KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:58:29 2014 Check: 00 .. Name: BACU017104/1-337 Len: 407 Check: 5256 Weight: 1.00 Name: ENSBTAP00000047901/1-231 Len: 407 Check: 3319 Weight: 1.00 Name: ENSP00000263202/1-307 Len: 407 Check: 5467 Weight: 1.00 Name: bmy_02450T0/1-347 Len: 407 Check: 3389 Weight: 1.00 Name: ENSTTRP00000014167/1-337 Len: 407 Check: 3244 Weight: 1.00 // 1 50 BACU017104/1-337 MYTSDEGVSL RFQWALGLVR ERKCGLLPPE SSMAATEAGS SPSTCSTTRF ENSBTAP00000047901/1-231 MFSFNM---- -FDHPIPRVF QNRF------ ---------S TQYRCFSVSM ENSP00000263202/1-307 MFSFNM---- -FDHPIPRVF QNRF------ ---------S TQYRCFSVSM bmy_02450T0/1-347 MFSFNM---- -FDHPIPRVF QNRF------ ---------S TQYRCFSVSM ENSTTRP00000014167/1-337 MFSFNM---- -FDHPIPRVF QNRF------ ---------S TQYRCFSVSM 51 100 BACU017104/1-337 PGSSRTASPH STAASPCPCS RGLMTVIMPP SALDQLSRLN ITYPMLFKLT ENSBTAP00000047901/1-231 LAGPNDRSDV EKGGK----- -----IIMPP SALDQLSRLN ITYPMLFKLT ENSP00000263202/1-307 LAGPNDRSDV EKGGK----- -----IIMPP SALDQLSRLN ITYPMLFKLT bmy_02450T0/1-347 LAGPNDRSDV EKGGK----- -----IIMPP SALDQLSRLN ITYPMLFKLT ENSTTRP00000014167/1-337 LAGPNDRSDV EKGGK----- -----IIMPP SALDQLSRLN ITYPMLFKLT 101 150 BACU017104/1-337 NKNSDRMTHC GVLEFVADEG ICYLPH---- ---------- ---------- ENSBTAP00000047901/1-231 NKNSDRVTHC GVLEFVADEG ICYLPH---- ---------- ---------- ENSP00000263202/1-307 NKNSDRMTHC GVLEFVADEG ICYLPH---- ---------- ---------- bmy_02450T0/1-347 NKNSDRMTHC GVLEFVADEG ICYLPH---- ---------- ---------- ENSTTRP00000014167/1-337 NKNSDRMTHC GVLEFVADEG ICYLPHWVVR RALGSGLVAE VLGSVSFPRP 151 200 BACU017104/1-337 ------WMMQ NLLLEEGGLV QVESVNLQVA TYSKFQPQSP DFLDITNPKA ENSBTAP00000047901/1-231 ------WMMQ NLLLEEGGLV QVESVNLQVA TYSKFQPQSP DFLDITNPKA ENSP00000263202/1-307 ------WMMQ NLLLEEGGLV QVESVNLQVA TYSKFQPQSP DFLDITNPKA bmy_02450T0/1-347 ------WMMQ NLLLEEGGLV QVESVNLQVA TYSKFQPQSP DFLDITNPKA ENSTTRP00000014167/1-337 LCGFGVWMMQ NLLLEEGGLV QVESVNLQVA TYSKFQPQSP DFLDITNPKA 201 250 BACU017104/1-337 V--------- ---------- ---------L ENALRNFACL TTGDVIAINY ENSBTAP00000047901/1-231 V--------- ---------- ---------L ENALRNFACL TTGDVIAINY ENSP00000263202/1-307 V--------- ---------- ---------L ENALRNFACL TTGDVIAINY bmy_02450T0/1-347 VYPSEVERVP LSRGGLCQLV AGDSEPLVGL ENALRNFACL TTGDVIAINY ENSTTRP00000014167/1-337 V--------- ---------- ---------L ENALRNFACL TTGDVIAINY 251 300 BACU017104/1-337 NEKIYELRVM ETKPDRAVSI IECDMNVDFD APLGYKEPER QAQHEEAAEG ENSBTAP00000047901/1-231 NEKIYELRVM ETKPDKAVSI IECDMNVDFD APLGYKEPER QAQHEESAEG ENSP00000263202/1-307 NEKIYELRVM ETKPDKAVSI IECDMNVDFD APLGYKEPER QVQHEESTEG bmy_02450T0/1-347 NEKIYELRVM ETKPDRAVSI IECDMNVDFD APLGYKEPER QAQHEEAAEG ENSTTRP00000014167/1-337 NEKIYELRVM ETKPDRAVSI IECDMNVDFD APLGYKEPER QAQHEEAAEG 301 350 BACU017104/1-337 EADHSGYAGE LGFRAFSGSG NRLDGKKKGV EPSPSPIKPG DIKRGIPNYE ENSBTAP00000047901/1-231 ETDHSGYTGE LGFRVSAA-- ---------- ---------- ---------- ENSP00000263202/1-307 EADHSGYAGE LGFRAFSGSG NRLDGKKKGV EPSPSPIKPG DIKRGIPNYE bmy_02450T0/1-347 EADHSGYAGE LGFRAFSGSG NRLDGKKKGV EPSPSPIKPG DIKRGIPNYE ENSTTRP00000014167/1-337 EADHSSYAGE LGFRAFSGSG NRLDGKKKGV EPSPSPIKPG DIKRGIPNYE 351 400 BACU017104/1-337 FKLGKITFIR NSRPLVKKVE E--------- ---DEAGGRF VAFSGEGQSL ENSBTAP00000047901/1-231 ---------- ---------- ---------- ---------- ---------- ENSP00000263202/1-307 FKLGKITFIR NSRPLVKKVE E--------- ---DEAGGRF VAFSGEGQSL bmy_02450T0/1-347 FKLGKITFIR NSRPLVKKVE EEFLKMVFSL HTQDEAGGRF VAFSGEGQSL ENSTTRP00000014167/1-337 FKLGKITFIR NSRPLVKKVE E--------- ---DDAGGRF VAFSGEGQSL 401 450 BACU017104/1-337 RKKGRKP ENSBTAP00000047901/1-231 ------P ENSP00000263202/1-307 RKKGRKP bmy_02450T0/1-347 RKKGRKP ENSTTRP00000014167/1-337 RKKGRKP