KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:58:29 2014 Check: 00 .. Name: bmy_14785T0/1-640 Len: 663 Check: 7498 Weight: 1.00 Name: ENSBTAP00000047885/1-420 Len: 663 Check: 3118 Weight: 1.00 Name: ENSTTRP00000004105/1-262 Len: 663 Check: 9832 Weight: 1.00 Name: ENSP00000437590/1-544 Len: 663 Check: 4844 Weight: 1.00 Name: BACU009007/1-202 Len: 663 Check: 3321 Weight: 1.00 // 1 50 bmy_14785T0/1-640 MAAIDLCPIW ALPTQDSACF YVRNTEGERI VPGFPATWLQ GPVSFKDVAV ENSBTAP00000047885/1-420 MAATDLSSIW ALPAQDSACF YMRNTKGERI VPGFPATWLQ GPMSFKDVAV ENSTTRP00000004105/1-262 ---------- ---------- ---------I VPGFPATWLQ GPVSFEDVTV ENSP00000437590/1-544 MAVMDLSSPW ALTKQDSACF HLRNAEEERM IAVFLTTWLQ EPMTFKDVAV BACU009007/1-202 ---------- ---------- ---------- ---------- ---------- 51 100 bmy_14785T0/1-640 EFTQEEWMML DSAQRSMYRD VMLENYVNLT LVEYQLCK-P VISLSGQEDI ENSBTAP00000047885/1-420 EFTQEEWMML DSAQRSMYRD MMLENYINLT LVEYQLCK-P VISLSGQEDI ENSTTRP00000004105/1-262 EFTQEEWVLL DSAQRSMYRD VMLENYMNLT LVEYQLCK-P VISLSGQEDI ENSP00000437590/1-544 EFTQEEWMML DSAQRSLYRD VMLENYRNLT SVEYQLYRLT VISPLDQEEI BACU009007/1-202 ---------- ---------- ---------- ---------- ---------- 101 150 bmy_14785T0/1-640 RTVKRRIPQG TCPDWEIQLK TKESTSNQNI LGGKSSSGKK MIRFTMDDWS ENSBTAP00000047885/1-420 RTVKSRIRQG TCPDWEIQFK TKESTYNQNI LGEKSSGGMK IIRFTMDDWS ENSTTRP00000004105/1-262 RTVKRRIPQG TCLDWEIQLK TKESTSNQNI FGGKSSSGKK MIRFTTDDWS ENSP00000437590/1-544 RNMKKRIPQA ICPDQKIQPK TKESTV-QKI LWEEPSNAVK MIKLTMHNWS BACU009007/1-202 ---------- ---------- ---------- ---------- ---------- 151 200 bmy_14785T0/1-640 PTLRADWECH KIRKQHKIPE GILRQVTFTQ KKGASQERLY DYHELEEDSK ENSBTAP00000047885/1-420 STLKEDWECG RIRKQHKIPE GILRQVTFTQ KKTTSQERLF DYHELEENSK ENSTTRP00000004105/1-262 PTLRADWE-- ---------- ---------- ---------- ---------- ENSP00000437590/1-544 STLREDWECH KIRKQHKIPG GHWRQMIYAP KKTVPQELFR DYHELEENSK BACU009007/1-202 ---------- ---------- ---------- ---------- ---------- 201 250 bmy_14785T0/1-640 LRSKL-FSKR VSISKHCHKC YLDIECLKHN SILNNYEKNS YVNSQYSNLV ENSBTAP00000047885/1-420 LRSTLVFSRR VSTSKHCHKC YLNIECLKHN PILNNFENIS VSERLCESHE ENSTTRP00000004105/1-262 ---------- ---------- ---------- ---------- ---------- ENSP00000437590/1-544 LGSKLIFSQS IFTSKHCQKC YSEIGCLKHN SIINNYVKNS ISEKLYESHE BACU009007/1-202 ---------- ---------- ---------- ---------- ---------- 251 300 bmy_14785T0/1-640 LKKKKITRLE RMELRSLKAG VREAGGKSQH FSMRKPKSLQ VKMFKLDVYP ENSBTAP00000047885/1-420 F-DRTLWHLE RTQ------- ---------- ---------- ---------- ENSTTRP00000004105/1-262 ---------- ---------- ---------- ---------- ---------- ENSP00000437590/1-544 C-DTTLWHFQ RNQTVQKEYT YSKHGMHFTH NMFPVPNNLH MA-------- BACU009007/1-202 ---------- ---------- ---------- ---------- ---------- 301 350 bmy_14785T0/1-640 FTCIEMVTLC IAIISVKQIG TEIMYYTNPR EEKLLQEEAK QKNACHFLLV