 200 ENSP00000356104/1-502 IIYGRGTLDD KNSVMALLQA LELLLIRKYI PRRSFFISLG HDEESSG-TG ENSBTAP00000047683/1-503 FIYGRGTLDN KNSLMAILQA LELLLIRNYI PRRSFFIALG HDEEISGING bmy_02379T0/1-474 FIYGRGTLDN KNSLMAILQA LELLLIRNYI PRRSFFIALG HDEEVSGVNG ENSTTRP00000014782/1-502 FIYGRGTLDN KNSLMAILQA LELLLIRNYI PRRSFFIALG HDEEVSGVKG 201 250 ENSP00000356104/1-502 AQRISALLQS RGVQLAFIVD EGGFILDDFI PNFKKPIALI AVSEKGSMNL ENSBTAP00000047683/1-503 AQKISALLQA RGVQLAFVVD EGSFILDGFI PYLKKPFAMV SVSEKGAINL bmy_02379T0/1-474 AQKISALLQA RGIQLAFIVD EGSFILDGFI PNLQKPFAMV SVSEKGAINL ENSTTRP00000014782/1-502 AQKISALLQA RGIQLAFIVD EGSFILDGFI PNLQKPFAMV SVSEKGAIDL 251 300 ENSP00000356104/1-502 MLQVNMTSGH SSAPPKETSI GILAAAVSRL EQTPMPIIFG SGTVVTVLQQ ENSBTAP00000047683/1-503 MLQVNTTTGH SSAPPKETSI GILAAAVSRL EQTPMPNMFG SGPLMTAVEQ bmy_02379T0/1-474 MLQVNMTPGH SSAPPKETSI GILAAAVSRL EQTPMPNMFG GGPLKMALQQ ENSTTRP00000014782/1-502 MLQVNMTPGH SSAPPKETSI GILAAAVSR- EQTPM-NMFG GGPFKMALQQ 301 350 ENSP00000356104/1-502 LANEFPFPVN IILSNPWLFE PLISRFMERN PLTNAIIRTT TALTIFKAGV ENSBTAP00000047683/1-503 LANEFPFPTN IVLNNLWLFR PLVSRLMERN YITNSLVRTT TALTMFNAGV bmy_02379T0/1-474 LANEFPFPAN IVLSNLWLFQ PLVSRLMERN YITNALVRTT TALTMFNAGV ENSTTRP00000014782/1-502 LANEFPFPTN IVLSNLWLFQ PLVSRLMERN YITNALVRTT TALTMFNAGV 351 400 ENSP00000356104/1-502 KFNVIPPVAQ ATVNFRIHPG QTVQEVLELT KNIVADNRVQ FHVLSAFDPL ENSBTAP00000047683/1-503 KVNVIPTVAE AIINFRLHPA QTVQEVLKLA KDIVADDRVQ FHVLDAFDPL bmy_02379T0/1-474 KVNVIPPVAQ ATINFRIHPA QTVQEVLKLA KDIVADDRIQ FHXLNAFDPL ENSTTRP00000014782/1-502 KVNVIPPVAQ ATVNFRIHPA QTVQEVLKLA KDIVADDRIQ FHVLNA-DPM 401 450 ENSP00000356104/1-502 PVSPSDDKAL GYQLLRQTVQ SVFPEVNITA PVTSIGNTDS RFFTNLTTGI ENSBTAP00000047683/1-503 PISPSDDQAL GYQLLRQTIH SVFPEVNIVA PGTCIGNTDS RHYLNLTTGI bmy_02379T0/1-474 PVSPSDDQAL GYQLLRQTIQ SVFPEVNIVA PGTCIGNTDS RHYTNLTTGI ENSTTRP00000014782/1-502 PVSPSDDKAL GYQLLRQTIQ SVFPEVNIVA PGTCIGNTDS RHYTNFTTGI 451 500 ENSP00000356104/1-502 YRFYPIYIQP EDFKRIHGVN EKISVQAYET QVKFIFELIQ NADTDQEPVS ENSBTAP00000047683/1-503 YRFNPIYLQP QDFSSIHGIN EKISVQAYET QVKFVFEFIQ NGDTDEEPVP bmy_02379T0/1-474 YRFNPIYLQP QSFSSIHGIN EKISVQAYET QVKFIFEFIQ NADADPRPVP ENSTTRP00000014782/1-502 YRFNPIYLQP QSFSSIHGIN EKISVQAYET QVKFIFEFLQ NADADPRPVP 501 550 ENSP00000356104/1-502 HLHKL ENSBTAP00000047683/1-503 HLHEL bmy_02379T0/1-474 HLHEL ENSTTRP00000014782/1-502 HLHEL