KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:58:32 2014 Check: 00 .. Name: bmy_11920T0/1-472 Len: 530 Check: 6761 Weight: 1.00 Name: ENSTTRP00000015209/1-527 Len: 530 Check: 7739 Weight: 1.00 Name: ENSP00000358814/1-530 Len: 530 Check: 3107 Weight: 1.00 Name: ENSBTAP00000047947/1-530 Len: 530 Check: 3107 Weight: 1.00 Name: BACU002731/1-477 Len: 530 Check: 1791 Weight: 1.00 // 1 50 bmy_11920T0/1-472 --MPDAMPLP GVGEELKQAK EIEDAEKYSF MATVTKAPKK QIQFADDMQE ENSTTRP00000015209/1-527 MSMPDAMPLP GVGEELKQAK EIEDAEKYSF MATVTKAPKK QIQFADDMQE ENSP00000358814/1-530 MSMPDAMPLP GVGEELKQAK EIEDAEKYSF MATVTKAPKK QIQFADDMQE ENSBTAP00000047947/1-530 MSMPDAMPLP GVGEELKQAK EIEDAEKYSF MATVTKAPKK QIQFADDMQE BACU002731/1-477 ---------- ---------- ---------- ---------- -------MQE 51 100 bmy_11920T0/1-472 FTKFPTKTGR RSLSRSISQS STDSYSSAAS YTDSSDDEVS PREKQQTNSK ENSTTRP00000015209/1-527 FTKFPTKTGR RSLSRSISQS STDSYSSAA- YKDSSDDEVS PREKQQTNSK ENSP00000358814/1-530 FTKFPTKTGR RSLSRSISQS STDSYSSAAS YTDSSDDEVS PREKQQTNSK ENSBTAP00000047947/1-530 FTKFPTKTGR RSLSRSISQS STDSYSSAAS YTDSSDDEVS PREKQQTNSK BACU002731/1-477 FTKFPTKTGR RSLSRSISQS STDSYSSAAS YTDSSDDEVS PREKQQTNSK 101 150 bmy_11920T0/1-472 GSSNFCVKNI KQAEFGRREI EIAEQDMSAL ISLRKRAQGE KPLAGAKIVG ENSTTRP00000015209/1-527 GSSNFCVKNI KQAEFGRREI EIAEQDMSAL ISLRKRAQGE KPLAGAKIVG ENSP00000358814/1-530 GSSNFCVKNI KQAEFGRREI EIAEQDMSAL ISLRKRAQGE KPLAGAKIVG ENSBTAP00000047947/1-530 GSSNFCVKNI KQAEFGRREI EIAEQDMSAL ISLRKRAQGE KPLAGAKIVG BACU002731/1-477 GSSNFCVKNI KQAEFGRREI EIAEQDMSAL ISLRKRAQGE KPLAGAKIVG 151 200 bmy_11920T0/1-472 CTHITAQTAV LIETLCALGA QCRWSACNIY STQNEVAAAL AEAGVAVFAW ENSTTRP00000015209/1-527 CTHITAQTAV LIETLCALGA QCRWSACNIY STQNEVAAAL AEAGVAVFAW ENSP00000358814/1-530 CTHITAQTAV LIETLCALGA QCRWSACNIY STQNEVAAAL AEAGVAVFAW ENSBTAP00000047947/1-530 CTHITAQTAV LIETLCALGA QCRWSACNIY STQNEVAAAL AEAGVAVFAW BACU002731/1-477 CTHITAQTAV LIETLCALGA QCRWSACNIY STQNEVAAAL AEAGVAVFAW 201 250 bmy_11920T0/1-472 KGESEDDFWW CIDRCVNMDG WQANMILDDG GDLTHWVYKK YPNVFKKIRG ENSTTRP00000015209/1-527 KGESEDDFWW CIDRCVNMDG WQANMILDDG GDLTHWVYKK YPNVFKKIRG ENSP00000358814/1-530 KGESEDDFWW CIDRCVNMDG WQANMILDDG GDLTHWVYKK YPNVFKKIRG ENSBTAP00000047947/1-530 KGESEDDFWW CIDRCVNMDG WQANMILDDG GDLTHWVYKK YPNVFKKIRG BACU002731/1-477 