KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:58:30 2014 Check: 00 .. Name: ENSTTRP00000004029/1-971 Len: 1020 Check: 1810 Weight: 1.00 Name: ENSBTAP00000047927/1-971 Len: 1020 Check: 5106 Weight: 1.00 Name: bmy_02922T0/1-1020 Len: 1020 Check: 5991 Weight: 1.00 Name: BACU011345/1-971 Len: 1020 Check: 6473 Weight: 1.00 // 1 50 ENSTTRP00000004029/1-971 ---------- ---------- ---------- ---------- ---------M ENSBTAP00000047927/1-971 ---------- ---------- ---------- ---------- ---------M bmy_02922T0/1-1020 MRPDHSLAAA PFCRGLNVRW SGSRGGYCRL RSAAEIPFSV PVSPRGSVAM BACU011345/1-971 ---------- ---------- ---------- ---------- ---------M 51 100 ENSTTRP00000004029/1-971 ELSDANLQTL TEYLKKTLDP DPAIRRPAEK FLESVEGNQN YPLLLLTLLE ENSBTAP00000047927/1-971 ELSDANLQTL TEYLKKTLDP DPAIRRPAEK FLESVEGNQN YPLLLLTLLE bmy_02922T0/1-1020 ELSDANLQTL TEYLKKTLDP DPAIRRPAEK FLESVEGNQN YPLLLLTLLE BACU011345/1-971 ELSDANLQTL TEYLKKTLDP DPAIRRPAEK FLESVEGNQN YPLLLLTLLE 101 150 ENSTTRP00000004029/1-971 KAQDNVIKVC ASVTFKNYIK RNWRIXXXXX XXXXXXXXXX XXXXXXXXXX ENSBTAP00000047927/1-971 KSQDNVIKVC ASVTFKNYIK RNWRIVEDEP NKICEADRVA IKANIVHLML bmy_02922T0/1-1020 KSQDNVIKVC ASVTFKNYIK RNWRVVEDEP NKICEADRVA IKANIVHLML BACU011345/1-971 KSQDNVIKVC ASVTFKNYIK RNWRIVEDEP NKICEADRVA IKANIVHLML 151 200 ENSTTRP00000004029/1-971 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSBTAP00000047927/1-971 SSPEQIQKQL SDAISIIGRE DFPQKWPDLL TEMVNRFQSG DFHVINGVLR bmy_02922T0/1-1020 SSPEQIQKQL SDAISIIGRE DFPQKWPDLL TEMVNRFQSG DFHVINGVLR BACU011345/1-971 SSPEQIQKQL SDAISIIGRE DFPQKWPDLL TEMVNRFQSG DFHVINGVLR 201 250 ENSTTRP00000004029/1-971 XXXXXXXXYR HEFKSNELWT EIKLVLDAFA LPLTNLFKAT IELCSTHAND ENSBTAP00000047927/1-971 TAHSLFKRYR HEFKSNELWT EIKLVLDAFA LPLTNLFKAT IELCSTHAND bmy_02922T0/1-1020 TAHSLFKRYR HEFKSNELWT EIKLVLDAFA LPLTNLFKAT IELCSTHAND BACU011345/1-971 TAHSLFKRYR HEFKSNELWT EIKLVLDAFA LPLTNLFKAT IELCSTHAND 251 300 ENSTTRP00000004029/1-971 ASALRILFSS LILISKLFYS LNFQDLPEFF EDNMETWMNN FHTLLTLDNK ENSBTAP00000047927/1-971 ASALRILFSS LILISKLFYS LNFQDLPEFF EDNMETWMNN FHTLLTLDNK bmy_02922T0/1-1020 ASALRILFSS LILISKLFYS LNFQDLPEFF EDNMETWMNN FHTLLTLDNK BACU011345/1-971 ASALRILFSS LILISKLFYS LNFQDLPEFF EDNMETWMNN FHTLLTLDNK 301 350 ENSTTRP00000004029/1-971 LLQTDDEEEA GLLELLKSQI