KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:58:30 2014 Check: 00 .. Name: ENSP00000317614/1-1074 Len: 1085 Check: 5795 Weight: 1.00 Name: ENSBTAP00000047914/1-580 Len: 1085 Check: 2438 Weight: 1.00 Name: bmy_14635T0/1-1082 Len: 1085 Check: 111 Weight: 1.00 Name: BACU014354/1-1082 Len: 1085 Check: 288 Weight: 1.00 // 1 50 ENSP00000317614/1-1074 -----MKDIG QQLYTTHLNG GHNSLTMSPK QPDANGAPRP NRQEAQTLLY ENSBTAP00000047914/1-580 ---------- ---------- ---------- ---------- ---------- bmy_14635T0/1-1082 MQMKKMKDSG QQLWTTQVDD GHNSLTMSLK QPNANRATRP DRQEAQTLLY BACU014354/1-1082 MQMKKMKDSG QQLWTTQVDD GHNSLTMSLK QPNANRATRP DRQEAQTLLY 51 100 ENSP00000317614/1-1074 QGSEAEAAMM TIATCAKCKS VHKISLQDLQ KGTG---KDG MYVCFQCSLG ENSBTAP00000047914/1-580 ---------- ---------- ---------- ---------- ---------- bmy_14635T0/1-1082 QVSEAEAATM TVATCVKCKS VYKIPLQDLK KDTGQSQKED KYVCFKCSLG BACU014354/1-1082 QVSEAEAATM TVATCVKCKS VYKIPLQDLK KDTGQSQKED KYVCFKCSLG 101 150 ENSP00000317614/1-1074 AAPPNFHFVS NNSSATHVGN KTENFSSSVN SKFKVRNFKP GKYYCDKCRF ENSBTAP00000047914/1-580 ---------- ---------- ---------- HKFKVRNFKP GKYYCDKCRF bmy_14635T0/1-1082 VAPPHFHFVN NNHSATHIGN KPETISSSVN NKFKVRNFKP GKYYCDKCRF BACU014354/1-1082 VAPPHFHFVN NNHSATHIGN KPETISSSVN NKFKVRNFKP GKYYCDKCRF 151 200 ENSP00000317614/1-1074 STKDPLQYKK HTLQHEEIKF ICSHCSYISY TKGEFQRHLV KHTGIFPYQC ENSBTAP00000047914/1-580 STKDPLQYKK HTLQHEEIKF VCSHCGCISY TKGEFQRHLV KHTGVFPYRC bmy_14635T0/1-1082 STKDPLQYKK HTLQHEEIKF ICSHCSYISY TKGEFQRHLV KHTGIFPYQC BACU014354/1-1082 STKDPLQYKK HTLQHEEIKF ICSHCSYISY TKGEFQRHLV KHTGIFPYQC 201 250 ENSP00000317614/1-1074 EYCDYGAIRN DYIVKHTKRV HERAGAKRPV KAVAKLEPKR TGTSKQNPEL ENSBTAP00000047914/1-580 EYCDYGAIRN DYIVKHRRRV HEKTGAKRPP KAIARLEPKR ISASKQNPEL bmy_14635T0/1-1082 EYCDYGAIRN DYIVKHRKRV HEKAGGKRLP KTIAKLEPKR ISASKQNPEL BACU014354/1-1082 EYCDYGAIRN DYIVKHRKRV HEKAGGKRLP KTIAKLEPKR ISASKQNPEL 251 300 ENSP00000317614/1-1074 LKASNPRTTF QNKWSDQLSG FSLHANKDKM HNIMLLPEPK EYQKDVVCIP ENSBTAP00000047914/1-580 SKTSSPRTAF QNKLS----- ---------- -------ESK DYQKDVVCIP bmy_14635T0/1-1082 LKASSPRTAF QNKLSDQLSR FSLHSNKDRM HNIMLLPESK EYQKDVVCIP BACU014354/1-1082 LKASSPRTAF QNKLSDQLSR FSLHSNKDRM HNIMLLPESK EYQKDVVCIP 301 350 ENSP00000317614/1-1074 NKMTLSEPNE V-NLFENKNV EVEVLSPAKE PVQPGMPLTV VAPAELVVPA ENSBTAP00000047914/1-580 HKGALSEPTE VINLLENKSV EVEVLSPSKE PVQPGMPLTV VAPAELVVPA bmy_14635T0/1-1082 