KEY:
ENSP* - Homo sapiens (Human)
ENSBTA* - Bos taurus (Cow)
ENSTTR* - Tursiops truncatus (Dolphin)
bmy_* - Balaena mysticetus (Bowhead whale)
BACU* - Balaenoptera acutorostrata (Minke whale)
Copy from below the line for a valid .msf file.
----------------------------------------------------------------------------------
NoName MSF: 4 Type: P Thu May 15 17:58:30 2014 Check: 00 ..
Name: ENSTTRP00000004029/1-971 Len: 1020 Check: 1810 Weight: 1.00
Name: ENSBTAP00000047927/1-971 Len: 1020 Check: 5106 Weight: 1.00
Name: bmy_02922T0/1-1020 Len: 1020 Check: 5991 Weight: 1.00
Name: BACU011345/1-971 Len: 1020 Check: 6473 Weight: 1.00
//
1 50
ENSTTRP00000004029/1-971 ---------- ---------- ---------- ---------- ---------M
ENSBTAP00000047927/1-971 ---------- ---------- ---------- ---------- ---------M
bmy_02922T0/1-1020 MRPDHSLAAA PFCRGLNVRW SGSRGGYCRL RSAAEIPFSV PVSPRGSVAM
BACU011345/1-971 ---------- ---------- ---------- ---------- ---------M
51 100
ENSTTRP00000004029/1-971 ELSDANLQTL TEYLKKTLDP DPAIRRPAEK FLESVEGNQN YPLLLLTLLE
ENSBTAP00000047927/1-971 ELSDANLQTL TEYLKKTLDP DPAIRRPAEK FLESVEGNQN YPLLLLTLLE
bmy_02922T0/1-1020 ELSDANLQTL TEYLKKTLDP DPAIRRPAEK FLESVEGNQN YPLLLLTLLE
BACU011345/1-971 ELSDANLQTL TEYLKKTLDP DPAIRRPAEK FLESVEGNQN YPLLLLTLLE
101 150
ENSTTRP00000004029/1-971 KAQDNVIKVC ASVTFKNYIK RNWRIXXXXX XXXXXXXXXX XXXXXXXXXX
ENSBTAP00000047927/1-971 KSQDNVIKVC ASVTFKNYIK RNWRIVEDEP NKICEADRVA IKANIVHLML
bmy_02922T0/1-1020 KSQDNVIKVC ASVTFKNYIK RNWRVVEDEP NKICEADRVA IKANIVHLML
BACU011345/1-971 KSQDNVIKVC ASVTFKNYIK RNWRIVEDEP NKICEADRVA IKANIVHLML
151 200
ENSTTRP00000004029/1-971 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
ENSBTAP00000047927/1-971 SSPEQIQKQL SDAISIIGRE DFPQKWPDLL TEMVNRFQSG DFHVINGVLR
bmy_02922T0/1-1020 SSPEQIQKQL SDAISIIGRE DFPQKWPDLL TEMVNRFQSG DFHVINGVLR
BACU011345/1-971 SSPEQIQKQL SDAISIIGRE DFPQKWPDLL TEMVNRFQSG DFHVINGVLR
201 250
ENSTTRP00000004029/1-971 XXXXXXXXYR HEFKSNELWT EIKLVLDAFA LPLTNLFKAT IELCSTHAND
ENSBTAP00000047927/1-971 TAHSLFKRYR HEFKSNELWT EIKLVLDAFA LPLTNLFKAT IELCSTHAND
bmy_02922T0/1-1020 TAHSLFKRYR HEFKSNELWT EIKLVLDAFA LPLTNLFKAT IELCSTHAND
BACU011345/1-971 TAHSLFKRYR HEFKSNELWT EIKLVLDAFA LPLTNLFKAT IELCSTHAND
251 300
ENSTTRP00000004029/1-971 ASALRILFSS LILISKLFYS LNFQDLPEFF EDNMETWMNN FHTLLTLDNK
ENSBTAP00000047927/1-971 ASALRILFSS LILISKLFYS LNFQDLPEFF EDNMETWMNN FHTLLTLDNK