CDNAALYAQK YDEEFQRYLP RFVTAIWNLL ENSBTAP00000047927/1-971 LLQTDDEEEA GLLELLKSQI CDNAALYAQK YDEEFQRYLP RFVTAIWNLL bmy_02922T0/1-1020 LLQTDDEEEA GLLELLKSQI CDNAALYAQK YDEEFQRYLP RFVTAIWNLL BACU011345/1-971 LLQTDDEEEA GLLELLKSQI CDNAALYAQK YDEEFQRYLP RFVTAIWNLL 351 400 ENSTTRP00000004029/1-971 VTTGQEVKYD LLVSNAIQFL ASVCERPHYK NLFEDQNTLT SICEKVIVPN ENSBTAP00000047927/1-971 VTTGQEVKYD LLVSNAIQFL ASVCERPHYK NLFEDQNTLT SICEKVIVPN bmy_02922T0/1-1020 VTTGQEVKYD LLVSNAIQFL ASVCERPHYK NLFEDQNTLT SICEKVIVPN BACU011345/1-971 VTTGQEVKYD LLVSNAIQFL ASVCERPHYK NLFEDQNTLT SICEKVIVPN 401 450 ENSTTRP00000004029/1-971 MEFRXXXXXX XXXXXXXXXX XXXXXXDIDT RRRAACDLVR GLCKFFEGPV ENSBTAP00000047927/1-971 MEFRAADEEA FEDNSEEYIR RDLEGSDIDT RRRAACDLVR GLCKFFEGPV bmy_02922T0/1-1020 MEFRAADEEA FEDNSEEYIR RDLEGSDIDT RRRAACDLVR GLCKFFEGPV BACU011345/1-971 MEFRAADEEA FEDNSEEYIR RDLEGSDIDT RRRAACDLVR GLCKFFEGPV 451 500 ENSTTRP00000004029/1-971 TGIFSGYVNS MLQEYAKNPS VNWKHKDAAI YLVTSLASKA QTQKHGITQA ENSBTAP00000047927/1-971 TGIFSGYVNS MLQEYAKNPS VNWKHKDAAI YLVTSLASKA QTQKHGITQA bmy_02922T0/1-1020 TGIFSGYVNS MLQEYAKNPS VNWKHKDAAI YLVTSLASKA QTQKHGITQA BACU011345/1-971 TGIFSGYVNS MLQEYAKNPS VNWKHKDAAI YLVTSLASKA QTQKHGITQA 501 550 ENSTTRP00000004029/1-971 NELVNLTEFF VNHILPDLKA ANVNEFPVLK ADGIKYIMIF RNQVPKEHLL ENSBTAP00000047927/1-971 NELVNLTEFF VNHILPDLKS ANVNEFPVLK ADGIKYIMIF RNQVPKEHLL bmy_02922T0/1-1020 NELVNLTEFF VNHILPDLKA ANVNEFPVLK ADGIKYVMIF RNQVPKEHLL BACU011345/1-971 NELVNLTEFF VNHILPDLKA ANVNEFPVLK ADGIKYVMIF RNQVPKEHLL 551 600 ENSTTRP00000004029/1-971 VSIPLLINHL QAESTVVHTY AAHALERMFT MRGPNNAALF TAAEIAPFVE ENSBTAP00000047927/1-971 VSIPLLINHL QAESIVVHTY AAHALERLFT MRGPNSATLF TAAEIAPFVE bmy_02922T0/1-1020 VSIPLLINHL QXESIVVHTY AAHALERLFT MRGPNNATLF TAAEIAPFVE BACU011345/1-971 VSIPLLINHL QAESIVVHTY AAHALERLFT MRGPNNATLF TAAEIAPFVE 601 650 ENSTTRP00000004029/1-971 ILLTNLFKAL TLPGSSENEY IMKAIMRSFS LLREAIIPYI PTLITQLTQK ENSBTAP00000047927/1-971 ILLTNLFKAL TLPGSSENEY IMKAIMRSFS LLQEAIIPYI PTLITQLTQK bmy_02922T0/1-1020 ILLTNLFKAL TLPGSSENEY IMKAIMRSFS LLQEAIIPYI PTLITQLTQK BACU011345/1-971 ILLTNLFKAL TLPGSSENEY IMKAIMRSFS LLQEAIIPYI PTLITQLTQK 651 700 ENSTTRP00000004029/1-971 LLAVSKNPSK PHFNHYMFEA ICLSIRITCK ANPAAVVNFE EALFLVFTEI ENSBTAP00000047927/1-971 LLAVSKNPSK