KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:58:27 2014 Check: 00 .. Name: ENSP00000264220/1-517 Len: 540 Check: 3367 Weight: 1.00 Name: ENSBTAP00000047788/1-539 Len: 540 Check: 8634 Weight: 1.00 Name: ENSTTRP00000010359/1-517 Len: 540 Check: 2193 Weight: 1.00 Name: bmy_15134T0/1-474 Len: 540 Check: 745 Weight: 1.00 Name: BACU000664/1-474 Len: 540 Check: 346 Weight: 1.00 // 1 50 ENSP00000264220/1-517 MELEELGIRE ECGVFGCIAS GEWPTQLDVP HVITLGLVGL QHRGQESAGI ENSBTAP00000047788/1-539 MELEELGIRE ECGVFGCIAS GEWPTQLDVP HVVTLGLVGL QHRGQESAGI ENSTTRP00000010359/1-517 MELEELGIRE ECGVFGCIAS GEWPTQLDVP HVITLGLVGL QHRGQESAGI bmy_15134T0/1-474 ---------- ---------- ---------- ---------- ---------- BACU000664/1-474 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000264220/1-517 VTSDGSSVPT FKSHKGMGLV NHVFTEDNLK KLYVSNLGIG HTRYATTGKC ENSBTAP00000047788/1-539 VTSDGNSVPT FKTHKGMGLV NHVFTEDNLK KLYTSNLGIG HTRYATTGNC ENSTTRP00000010359/1-517 VTSDGNSIPT FKTHKGMGLV NHVFTEDNLK KLYTSNLGIG HTTYATKGNC bmy_15134T0/1-474 ---------- ------MGLV NHVFTEDNLK KLYTSNLGIG HTRYATTGNC BACU000664/1-474 ---------- ------MGLV NHVFTEDNLK KLYTSNLGIG HTRYATTGNC 101 150 ENSP00000264220/1-517 ELENCQPFVV ETLHGKIAVA HNGELVNAAR LRKKLLRHGI GLSTSSDSEM ENSBTAP00000047788/1-539 ELENCQPFVV ETLHGKIAVA HNGELVNAAR LRKKLLRHGI GLSTSSDSEM ENSTTRP00000010359/1-517 ELENCQPFVV ETLHGKIAVA HNGELVNAAR LRKKLLRHGI GLSTSSDSEM bmy_15134T0/1-474 ELENCQPFVV ETLHGKIAVA HNGELVNAAR LRKKLLRHGI GLSTSSDSEM BACU000664/1-474 ELENCQPFVV ETLHGKIAVA HNGELVNAAR LRKKLLRHGI GLSTSSDSEM 151 200 ENSP00000264220/1-517 ITQLLAYTPP QEQDDTPDWV ARIKNLMKEA PTAYSLLIMH RDVIYAVRDP ENSBTAP00000047788/1-539 ITQLLAYTPP QEQDDTPDWV ARIKNLMKEA PTAYSLLIMH KDVIYAVRDP ENSTTRP00000010359/1-517 ITQLLAYTPP QEQDDTPDWV ARIKNLMKEA PTAYSLIIMH RDVIYAVRDP bmy_15134T0/1-474 ITQLLAYTPP QEQDDTPDWV ARIKNLMKEA PTAYSLIIMH RDVIYAVRDP BACU000664/1-474 ITQLLAYTPP QEQDDTPDWV ARIKNLMKEA PTAYSLIIMH RDVIYAVRDP 201 250 ENSP00000264220/1-517 YGNRPLCIGR LIPVSDINDK EKKTSETEGW VVSSESCSFL SIGARYYREV ENSBTAP00000047788/1-539 YGNRPLCIGR LIPISDINDK GKKTSETEGW VVSSESCSFL SIGARYYREV ENSTTRP00000010359/1-517 YGNRPLCIGR LIPVSDINDK EKKSSETEGW VVSSESCSFL SIGARYYREI bmy_15134T0/1-474 YGNRPLCIGR LIPVSDINDK EKKSSETEGW VVSSESCSFL SIGARYYREI BACU000664/1-474 YGNRPLCIGR LIPVSDINDK EKKSSETEGW