bmy_02922T0/1-1020 ASALRILFSS LILISKLFYS LNFQDLPEFF EDNMETWMNN FHTLLTLDNK
BACU011345/1-971 ASALRILFSS LILISKLFYS LNFQDLPEFF EDNMETWMNN FHTLLTLDNK
301 350
ENSTTRP00000004029/1-971 LLQTDDEEEA GLLELLKSQI CDNAALYAQK YDEEFQRYLP RFVTAIWNLL
ENSBTAP00000047927/1-971 LLQTDDEEEA GLLELLKSQI CDNAALYAQK YDEEFQRYLP RFVTAIWNLL
bmy_02922T0/1-1020 LLQTDDEEEA GLLELLKSQI CDNAALYAQK YDEEFQRYLP RFVTAIWNLL
BACU011345/1-971 LLQTDDEEEA GLLELLKSQI CDNAALYAQK YDEEFQRYLP RFVTAIWNLL
351 400
ENSTTRP00000004029/1-971 VTTGQEVKYD LLVSNAIQFL ASVCERPHYK NLFEDQNTLT SICEKVIVPN
ENSBTAP00000047927/1-971 VTTGQEVKYD LLVSNAIQFL ASVCERPHYK NLFEDQNTLT SICEKVIVPN
bmy_02922T0/1-1020 VTTGQEVKYD LLVSNAIQFL ASVCERPHYK NLFEDQNTLT SICEKVIVPN
BACU011345/1-971 VTTGQEVKYD LLVSNAIQFL ASVCERPHYK NLFEDQNTLT SICEKVIVPN
401 450
ENSTTRP00000004029/1-971 MEFRXXXXXX XXXXXXXXXX XXXXXXDIDT RRRAACDLVR GLCKFFEGPV
ENSBTAP00000047927/1-971 MEFRAADEEA FEDNSEEYIR RDLEGSDIDT RRRAACDLVR GLCKFFEGPV
bmy_02922T0/1-1020 MEFRAADEEA FEDNSEEYIR RDLEGSDIDT RRRAACDLVR GLCKFFEGPV
BACU011345/1-971 MEFRAADEEA FEDNSEEYIR RDLEGSDIDT RRRAACDLVR GLCKFFEGPV
451 500
ENSTTRP00000004029/1-971 TGIFSGYVNS MLQEYAKNPS VNWKHKDAAI YLVTSLASKA QTQKHGITQA
ENSBTAP00000047927/1-971 TGIFSGYVNS MLQEYAKNPS VNWKHKDAAI YLVTSLASKA QTQKHGITQA
bmy_02922T0/1-1020 TGIFSGYVNS MLQEYAKNPS VNWKHKDAAI YLVTSLASKA QTQKHGITQA
BACU011345/1-971 TGIFSGYVNS MLQEYAKNPS VNWKHKDAAI YLVTSLASKA QTQKHGITQA
501 550
ENSTTRP00000004029/1-971 NELVNLTEFF VNHILPDLKA ANVNEFPVLK ADGIKYIMIF RNQVPKEHLL
ENSBTAP00000047927/1-971 NELVNLTEFF VNHILPDLKS ANVNEFPVLK ADGIKYIMIF RNQVPKEHLL
bmy_02922T0/1-1020 NELVNLTEFF VNHILPDLKA ANVNEFPVLK ADGIKYVMIF RNQVPKEHLL
BACU011345/1-971 NELVNLTEFF VNHILPDLKA ANVNEFPVLK ADGIKYVMIF RNQVPKEHLL
551 600
ENSTTRP00000004029/1-971 VSIPLLINHL QAESTVVHTY AAHALERMFT MRGPNNAALF TAAEIAPFVE
ENSBTAP00000047927/1-971 VSIPLLINHL QAESIVVHTY AAHALERLFT MRGPNSATLF TAAEIAPFVE
bmy_02922T0/1-1020 VSIPLLINHL QXESIVVHTY AAHALERLFT MRGPNNATLF TAAEIAPFVE
BACU011345/1-971 VSIPLLINHL QAESIVVHTY AAHALERLFT MRGPNNATLF TAAEIAPFVE
601 650
ENSTTRP00000004029/1-971 ILLTNLFKAL TLPGSSENEY IMKAIMRSFS LLREAIIPYI PTLITQLTQK
ENSBTAP00000047927/1-971 ILLTNLFKAL TLPGSSENEY IMKAIMRSFS LLQEAIIPYI PTLITQLTQK
bmy_02922T0/1-1020 ILLTNLFKAL TLPGSSENEY IMKAIMRSFS LLQEAIIPYI PTLITQLTQK
BACU011345/1-971 ILLTNLFKAL TLPGSSENEY IMKAIMRSFS LLQEAIIPYI PTLITQLTQK
651 700