NKVTLSEPNE V-NLFENKSV EVEVLSPAKE PVQPGMPLTV VAPAELIVPA BACU014354/1-1082 NKVTLSEPNE V-NLFENKSV EVEVLSPAKE PVQPGMPLTV VAPAELIVPA 351 400 ENSP00000317614/1-1074 NCLAQLIDVK VVNGTQQLVL KLFPLEENNC LEAGRDNGGN SERMVKEKGS ENSBTAP00000047914/1-580 NCLAQLMDVK VVNGTQQLVL KLFPLEETNS LDAGGGDGGS SER------- bmy_14635T0/1-1082 NCLAQLIDVK VVNGTQQLVL KLFPLEENNC LAAGGGDGGN SEHVTKEKDS BACU014354/1-1082 NCLAQLIDVK VVNGTQQLVL KLFPLEENNC LAAGGGDGGN SEHVTKEKDS 401 450 ENSP00000317614/1-1074 NEQEKVLSAE KTKSLTVDGN VGKLVGIDSF QPSVQKQLKN VKWVRSYDFI ENSBTAP00000047914/1-580 ---------- ---------- ---------- ---------- ---------- bmy_14635T0/1-1082 SEQEKMASAE QTKSLRIEGN VGKLAGIHNL QSSVQKQLKN VKWVRSYDFF BACU014354/1-1082 REQEKMASAE QTKSLMIERN VGKLAGIHNL QSSVQKQLKN VKWVRSYDFF 451 500 ENSP00000317614/1-1074 MPNSSVHNNG KSFINSETIE DFQKKNNLYP HRTAFPSVAL KGHSLASVFK ENSBTAP00000047914/1-580 ---------- ---------- GSKKKGYTYP HRAALPSIAF KGHS------ bmy_14635T0/1-1082 TSNSSVHSGG ESFLNPDRVE GLQKKGYTYP QRTALPSIAL KGHSPSSLIK BACU014354/1-1082 TSNSSVHSGG ESFLNPDRVE GLQKKGYTYP QRTALPSIAL KGHSPSSLIK 501 550 ENSP00000317614/1-1074 NSVLRSLGAA SNPFPYKAAV CFAESGRNLH SSSQQLLPFA ASPATCSFSG ENSBTAP00000047914/1-580 ---------- ---------- ---------- ---------- ---------- bmy_14635T0/1-1082 NGILSGLGTT SNSFPYKAAV SFTDDGRNLH SDSQQLFPLA ASPATISFSG BACU014354/1-1082 NGILSGLGTT SNSFPCKAAV SFTEDGRNLH SDSQQLFPLA ASPATVSFSG 551 600 ENSP00000317614/1-1074 EKGLLPVSEN DLESTSKVNI PVKVVSSNRK QEDNQTEEHK AVSTVGQISS ENSBTAP00000047914/1-580 -----PLSLN DLGSRNEISL PAKTVTPPRK LQDNQTQEYK ---------- bmy_14635T0/1-1082 EKDSLPLSKK DMESRNEISF PVKMAPPNKK LKHNQTQEHK AVSNTGQISS BACU014354/1-1082 EKDSLPLSKK DVESRNEISF PVKMAPPNKK LKHNQTQEHK AVSNTGQISS 601 650 ENSP00000317614/1-1074 QHKSEYLHIN ITGED--RSQ QPGDKPLELK NSERTNNTND GPVISSVFSL ENSBTAP00000047914/1-580 ---------- ---------- ---DKPLELK NPDQTNDPFD GPVISSVFSL bmy_14635T0/1-1082 QPKSEYLHIN ITGEDGIRSQ QSGDKPLELK NSEKTNDSFE GPVISSVFSL BACU014354/1-1082 QPKSEYLHIN IAGEDGIRSQ QSGDKPLELK NSEKTNDSFE GPVISSVFSL 651 700 ENSP00000317614/1-1074 SSGSENVPEG IKWNSSTSKI KSIELLRRKI AQLIESCGKP SSLASNSAHR ENSBTAP00000047914/1-580 SSGSENVPEG VKWNSSTSKI KS-------- ---------- ---------- bmy_14635T0/1-1082 SSGSENVPEG VKWNSSTSKI KSIELLRRKI AQLIESCGKP SSLAASNAHR BACU014354/1-1082 SSGSENVPEG VKWNSSTSKI KSIELLRRKI AQLIESCGKP SSLAASNAHR 701 750 ENSP00000317614/1-1074 RSVGQASKGT SKATSEGIQE INVSLTGLGH