ENSBTAP00000047885/1-420 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000004105/1-262 ---------- ---------- ---------- ---------- ---------- ENSP00000437590/1-544 ----QNACEC NKDETLCHQS SLKKQGQTHT EKKHECNQCG KAFKRISNLT BACU009007/1-202 ---------- ---------- ---------- ---------- ---------- 351 400 bmy_14785T0/1-640 PILKHSLKNM EYKFSQATYS PPPDTSYGEG RYLNSDSEFG GMWALQNGRK ENSBTAP00000047885/1-420 ------IAQR VYTYCKC--- ---------D THFKHNNML- --------PI ENSTTRP00000004105/1-262 ---------- ---------- ---------- ---------- ---------- ENSP00000437590/1-544 LYKKSHMGEK QYECKEC--- ---------G KVFNDSSTL- --------RR BACU009007/1-202 ------MGEK QYECKEC--- ---------R KVFNDSSTL- --------RR 401 450 bmy_14785T0/1-640 LDFQQKLERL WLCRQGPRRT ERGRRSWRGE RRADARAGAR APHPPPSSRG ENSBTAP00000047885/1-420 CNNFLMVENS YECNK-NKIF CH-------- ---------- ---------- ENSTTRP00000004105/1-262 ---------- --CH------ NQ-------- ---------- ---------- ENSP00000437590/1-544 HVRTHTGEKP YECNQCGKAF SQ-------- ---------- ---------- BACU009007/1-202 HVRTHTGEKP YECNQCGKAF SQ-------- ---------- ---------- 451 500 bmy_14785T0/1-640 SGTPATAPSP PRRGLRAWAR PAPPVPPPLT GPQLGRLLRA AGRATKASRA ENSBTAP00000047885/1-420 ---------- -HSSLEQQEQ -TPTDEK-HE CNQCGKTFKR ISNLILHKGS ENSTTRP00000004105/1-262 ---------- -KSSLKVHVR -THTGEKPYE CNHCGKSFGT SSYLIVHKRI ENSP00000437590/1-544 ---------- -KTSLKAHMR -THTGEKPYE CNQCGKSFGT SSYLIVHKRI BACU009007/1-202 ---------- -KTSLKVHMR -THTGEKPYE CNHCGKSFGT SSYLTVHKRI 501 550 bmy_14785T0/1-640 RGRATAPGPP GPGGDRLGQG GPFPYLGPRK QRSRLCDGDP APASRKLRLP ENSBTAP00000047885/1-420 ---------- ---------- ----HMSEKQ YECKEC-GKV FNDSSTLR-- ENSTTRP00000004105/1-262 ---------- ---------- ----HSGEKL YECNDC-GKT FNTSSHLKVH ENSP00000437590/1-544 ---------- ---------- ----HTGEKL YECSEC-GKA FNTSSHLKVH BACU009007/1-202 ---------- ---------- ----HSGEKL YECSDC-GKA FNTSSHLKVH 551 600 bmy_14785T0/1-640 EPQRP----- ---------- ------TATR PRTSDSSFPG PTAASARRGQ ENSBTAP00000047885/1-420 ---------- ---------- ------RHVR THTGEKPYEC NQ---CGKAF ENSTTRP00000004105/1-262 KKTHTGENL- ---------- ------MHVR THTGEKPYEC KE---CRKTF ENSP00000437590/1-544 KKIHTGENVY ECSDCGKVFS GVSSLRMHIR THTGEKPYEC KE---CRKAF BACU009007/1-202 KKTHTGENLY ECTDCGKVFS GLSSLRMHVR THTGEKPYEC KE---CRKTF 601 650 bmy_14785T0/1-640 SARPTPPTTP RTPRARDREN GGLRQLHYPG STAASACGLA LHARTTTPRT ENSBTAP00000047885/1-420 SQKTSLKVHV RT-HTGENLM SVII----VE NPLAQVLTL- ---------- ENSTTRP00000004105/1-262 SVSSSLRRHV RT-HTGEKPY GCIQ----CG KTFSQNSSLT IH-------- ENSP00000437590/1-544 SVSSSLRRHV RI-HTGEKPY ECIQ----CG KAFSQSSSLI IHKRIHTERE BACU009007/1-202 SVSSSLRRHV RT-HTGEKPY GCIQ----CG KTFSQNSSLT IHKRIHTGRE 651 700 bmy_14785T0/1-640 DCGSSLSIQD LQP ENSBTAP00000047885/1-420 ---------- --- ENSTTRP00000004105/1-262 ---------- --- ENSP00000437590/1-544 TL-------- --- BACU009007/1-202 TL-------- ---