ENSTTRP00000004029/1-971 LLAVSKNPSK PHFNHYMFEA ICLSIRITCK ANPAAVVNFE EALFLVFTEI
ENSBTAP00000047927/1-971 LLAVSKNPSK PHFNHYMFEA ICLSIRITCK SNPAAVVNFE EALFLVFTEI
bmy_02922T0/1-1020 LLAVSKNPSK PHFNHYMFEA ICLSIRITCK ANPAAVVNFE EALFLVFTEI
BACU011345/1-971 LLAVSKNPSK PHFNHYMFEA ICLSIRITCK ANPAAVVNFE EALFLVFTEI
701 750
ENSTTRP00000004029/1-971 LQNDVQEFIP YVFQVMSLLL ETHKNDIPSS YMALFPHLLQ PVLWERTGNI
ENSBTAP00000047927/1-971 LQNDVQEFIP YVFQVMSLLL ETHKNDIPSS YMALFPHLLQ PVLWERTGNI
bmy_02922T0/1-1020 LQNDVQEFIP YVFQVMSLLL ETHKTDIPSS YMALFPHLLQ PVLWERTGNI
BACU011345/1-971 LQNDVQEFIP YVFQVMSLLL ETHKTDIPSS YMALFPHLLQ PVLWERTGNI
751 800
ENSTTRP00000004029/1-971 PALVRLLQAF LERGSNTIAS AAADKIPGLL GVFQKLIASK ANDHQGFYLL
ENSBTAP00000047927/1-971 PALVRLLQAF LERGSNTIAS AAADKIPGLL GVFQKLIASK ANDHQGFYLL
bmy_02922T0/1-1020 PALVRLLQAF LERGSNTIAS AAADKIPGLL GVFQKLIASK ANDHQGFYLL
BACU011345/1-971 PALVRLLQAF LERGSNTIAS AAADKIPGLL GVFQKLIASK ANDHQGFYLL
801 850
ENSTTRP00000004029/1-971 NSIIEHMPPE SVDQYRKQIF ILLFQRLQNS KTTKFIKSFL VFINLYCIKY
ENSBTAP00000047927/1-971 NSIIEHMPPE SVDQYRKQIF ILLFQRLQNS KTTKFIKSFL VFINLYCIKY
bmy_02922T0/1-1020 NSIIEHMPPE SVDQYRKQIF ILLFQRLQNS KTTKFIKSFL VFINLYCIKY
BACU011345/1-971 NSIIEHMPPE SVDQYRKQIF ILLFQRLQNS KTTKFIKSFL VFINLYCIKY
851 900
ENSTTRP00000004029/1-971 GALALQEIFD GIQPKMFGMV LEKIIIPEIQ KVSGNVEKKI CAVGITKLLT
ENSBTAP00000047927/1-971 GALALQEIFD GIQPKMFGMV LEKIIIPEIQ KVSGNVEKKI CAVGITKLLT
bmy_02922T0/1-1020 GALALQEIFD GIQPKMFGMV LEKIIIPEIQ KVSGNVEKKI CAVGITKLLT
BACU011345/1-971 GALALQEIFD GIQPKMFGMV LEKIIIPEMQ KVSGNVEKKI CAVGITKLLT
901 950
ENSTTRP00000004029/1-971 ECPPMMDTEY TKLWTPLLQS LIGLFELPED NTIPDEEHFI DIEDTPGYQT
ENSBTAP00000047927/1-971 ECPPMMDTEY TKLWTPLLQS LIGLFELPED DTIPDEEHFI DIEDTPGYQT
bmy_02922T0/1-1020 ECPPMMDTEY TKLWTPLLQS LIGLFELPED TTIPDEEHFI DIEDTPGYQT
BACU011345/1-971 ECPPMMDTEY TKLWTPLLQS LIGLFELPED TTIPDEEHFV DIEDTPGYQT
951 1000
ENSTTRP00000004029/1-971 AFSQLAFAGK KEHDPVGQMV NNPRIHLAQS LHKLSTACPG RVPSMVSTSL
ENSBTAP00000047927/1-971 AFSQLAFAGK KEHDPVGQMV NNPKIHLAQS LHKLSTACPG RVPSMVSTSL
bmy_02922T0/1-1020 AFSQLAFAGK KEHDPVGQMV NNPRIHLAQS LHKLSTACPG RVPSMVSTSL
BACU011345/1-971 AFSQLAFAGK KEHDPVGQMV NNPRIHLAQS LHKLSTACPG RVPSMVSTSL
1001 1050
ENSTTRP00000004029/1-971 NAEALQYLQG YLQAASVTLL
ENSBTAP00000047927/1-971 NAEALQYLQG YLQAASVTLL
bmy_02922T0/1-1020 NAEALQYLQG YLQAASVTLL
BACU011345/1-971 NAEALQYLQG YLQAASVTLL