KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:58:33 2014 Check: 00 .. Name: ENSBTAP00000047958/1-724 Len: 804 Check: 1097 Weight: 1.00 Name: ENSP00000338093/1-802 Len: 804 Check: 816 Weight: 1.00 Name: bmy_15462T0/1-751 Len: 804 Check: 3213 Weight: 1.00 Name: BACU001800/1-581 Len: 804 Check: 9362 Weight: 1.00 Name: ENSTTRP00000015371/1-700 Len: 804 Check: 1332 Weight: 1.00 // 1 50 ENSBTAP00000047958/1-724 MAAEALAAEA VASRLARQEE DIRWLWAEVH RLRDEQLNAP DRCQAEGPCL ENSP00000338093/1-802 MAAEALAAEA VASRLERQEE DIRWLWSEVE RLRDEQLNAP YSCQAEGPCL bmy_15462T0/1-751 MAAEALAADA VASRLARQEE DIRWLWTEVH RLRDEQLNAP DRCQAEGPCL BACU001800/1-581 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000015371/1-700 ---------- ---------- ---------- ---------- ---------- 51 100 ENSBTAP00000047958/1-724 TREVAQLRAE NRELRHCLYR LRLCLAEELS HQARLESAAR AEAGRAAAGA ENSP00000338093/1-802 TREVAQLRAE NCDLRHRLCS LRLCLAEERS RQATLESAEL EAA--QEAGA bmy_15462T0/1-751 TREVAQLRAE NRELRHRLYR LRLCLAEELS HQARRESALR QEAGRAAAGA BACU001800/1-581 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000015371/1-700 ---------- ---------- ---------- ---------- ---------- 101 150 ENSBTAP00000047958/1-724 QPPPSQSLEE DVK----KEI DPDNEVKNPP NFMKERLKFF EILKKDHQLL ENSP00000338093/1-802 QPPPSQSQDK DMKKKKMKES EADSEVKHQP IFIKERLKLF EILKKDHQLL bmy_15462T0/1-751 QPPPSQSQEK DIKKK--KES GPDSEVKNPL NFVKERLKLF EILKKDHQLL BACU001800/1-581 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000015371/1-700 -PPPSQSQGK DIKKK--KES GPDSEVKNPP NFVKERLKLF EILKKDHQLL 151 200 ENSBTAP00000047958/1-724 LAIYEKKGDS SNVITVRVAD GRTVKGEAWK TTPYQVAAEI SQELAETTVV ENSP00000338093/1-802 LAIYGKKGDT SNIITVRVAD GQTVQGEVWK TTPYQVAAEI SQELAESTVI bmy_15462T0/1-751 LAIYEKKGST SNVITVRVAD GKTVEGEAWK TTPYQVAAEI SQELAESTVI BACU001800/1-581 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000015371/1-700 LAIYGKKGNT SNVITVRVAD GKTVEGEAWK TTPYQVAAEI SQELAESTVI 201 250 ENSBTAP00000047958/1-724 AKVNGELWDL DRPLEGDATV ELLTFEDEEA RAVYWHSSAH VLGEALELHY ENSP00000338093/1-802 AKVNGELWDL DRPLEGDSSL ELLTFDNEEA QAVYWHSSAH ILGEAMELYY bmy_15462T0/1-751 AKVNGELWDL DRPLEGDSTL ELLMFEDKEA QAVYWHSSAH VLGEALELRY BACU001800/1-581 ---------- ---------- ---MFEDKEA QAVYWHSSAH VLGEALELRY ENSTTRP00000015371/1-700 