KEY:
    ENSP* - Homo sapiens (Human)
    ENSBTA* - Bos taurus (Cow)
    ENSTTR* - Tursiops truncatus (Dolphin)
    bmy_* - Balaena mysticetus (Bowhead whale)
    BACU* - Balaenoptera acutorostrata (Minke whale)

Copy from below the line for a valid .msf file.

----------------------------------------------------------------------------------
                
NoName   MSF: 4  Type: P  Thu May 15 17:58:29 2014  Check: 00 ..

 Name: ENSP00000367185/1-251     Len:    261  Check:  3280  Weight:  1.00
 Name: ENSBTAP00000047892/1-228  Len:    261  Check:  7480  Weight:  1.00
 Name: bmy_15968T0/1-143         Len:    261  Check:  7744  Weight:  1.00
 Name: ENSTTRP00000006698/1-245  Len:    261  Check:  6578  Weight:  1.00

//


                          1                                                   50
ENSP00000367185/1-251     MAMGVPRVIL LCLFGAALCL TGSQALQCYS FEHTYFGPFD LRAMKLPSIS 
ENSBTAP00000047892/1-228  --CQFVRPLI HSFLLVSLLS PGSQAQQCYS FQHIYFGPFD LSNVNFSNVS 
bmy_15968T0/1-143         ---------- ---------- ---------- ---------- ---MKFLNVS 
ENSTTRP00000006698/1-245  MAMGGPRATL LCLFGAVLCL TGSQALQCYS FQHFYFGPFD LSGMKFLNVS 


                          51                                                 100
ENSP00000367185/1-251     CPHECFEAIL SLDTGYRAPV TLVRKGCWTG PPAGQTQSNA DALPPDYSVV 
ENSBTAP00000047892/1-228  CPQGCSEAVL SLTL------ --IRKGKGTG HGDGG----- -----ETSAR 
bmy_15968T0/1-143         CLLRCSEAVL SLNT------ ---------- ---------- ---------- 
ENSTTRP00000006698/1-245  CLLGCSEAVL SLNTGYRAS- TMVQKGCWTG PATGQMQWND KALPPNYSVV 


                          101                                                150
ENSP00000367185/1-251     RGCTTDKCNA HLMTHDALPN LSQAPDPPTL SGAECYACIG VHQDDCAIGR 
ENSBTAP00000047892/1-228  WG-GKRVC-- -------LHA LLAAPNPPTL SGTECYACVG IHPEDCTPEK 
bmy_15968T0/1-143         ---------- ---------- ---APNPPTL SGAKCYSCVG IHPEDCTPEK 
ENSTTRP00000006698/1-245  RG-GTDLCNA NFQTHDSLAN LGRAPNPPTL SGPKCYS-VG IHPEDCTPEK 


                          151                                                200
ENSP00000367185/1-251     SRRVQCHQDQ TACFQGNGRM TVGNFSVPVY IRTCHRPSCT TEGTTSPWTA 
ENSBTAP00000047892/1-228  SRRVQCHQDQ SVCFQGNGRM TLGNFSAPVY IRTCQRPSCT IKGTTSPWTN 
bmy_15968T0/1-143         SWRVQCHQDQ SICFQGNGSM TFGNFSVPVY IRTCHRPSCT IQGTTSPWTN 
ENSTTRP00000006698/1-245  FRRVQCHQDQ SICFQGNGSM TFGNFSVPVY IRTCHRPSCT TRGTTSPWTN 


                          201                                                250
ENSP00000367185/1-251     IDLQGSCCEG YLCNRKS--M TQPFTSASAT TPPRALQVLA LLLPVLL--- 
ENSBTAP00000047892/1-228  IDLQGSCCEG DLCNRDS--L TQPFTSASDT AAPRVPHVTV LLLVVSLLGG 
bmy_15968T0/1-143         IDLQGSCCEG HLCNKDSISL HQRLGHRASW GTPGHSPA-- ---------- 
ENSTTRP00000006698/1-245  IDLQGSCCEG HLCNKDS--- --QFTSASGT VPPGVPPVIV LLLMATL--- 


                          251                                                300
ENSP00000367185/1-251     ----LVGLSA - 
ENSBTAP00000047892/1-228  ALGGPLGLSS - 
bmy_15968T0/1-143         ----PHGFPA G 
ENSTTRP00000006698/1-245  ----LVGLSS -