KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:58:27 2014 Check: 00 .. Name: bmy_08305T0/1-233 Len: 254 Check: 6928 Weight: 1.00 Name: ENSP00000282185/1-220 Len: 254 Check: 6338 Weight: 1.00 Name: ENSBTAP00000047797/1-234 Len: 254 Check: 9491 Weight: 1.00 Name: BACU020116/1-221 Len: 254 Check: 9889 Weight: 1.00 Name: ENSTTRP00000012985/1-221 Len: 254 Check: 9538 Weight: 1.00 // 1 50 bmy_08305T0/1-233 MVEIDL---- -------SIT GIADEVPSAP E-KPRAKAAS GHLTGLRIYN ENSP00000282185/1-220 MEEDEFIGEK TFQRYCAEFI KHSQQIGDSW EWRPSKDCSD GYMCKIHF-- ENSBTAP00000047797/1-234 MEENEFFGEK TFQHYCAEFI KHSQKIGDGW EWRASKDCSD GYMCKTHF-- BACU020116/1-221 MEEDEFFGEE TFQHYCAEFI KHSQKIGDGW EWRTSKDCSD GYMCKTQF-- ENSTTRP00000012985/1-221 MEEDEFFGEE TFQHYCAEFI KHSQKIGDGW EWRTSKDCSD GYMCKTQF-- 51 100 bmy_08305T0/1-233 VEMVQGPEAG SLKPSSQTNH WSSQSPQYKQ WHGACFVAKM PFVAFKDFDS ENSP00000282185/1-220 -QIKNGSVMS HLGASTHGQT CLPMEEAF-- --------EL PLDDCEVIET ENSBTAP00000047797/1-234 -QVKNGTAVS HQGTSDHVQT FLPVEEAL-- --------DP PLDDLEVNET BACU020116/1-221 -QIKNRTAVS HRGTSARVQT CLPMEEAL-- --------EP PLDDFEVTET ENSTTRP00000012985/1-221 -QIKNGTAVS HRGTSARVQT CLPMEEAL-- --------EP PLDDFEVTEP 101 150 bmy_08305T0/1-233 RINMKIFIDM SIKPLNYHS- YKCPFGNLLS CVSKRIGHTK FLYQREL--- ENSP00000282185/1-220 AAASEVI--- ---KYEYHVL YSCSYQVPVL YFRASFLDGR PLTLKDIWEG ENSBTAP00000047797/1-234 TTAAEVI--- ---KYEYHVL YSCSYQVPVL YFRASFLDGR PLALKDIWEG BACU020116/1-221 TTATEVI--- ---KYEYHVL YSCSYQVPVL YFRASFLDGS PLALKDIWEG ENSTTRP00000012985/1-221 TTATEVI--- ---KYEYHVL YSCSYQVPVL YFRASFLDGS PLALKDIWEG 151 200 bmy_08305T0/1-233 ---GFDQRDR KPSVSSTANT THQIFKEVAW RGLKPGTILD MSSGYYKT-- ENSP00000282185/1-220 VHECYKMRLL QGPWDTITQQ EHPILGQ-PF FVLHPCKTNE FMTPVLKNSQ ENSBTAP00000047797/1-234 VHECYKMRLL QGPWDTITQQ EHPILGQ-PF FVLHPCKTSE FMTPVLKNSQ BACU020116/1-221 VHECYKTRLL HGPWDTITQQ EHPILGQ-PF FVLHPCKTNE FMTPVLKNSQ ENSTTRP00000012985/1-221 VHECYKTRLL HRPWDTITQQ EHPILGQ-PF FVLHPCKTNE FMTPVLKNSQ 201 250 bmy_08305T0/1-233 KFNRNVNYIT SWLSMVGPAV GLNLPLSYAR AAFQDEGNVD RQDSSIEPKS ENSP00000282185/1-220 KINKNVNYIT SWLSIVGPVV GLNLPLSYAK ATSQDERNVP ---------- ENSBTAP00000047797/1-234 KINRNVNYIT SWLSMVGPAV GLNLPLSYAT AASQDEGNVD GQDSSIERKS BACU020116/1-221 KFNRNVNYIT SWLSMVGPAV GLNLPLSYAR AAFQDEGNVD R--------- ENSTTRP00000012985/1-221 KINRNVNYIT SWLSMVGPAV GLNLPLSYAR AAFQDEGNVD R--------- 251 300 bmy_08305T0/1-233 LEEL ENSP00000282185/1-220 ---- ENSBTAP00000047797/1-234 LEEH BACU020116/1-221 ---- ENSTTRP00000012985/1-221 ----