KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:58:26 2014 Check: 00 .. Name: ENSP00000362863/1-255 Len: 255 Check: 9997 Weight: 1.00 Name: ENSBTAP00000047783/1-255 Len: 255 Check: 9301 Weight: 1.00 Name: ENSTTRP00000009908/1-249 Len: 255 Check: 2045 Weight: 1.00 Name: bmy_01406T0/1-211 Len: 255 Check: 5003 Weight: 1.00 Name: BACU003428/1-244 Len: 255 Check: 4052 Weight: 1.00 // 1 50 ENSP00000362863/1-255 MVSWMISRAV VLVFGMLYPA YYSYKAVKTK NVKEYVRWMM YWIVFALYTV ENSBTAP00000047783/1-255 MVSWIISRAV VLVFGMLYPA YYSYKAVKTK NVKEYVRWMM YWIVFALYTV ENSTTRP00000009908/1-249 ------GWAI QLVFGMLYPA YYSYKAVKTK NVKEYVRWMM YWIVFALYTV bmy_01406T0/1-211 ---------- ---------- ---------- --------MM YWIVFALYTV BACU003428/1-244 ---------- -LVFGMLYPA YYSYKAVKTK NVKEYVRWMM YWIVFALYTV 51 100 ENSP00000362863/1-255 IETVADQTVA WFPLYYELKI AFVIWLLSPY TKGASLIYRK FLHPLLSSKE ENSBTAP00000047783/1-255 IETVADQTVA WFPLYYELKI AFVIWLLSPY TRGASLIYRK FLHPLLSSKE ENSTTRP00000009908/1-249 TETVADQTVA WFPMYYELKI AFVIWLLSPY TKGASLIYRK FLHPLLSSKE bmy_01406T0/1-211 IETVADQTVA WFPLYYELKI AFVIWLLSPY TKGASLIYRK FLHPLLSSKE BACU003428/1-244 METVADQTVA WFPLYYELKI AFVIWLLSPY TKGASLIYRK FLHPLLSSKE 101 150 ENSP00000362863/1-255 REIDDYIVQA KERGYETMVN FGRQGLNLAA TAAVTAAVKS QGAITERLRS ENSBTAP00000047783/1-255 REIDDYIVQA KERGYETMVN FGRQGLNLAA TAAVTAAVKS QGAITERLRS ENSTTRP00000009908/1-249 REIDDYIVQA KERGYETMVN FGRQGLNLAA TAAVTAAVKS QGAITERLRS bmy_01406T0/1-211 REIDDYIVQA KERGYETMVN FGRQGLNLAA TAAVTAAVKS QGAITERLRS BACU003428/1-244 REIDDYIVQA KERGYETMVN FGRQGLNLAA TAAVTAAVKS QGAITERLRS 151 200 ENSP00000362863/1-255 FSMHDLTTIQ GDEPVGQRPY QPLPEAKKKS KPAPSESAGY GIPLKDGDEK ENSBTAP00000047783/1-255 FSMHDLTAIQ GDEPVGQRSY QPLPETKKKS KPGSGETAGY GIPLRDGDEK ENSTTRP00000009908/1-249 FSMHDLTAIQ GDEPVGQRPY QPLPETKKKS KPASGESPGD GIPLRDGDEK bmy_01406T0/1-211 FSMHDLTAIQ GDEPVGQRAY QPLPETKKKS KPASGESPG- -----DGDGK BACU003428/1-244 FSMHDLTAIQ GDEPVGQRAY QPLPETKKKS KPASGESPGD GIPLRDGDGK 201 250 ENSP00000362863/1-255 TDEEAEGPYS DNEMLTHKGL RRSQSMKSVK TTKGRKEVRY GSLKYKVKKR ENSBTAP00000047783/1-255 TDEEAEGPYS DDEMLTHKGL RRSQSMKSVK TVKGRKEVRY GSLKYKVKKR ENSTTRP00000009908/1-249 TDEEADGPYS DDEMLTHKGL RRSQSMKSVK TVKSRKEVRY GSLKYKVKKR bmy_01406T0/1-211 TDEEADGPYS DDEMLTHRGL RRSQSMKSVK TVKGRKEVRY GSLKYKVKKR BACU003428/1-244 TDEEADGPYS DDEMLTHRGL RRSQSMKSVK TVKGRKEVRY GSLKYKVKKR 251 300 ENSP00000362863/1-255 PQVYF ENSBTAP00000047783/1-255 PQVYF ENSTTRP00000009908/1-249 PQVYF bmy_01406T0/1-211 PQVYF BACU003428/1-244 PQVYF