PHFNHYMFEA ICLSIRITCK SNPAAVVNFE EALFLVFTEI bmy_02922T0/1-1020 LLAVSKNPSK PHFNHYMFEA ICLSIRITCK ANPAAVVNFE EALFLVFTEI BACU011345/1-971 LLAVSKNPSK PHFNHYMFEA ICLSIRITCK ANPAAVVNFE EALFLVFTEI 701 750 ENSTTRP00000004029/1-971 LQNDVQEFIP YVFQVMSLLL ETHKNDIPSS YMALFPHLLQ PVLWERTGNI ENSBTAP00000047927/1-971 LQNDVQEFIP YVFQVMSLLL ETHKNDIPSS YMALFPHLLQ PVLWERTGNI bmy_02922T0/1-1020 LQNDVQEFIP YVFQVMSLLL ETHKTDIPSS YMALFPHLLQ PVLWERTGNI BACU011345/1-971 LQNDVQEFIP YVFQVMSLLL ETHKTDIPSS YMALFPHLLQ PVLWERTGNI 751 800 ENSTTRP00000004029/1-971 PALVRLLQAF LERGSNTIAS AAADKIPGLL GVFQKLIASK ANDHQGFYLL ENSBTAP00000047927/1-971 PALVRLLQAF LERGSNTIAS AAADKIPGLL GVFQKLIASK ANDHQGFYLL bmy_02922T0/1-1020 PALVRLLQAF LERGSNTIAS AAADKIPGLL GVFQKLIASK ANDHQGFYLL BACU011345/1-971 PALVRLLQAF LERGSNTIAS AAADKIPGLL GVFQKLIASK ANDHQGFYLL 801 850 ENSTTRP00000004029/1-971 NSIIEHMPPE SVDQYRKQIF ILLFQRLQNS KTTKFIKSFL VFINLYCIKY ENSBTAP00000047927/1-971 NSIIEHMPPE SVDQYRKQIF ILLFQRLQNS KTTKFIKSFL VFINLYCIKY bmy_02922T0/1-1020 NSIIEHMPPE SVDQYRKQIF ILLFQRLQNS KTTKFIKSFL VFINLYCIKY BACU011345/1-971 NSIIEHMPPE SVDQYRKQIF ILLFQRLQNS KTTKFIKSFL VFINLYCIKY 851 900 ENSTTRP00000004029/1-971 GALALQEIFD GIQPKMFGMV LEKIIIPEIQ KVSGNVEKKI CAVGITKLLT ENSBTAP00000047927/1-971 GALALQEIFD GIQPKMFGMV LEKIIIPEIQ KVSGNVEKKI CAVGITKLLT bmy_02922T0/1-1020 GALALQEIFD GIQPKMFGMV LEKIIIPEIQ KVSGNVEKKI CAVGITKLLT BACU011345/1-971 GALALQEIFD GIQPKMFGMV LEKIIIPEMQ KVSGNVEKKI CAVGITKLLT 901 950 ENSTTRP00000004029/1-971 ECPPMMDTEY TKLWTPLLQS LIGLFELPED NTIPDEEHFI DIEDTPGYQT ENSBTAP00000047927/1-971 ECPPMMDTEY TKLWTPLLQS LIGLFELPED DTIPDEEHFI DIEDTPGYQT bmy_02922T0/1-1020 ECPPMMDTEY TKLWTPLLQS LIGLFELPED TTIPDEEHFI DIEDTPGYQT BACU011345/1-971 ECPPMMDTEY TKLWTPLLQS LIGLFELPED TTIPDEEHFV DIEDTPGYQT 951 1000 ENSTTRP00000004029/1-971 AFSQLAFAGK KEHDPVGQMV NNPRIHLAQS LHKLSTACPG RVPSMVSTSL ENSBTAP00000047927/1-971 AFSQLAFAGK KEHDPVGQMV NNPKIHLAQS LHKLSTACPG RVPSMVSTSL bmy_02922T0/1-1020 AFSQLAFAGK KEHDPVGQMV NNPRIHLAQS LHKLSTACPG RVPSMVSTSL BACU011345/1-971 AFSQLAFAGK KEHDPVGQMV NNPRIHLAQS LHKLSTACPG RVPSMVSTSL 1001 1050 ENSTTRP00000004029/1-971 NAEALQYLQG YLQAASVTLL ENSBTAP00000047927/1-971 NAEALQYLQG YLQAASVTLL bmy_02922T0/1-1020 NAEALQYLQG YLQAASVTLL BACU011345/1-971 NAEALQYLQG YLQAASVTLL