STGTLQKPPN DGGITGNRQL ENSBTAP00000047914/1-580 ---RKASKVT SKSTPEGIQE INVSFTSAGY STGTLPRPQD AGGISE--QL bmy_14635T0/1-1082 HSVGKASKVT SKATSEGIQE INVSFTSTGY STGTLPKPQD DVGING--QL BACU014354/1-1082 HSVGKASKVT SKATSEGIQE INVSFTSTGY STGTLPKPQD DVGING--QL 751 800 ENSP00000317614/1-1074 THQQIYPHFA DGSNRKTKSR VARKAHVATP VLIPKGAVLR VLNSSENAHI ENSBTAP00000047914/1-580 AHQQAYPQLV EGSSGKTESR VTKKPHVATP VLIPKGAVLR VLNSSEDSQI bmy_14635T0/1-1082 THQQIYPHLV EGSSGKTESG VTRKPHLAPP VLIPKGAVLR VLNSSENSHI BACU014354/1-1082 THQQIYPHLV EGSSGKTESG VTRKPRLAPP VLIPKGAVLR VLNSSENSHI 801 850 ENSP00000317614/1-1074 IEATCEAPVS IPCSERQLIK PVPFCPVRQA DSDLQPLRSE RGPIDMSPNI ENSBTAP00000047914/1-580 IEATCEAPVN ITCTETQLIK PIPLCPMKRT DPDVQFLTSE SGPIDMSPNH bmy_14635T0/1-1082 IEATCEAPVS IPCSETQLIK PIPFCPVKQT DLDLQSSTSE SGPIDMSQNH BACU014354/1-1082 IEATCEAPVS IPCSETQLIK PIPFCPVKQT DLDLHSSTSE SGPIDMSQNH 851 900 ENSP00000317614/1-1074 ETPLRPKLRK ESAVCSTIHR KTGLLYGQQG SSELNKQGRL LSRSLSISRN ENSBTAP00000047914/1-580 DLSFRPKSRK ESAHCSTMPK KPGSMHGP-- ---------- ---------- bmy_14635T0/1-1082 DLSLWAKSRK ESANCSTMLK KTGLLHGQQG SSEMSKQGKL FSRSLPVSKN BACU014354/1-1082 DLSLWAKSRK ESANCSTMLK KTGLLHGQQG SSEMSKQGKL FSRSLPVSKN 901 950 ENSP00000317614/1-1074 KTKQVHLSRK KNKIQAEPSR CLKDPSIFQV ARQLRLIAAK PDQLIKCPRR ENSBTAP00000047914/1-580 ---------- ---------- --------QV ARQLRLIAAK PDQLIKCPRR bmy_14635T0/1-1082 KTKQVNSSKK KSKIQADPSR CFKDPSIFQV ARQLRLIAAK PDQLIKCPRR BACU014354/1-1082 KTKQVNSSKK KSKIQADPSR CFKDPSIFQV ARQLRLIAAK PDQLIKCPRR 951 1000 ENSP00000317614/1-1074 NQPVIVLNHP DVDSPEVTNV MKVINKYKGN VLKVVLSERT RCQLGIRRHH ENSBTAP00000047914/1-580 NQPVIVLNHP DVDSPEVSNV MKVINKYKGN VLKVVL---- ---------- bmy_14635T0/1-1082 NQPVIVLNHP DVDSPEVSNV MKVINKYKGN VLKVVLSERT RCQLGIRRHH BACU014354/1-1082 NQPVIVLNHP DVDSPEVSNV MKVINKYKGN VLKVVLSERT RCQLGIRRHH 1001 1050 ENSP00000317614/1-1074 VRLTYQNAEE ASQIKRQMML KMKLKKVHKN NYQVVDSLPD DSSQCVFKCW ENSBTAP00000047914/1-580 ---------- ---------- ---------- ---------- ---------- bmy_14635T0/1-1082 VRLTYQNVEE ANQIKRQMML KMKLKKVHKN NYQVVDSLPD DSSQCIFKCW BACU014354/1-1082 VRLTYQNVEE ANQIKRQMML KMKLKKVHKN NYQVVDSLPD DSSQCIFKCW 1051 1100 ENSP00000317614/1-1074 FCGRLYEDQE EWMSHGQRHL IEATRDWDVL SSKGK ENSBTAP00000047914/1-580 ---------- ---------- ---------- ----- bmy_14635T0/1-1082 FCGRLYEDQE EWMSHGQRHL IEATRDWDVL SSKGK BACU014354/1-1082 FCGRLYEDQE EWMSHGQRHL IEATRDWDVL SSKGK