AKVNGELWDL DRPLE-DTTL ELLTFEDKEA QTVYWHSSAH VLGEALELHY 251 300 ENSBTAP00000047958/1-724 GGLLCCSPPG DGSFHYDVYL EDRAVSSAEL PVLESMCQAI IKEQQPFERL ENSP00000338093/1-802 GGHLCYGPPI ENGFYYDMFI EDRAVSSTEL SALENICKAI IKEKQPFERL bmy_15462T0/1-751 GGLLCCGPPT DCGFYYDMFL EDRAVSSTEL PALESACKAI IKEQQPFERL BACU001800/1-581 GGLLCCGPPT DCGFYYDMFL EDRAVSSTEL PALESACKAI IKEQQPFERL ENSTTRP00000015371/1-700 GGLLCCGPPT DCGFYYDMFL KDRAVSSTEL PALESTCKAI IKEQQPFERL 301 350 ENSBTAP00000047958/1-724 EVSTKVLLDL FKYNKFKCRI LKEKVATPTT TVYRCGPLVE LCKGPHVRHT ENSP00000338093/1-802 EVSKEILLEM FKYNKFKCRI LNEKVNTATT TVYRCGPLID LCKGPHVRHT bmy_15462T0/1-751 EVSKEALLDL FKYNKFKCRI LKERINMPTT TVYRCGPLVD LCKGPHVRHT BACU001800/1-581 EVSKEALLDL FKYNKFKCRI LKEKINTPTT TVYRCGPLVD LCKGPHVRHT ENSTTRP00000015371/1-700 EVSKEALLDL FKYNKFKCRI LKENINTPTT TVYRCGPLVD LCKGPHVRHT 351 400 ENSBTAP00000047958/1-724 GTIKVIKIFK NSLAYWADNP EMEMLQRVYG VSFPDEQRMA AWEELQEEAR ENSP00000338093/1-802 GKIKTIKIFK NSSTYWEGNP EMETLQRIYG ISFPDNKMMR DWEKFQEEAK bmy_15462T0/1-751 GKIKAIKIFK NSSTYWEGNP EMETLQRVYG ISFPDDQMMT AWEKLQEETK BACU001800/1-581 GKIKAIKIFK NSSTYWEGNP EMETLQRVYG ISFPDDQMMT AWEKLQEEAK ENSTTRP00000015371/1-700 GKIKEIKIFK NSSAYWEGNP EMETLQRVYG ISFPDDQMMT AWEKLQEETK 401 450 ENSBTAP00000047958/1-724 ARDHRTIGKE QELFFFHDLS PGSCFFLPRG ACIYNTLIDF IREQHHQRNF ENSP00000338093/1-802 NRDHRKIGKE QELFFFHDLS PGSCFFLPRG AFIYNTLTDF IREEYHKRDF bmy_15462T0/1-751 TQDHRRIGKE QELFFFHDLS PGSCFFLPRG AFIYNTLMDF IREEYHRRSF BACU001800/1-581 TQDHRRIGKE QELFFFHDLS PGSCFFLPRG AFVYNTLMDF IREEYHRRSF ENSTTRP00000015371/1-700 TQDHRRIGKE QELFFFHDLS PGSCFFLPRG AFVYNTLMDF IREEYHQRSF 451 500 ENSBTAP00000047958/1-724 TEVLSPNMYS CKLWEASGHW QHYSENMFTF DIDKDTFALK PMNCPGHCLM ENSP00000338093/1-802 TEVLSPNMYN SKLWEASGHW QHYSENMFTF EIEKDTFALK PMNCPGHCLM bmy_15462T0/1-751 MEVLSPNVYS SKLWETSGHW QHYSDNMFTF DIDKDTFALK PMNCPGHCLM BACU001800/1-581 MEVLSPNVYS SKLWETSGHW QHYSDNMFTF DIDKDTFALK PMNCPGHCLM ENSTTRP00000015371/1-700 MEVLSPNVYS SKLWETSGHW QHYSDNMFTF DIDKDTFALK PMNCPGHCLM 501 550 ENSBTAP00000047958/1-724 FAHRPRSWRE MPIRLADFGV LHRNEPSGAL SGLTCVRRFQ QDDAHIFCTV ENSP00000338093/1-802 FAHRPRSWRE MPIRFADFGV LHRNELSGTL SGLTRVRRFQ QDDAHIFCTV bmy_15462T0/1-751 FAHRPRSWRE MPIRFADFGA LHRNEPLGTL SGLTR----- ---------- BACU001800/1-581 