KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:58:33 2014 Check: 00 .. Name: ENSP00000269127/1-236 Len: 289 Check: 7616 Weight: 1.00 Name: ENSBTAP00000047980/1-234 Len: 289 Check: 4539 Weight: 1.00 Name: ENSTTRP00000008388/1-261 Len: 289 Check: 9355 Weight: 1.00 Name: bmy_10823T0/1-262 Len: 289 Check: 1077 Weight: 1.00 // 1 50 ENSP00000269127/1-236 ---------- ---------- -------MEA SDGQGGEGDK PLEQVTNVSC ENSBTAP00000047980/1-234 ---------- ---------- -------MEA SDGQADEREE PLEQGTNARS ENSTTRP00000008388/1-261 HSGSRSSRSE ARGGRSATLE PIGTPVEMEA LDGHGGEGHQ PLEKGTDGPR bmy_10823T0/1-262 ---------- ---------- -------MEA SDGQGGEGDQ PLEKGTDAPC 51 100 ENSP00000269127/1-236 LETSSSASPA RDSLMRHAKG LDQDTFKTCK EYLRPLKKFL RKLHLPRDLP ENSBTAP00000047980/1-234 LERRSSTTPA KDSLVRHAKG LDRDTFKICK EYLRPLKKFL RKLHLPKDLP ENSTTRP00000008388/1-261 LE---STIPA RDSLVCQAKG LDKDTFKICK ECLRPLKKFL RRLHPPRDLP bmy_10823T0/1-262 LEGSSSTIPA RDSLVCQAKG LGQDTFKICK EYLRPLKKFL RKLHLPRDLP 101 150 ENSP00000269127/1-236 QKKKLKYMKQ SLVVLGDHIN TFLQHYCQAW EIKHWRKMLW RFISLFSELE ENSBTAP00000047980/1-234 QKKKLKYMKQ SLVVLGDHIN TFLQHYCRAW EIKHWKKMLW RFVSLFSELE ENSTTRP00000008388/1-261 QEKKLKYMKQ SLVVLGDHIN TFLQHYCRAW EIKHWRKKLW RFVSLFSELE bmy_10823T0/1-262 QKKKLKYMKQ SLVVLGDHIN TFLQHYCRAW EIKHWRKMLW RFVSLFSELE 151 200 ENSP00000269127/1-236 AKQLRRLYKY TKSSQPAKFL VTFCASDAPE RSLLADREDS LPKLCHAWGL ENSBTAP00000047980/1-234 AKQLRKLYKY TKNNQTTKFL MAFCPLDAPE SSLLADQEDS LPKLCTAWGL ENSTTRP00000008388/1-261 AKQLYRLYKY TKNSQTAKFP XXXXXXXXXX XXXPANKEDS LPKLCTAWGL bmy_10823T0/1-262 AKQLHRLYKY TKKNQTDKFP VAFYPLDIPE SSLLANKEDS LPKLCTAWGL 201 250 ENSP00000269127/1-236 HSNISGMKER LSNMQTPGQG SPLPGQPRSQ DHVKKDSLRE LSQKPKLKRK ENSBTAP00000047980/1-234 RSHLNGMKER LSKLQAPGHP ARLLKELRAR GPRRRGS--K LPQEPKLKRR ENSTTRP00000008388/1-261 HSHLSAMKER LSKMHAPGRQ VSLLGELRAE GHSRRGSLRK LPQQPKLKRK bmy_10823T0/1-262 HSHLSGMKES LSKVHAPGHQ VSLLGELRAR GHSRRGSLRK LPQKPQLKRK 251 300 ENSP00000269127/1-236 RIKEAPETPE TEP------- ---------- --------- ENSBTAP00000047980/1-234 RIKEAPDTPE TCL------- ---------- --------- ENSTTRP00000008388/1-261 RIKEAPETPE SCPQ------ ---------- --------- bmy_10823T0/1-262 RIKEAPETPE TCSKEYPAGA EXQLALDPSA LVPEGLGDQ