KGESEDDFWW CIDRCVNMDG WQANMILDDG GDLTHWVYKK YPNVFKKIRG 251 300 bmy_11920T0/1-472 IVEESVTGVH RLYQLSKAGK LCVPAMNVND SVTKQKFDNL YCCRESILDG ENSTTRP00000015209/1-527 IVEESVTGVH RLYQLSKAGK LCVPAMNVND SVTKQKFDNL YCCRESILD- ENSP00000358814/1-530 IVEESVTGVH RLYQLSKAGK LCVPAMNVND SVTKQKFDNL YCCRESILDG ENSBTAP00000047947/1-530 IVEESVTGVH RLYQLSKAGK LCVPAMNVND SVTKQKFDNL YCCRESILDG BACU002731/1-477 IVEESVTGVH RLYQLSKAGK LCVPAMNVND SVTKQKFDNL YCCRESILDG 301 350 bmy_11920T0/1-472 LKRTTDVMFG GKQVVVCGYG EVGKGCCAAL KALGAIVYIT EIDPICALQA ENSTTRP00000015209/1-527 -LKTTDVMFG GKQVVVCGYG EVGKGCCAAL KALGAIVYIT EIDPICALQA ENSP00000358814/1-530 LKRTTDVMFG GKQVVVCGYG EVGKGCCAAL KALGAIVYIT EIDPICALQA ENSBTAP00000047947/1-530 LKRTTDVMFG GKQVVVCGYG EVGKGCCAAL KALGAIVYIT EIDPICALQA BACU002731/1-477 LKRTTDVMFG GKQVVVCGYG EVGKGCCAAL KALGAIVYIT EIDPICALQA 351 400 bmy_11920T0/1-472 CMDGFRVVKL NEVIRQVDVV ITCTGNKNVV TREHLDRMKN SCIVCNMGHS ENSTTRP00000015209/1-527 CMDGFRVVKL NEVIRQVDVV ITCTGNKNVV TREHLDRMKN SCIVCNMGHS ENSP00000358814/1-530 CMDGFRVVKL NEVIRQVDVV ITCTGNKNVV TREHLDRMKN SCIVCNMGHS ENSBTAP00000047947/1-530 CMDGFRVVKL NEVIRQVDVV ITCTGNKNVV TREHLDRMKN SCIVCNMGHS BACU002731/1-477 CMDGFRVVKL NEVIRQVDVV ITCTGNKNVV TREHLDRMKN SCIVCNMGHS 401 450 bmy_11920T0/1-472 NTEIDVTSLR TPELTWERVR SQVDHVIWPD GKRVVLLAEG RLLNLSCSTV ENSTTRP00000015209/1-527 NTEIDVTSLR TPELTWERVR SHVDHVIWPD GKRVVLLAEG RLLNLSCSTV ENSP00000358814/1-530 NTEIDVTSLR TPELTWERVR SQVDHVIWPD GKRVVLLAEG RLLNLSCSTV ENSBTAP00000047947/1-530 NTEIDVTSLR TPELTWERVR SQVDHVIWPD GKRVVLLAEG RLLNLSCSTV BACU002731/1-477 NTEIDVTSLR TPELTWERVR SQVDHVIWPD GKR------G RLLNLSCSTV 451 500 bmy_11920T0/1-472 PTFVLSITAT TQIL------ ---------- ---------- ---------- ENSTTRP00000015209/1-527 PTFVLSITAT TQALALIELY NAPEGRYKQD VYLLPKKMDE YVASLHLPSF ENSP00000358814/1-530 PTFVLSITAT TQALALIELY NAPEGRYKQD VYLLPKKMDE YVASLHLPSF ENSBTAP00000047947/1-530 PTFVLSITAT TQALALIELY NAPEGRYKQD VYLLPKKMDE YVASLHLPSF BACU002731/1-477 PTFVLSITAT TQALALIELY NAPEGRYKQD VYLLPKKMDE YVASLHLPSF 501 550 bmy_11920T0/1-472 ---MDRITKD QST------- ---------- ENSTTRP00000015209/1-527 DAHLTELTDD QAKYLGLNKN GPFKPNYYRY ENSP00000358814/1-530 DAHLTELTDD QAKYLGLNKN GPFKPNYYRY ENSBTAP00000047947/1-530 DAHLTELTDD QAKYLGLNKN GPFKPNYYRY BACU002731/1-477 DAHLTELTDD QAKYLGLNKN GPFKPNYYSH