FAHRPRSWRE MPIRFADFGA LHRNEPLGTL SGLTCVRRFQ QDDAHIFCTV ENSTTRP00000015371/1-700 FAHRPRSWRE MPIRFADFGA LHRNEPSGTL HGLTHVRRFQ QDDAHIFCTV 551 600 ENSBTAP00000047958/1-724 GQLEEEIKGC LQFLQSVYST FGFSFQLNLS TRPENFLGKI ELWDEAEKQL ENSP00000338093/1-802 EQIEEEIKGC LQFLQSVYST FGFSFQLNLS TRPENFLGEI EMWNEAEKQL bmy_15462T0/1-751 --IEEEIKGC LQFLQSVYST FGFSFQLNLS TRPENFLGEV EIWDEAEKQL BACU001800/1-581 EQIEEEIKGC LQFLQSVYST FGFSFQLNLS TRPENFLGEV EIWDEAEKQL ENSTTRP00000015371/1-700 EQIEEEIKGC LQFLQSVYST FGFSFQLNLS TRPENFLGEV EIWDEAEKQL 601 650 ENSBTAP00000047958/1-724 QNSLMEFGKP WKINPGEGAF YGPKIDLEIK DALGRYHQCA TIQLDFQLPI ENSP00000338093/1-802 QNSLMDFGEP WKMNPGDGAF YGPKIDIKIK DAIGRYHQCA TIQLDFQLPI bmy_15462T0/1-751 QNSLMEFGKP WKMNPGDGAF YGPKIDIKIK DAIGRYHQCA TIQLDFQLPV BACU001800/1-581 QYSLMEFGKP WKMNPGDGAF YGPKIDIKIK DAIGRYHQCA TIQLDFQLPV ENSTTRP00000015371/1-700 QNSLMEFGKP WKMNPGDGAF YGPKIDIKIK DAIGRYHQCA TIQLDFQLPV 651 700 ENSBTAP00000047958/1-724 RFNLTYVSKD GDDKKNPVII HQAILGSVER MIAILSENYG GKWPFWLSPR ENSP00000338093/1-802 RFNLTYVSKD GDDKKRPVII HRAILGSVER MIAILSENYG GKWPFWLSPR bmy_15462T0/1-751 RFNLTYVSKD GDDKKNPVII HRAILGG--- -----KNDSH SLRKLW--RK BACU001800/1-581 RFNLTYVSKD GDDKKSPVII HRAILGSVER MIAILSENYG GRWPFWLSPR ENSTTRP00000015371/1-700 RFNLTYVSKD GDDKKNPVII HRAILGSVER MIAILSENYG GKWPFWLSPR 701 750 ENSBTAP00000047958/1-724 QVMVIPVGPT CEKYALQ--- ---------- -------WLE KRKRQIML-- ENSP00000338093/1-802 QVMVIPVGPT CEKYALQVSS EFFEEGFMAD VDLDHSCTLN KKIRNAQLAQ bmy_15462T0/1-751 MVMVIPVEPT CEKYALQ--- ---------- ---------- -KIRNAQLDQ BACU001800/1-581 QVMVIPVEPT CEKYALQVST EFFEEGFMAD VDLDHSCTLN KKIRNAQLDQ ENSTTRP00000015371/1-700 QVMVIPVEPT CEKYALQVST EFFEEGFMAD VDLDHSCTLN KKIQNAQLDQ 751 800 ENSBTAP00000047958/1-724 ---------- ---------- ---------- ---------- ---------- ENSP00000338093/1-802 YNFILVVGEK EKIDNAVNVR TRDNKIHGEI LVTSAIDKLK NLRKTRTLNA bmy_15462T0/1-751 YNFILVVGEK EKTNNAVNVR TRDNKIHGEI SVTSAIDKLK NLKKSRTLNA BACU001800/1-581 YNFILVVGEK EKTNNAVNVR TRDNKIHGEI SVTSAIDKLK NLKKSRTLNA ENSTTRP00000015371/1-700 YNFILVVGEK EKTNNAVNVR TRDNKIHGEI SVTSAIDKLK NLKKSRTLNA 801 850 ENSBTAP00000047958/1-724 ---- ENSP00000338093/1-802 EEAF bmy_15462T0/1-751 EEEF BACU001800/1-581 EEEF ENSTTRP00000015371/1-700 EEEF