VVSSESCSFL SIGARYYREI 251 300 ENSP00000264220/1-517 LPGEIVEISR HNVQTLDIIS RSEGNPVAFC IFEYVYFARP DSMFEDQMVY ENSBTAP00000047788/1-539 LPGEIVEISR HKIQTLDIIP RSEGNAMAFC IFEYVYFARP DSIFENQMVY ENSTTRP00000010359/1-517 LPGEIVEISR HNIQTLDIIP RSEGNPMAFC IFEYVYFARP DSIFEDQMVY bmy_15134T0/1-474 LPGEIVEISR HNVQTLDIIP RSEGNPVAFC IFEYVYFARP DSIFEDQMVY BACU000664/1-474 LPGEIVEISR HNVQTLDIIP RSEGNPMAFC IFEYVYFARP DSIFEDQMVY 301 350 ENSP00000264220/1-517 TVRYRCGQQL AIEAPVDADL VSTVPESATP AALAYAGKCG LPYVEVLCKN ENSBTAP00000047788/1-539 TVRYRCGQQL AIEAPVDADL VSTVPESATP AALGYATKCG LPYVEVLCKN ENSTTRP00000010359/1-517 TVRYRCGLQL AIEAPVDADL VSTVPESATP AALGYAAKCE LPYVEVLCKN bmy_15134T0/1-474 TVRYRCGLQL AIEAPVDADL VSTVPESATP AALGYAAKCG LPYVEVLCKN BACU000664/1-474 TVRYRCGLQL AIEAPVDADL VSTVPESATP AALGYAAKCG LPYVEVLCKN 351 400 ENSP00000264220/1-517 RYVGRTFIQP NMRLRQLGVA KKFGVLSDNF KGKRIVLVDD SIVRGNTISP ENSBTAP00000047788/1-539 RYVGRTFIQP NMRLRQLGVA KKFGVLSDNF KGKRIVLVDD SIVRGNTISP ENSTTRP00000010359/1-517 RYVGRTFIQP NMRLRQLGVA KKFGVLSDNF KGKRIVLVDD SIVRGNTISP bmy_15134T0/1-474 RYVGRTFIQP NMRLRQLGVA KKFGVLSDNF KGKRIVLVDD SIVRGNTISP BACU000664/1-474 RYVGRTFIQP NMRLRQLGVA KKFGVLSDNF KGKRIVLVDD SIVRGNTISP 401 450 ENSP00000264220/1-517 IIKLLKESGA KEVHIRVASP PIKYPCFMGI NIPTKEELIA NKPEFDHLAE ENSBTAP00000047788/1-539 IIKLLKESGA KEVHIRVASP PIRYPCFMGI NIPTKEELIA NKPEFEHISD ENSTTRP00000010359/1-517 IIKLLKESGA KEVHIRVASP PIRYPCFMGI NIPTKEELIA NKPEFEHISD bmy_15134T0/1-474 IIKLLKESGA KEVHIRVASP PIRYPCFMGI NIPTKEELIA NKPEFEHISD BACU000664/1-474 IIKLLKESGA KEVHIRVASP PIRYPCFMGI NIPTKEELIA NKPEFEHISD 451 500 ENSP00000264220/1-517 YLGANSVVYL SVEGLVSSVQ EGIKFKKQKE KKHDIMIQEN GNGLECFEKS ENSBTAP00000047788/1-539 YLGANSVVYL SVEGLVSSVQ EG-TLKKQRV KKQDIAVQEN GNGLQCFENN ENSTTRP00000010359/1-517 HLGANSVVYL SVEGLVASVQ EGITFKKQKV KRQDIMVQEN GNGLECFEKN bmy_15134T0/1-474 HLGANSVVYL SVEGLVSSVQ EGITFKKQKV KRQDIMVQEN GNGMECFEKN BACU000664/1-474 HLGANSVVYL SVEGLVSSVQ EGITFKKQKV KRQDIMVQEN GNGLECFEKN 501 550 ENSP00000264220/1-517 G--------- ---------- ----HCTACL TGKYPVELEW ENSBTAP00000047788/1-539 GHCTKEDIMI QENENGLQCF EKNNHCTACL TGKYPVELEW ENSTTRP00000010359/1-517 G--------- ---------- ----HCTACL TGKYPVELEW bmy_15134T0/1-474 GHCTKEDVMV QENGNGLECF EKNDHCTACL TGKYPVELEW BACU000664/1-474 GHCTKEDVMV QENGNGLECF EKNDHCTACL TGKYPVELEW