KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:58:34 2014 Check: 00 .. Name: ENSP00000328938/1-308 Len: 417 Check: 1299 Weight: 1.00 Name: ENSTTRP00000010287/1-290 Len: 417 Check: 9851 Weight: 1.00 Name: bmy_13155T0/1-304 Len: 417 Check: 6800 Weight: 1.00 Name: BACU011565/1-344 Len: 417 Check: 9956 Weight: 1.00 Name: ENSBTAP00000048024/1-306 Len: 417 Check: 7969 Weight: 1.00 // 1 50 ENSP00000328938/1-308 MMDVSGVGFP SKVP-WKKMS AEELENQYCP SRWVVRLGAE EALRTYSQIG ENSTTRP00000010287/1-290 ---------- ---------- --ELENQYSP SRWVVRLGAE EALRTYSQIG bmy_13155T0/1-304 ------MSQI VLAPTW--MG QSDFFRLLLP ---------E VVLTATCPFL BACU011565/1-344 -MDGLGGGPK CGAP-WKRMS KEELENQYSP SRWVVRLGAE EALRTYSQIG ENSBTAP00000048024/1-306 -MDVSGGNHR HEAP-WKRMS KEELDNQYSP SRWVVRLGAE EAMRTYSQIG 51 100 ENSP00000328938/1-308 IEATTRARAT RKSLLHVPYG DGEGEKVDIY FPDESSEALP FFLFFHGGYW ENSTTRP00000010287/1-290 NEATKRAQAT GRNLLDVPYG DGEGEKLDIY FPEAVSEGLP FLVFFHGGYW bmy_13155T0/1-304 ETATKRAQAT GRNLLDVPYG DGEGEKLDIY FPEAVSEALP FLVFFHGGYW BACU011565/1-344 NEATKRAQAT GRNLLDVPYG DGEGEKLDIY FPEAVSEALP FLVFFHGGYW ENSBTAP00000048024/1-306 NEVTKRARAT GRSLLNVPYG DGDGEKLDIY LPEAVSEAMP FLVFFHGGYW 101 150 ENSP00000328938/1-308 QSGSKDESAF MVHPLTAQGV AVVIVAYGIA PKGTLDHMVD QVTRSVAFVQ ENSTTRP00000010287/1-290 QSGSKDSSAF MVGPLTAQGV AVVIVAYDVA PKGTLDQMVA QVTQSIVFVQ bmy_13155T0/1-304 QSGSKDSSAF MVSPLTAQGV AVVIVAYDIA PKGTLDQMVD QVTQSIVFVQ BACU011565/1-344 QSGSKDSSAF MVSPLTAQGV AVVIVAYDIA PK-------- ---------- ENSBTAP00000048024/1-306 QSGSKDTSAF MVNPLTAQGV AVVIVAYDIA PKGTLDQMVD QVTQSIMFVQ 151 200 ENSP00000328938/1-308 KRYPSNK--- ------GIYL CGHSAGAHLA AMMLLADWTK HGVTPNLRGF ENSTTRP00000010287/1-290 KQYPGNQ--- ------GIYL CGHSAGAHLA AMMLLANWTK HGVTPNLIXX bmy_13155T0/1-304 KQYPGNQWLS ALTHPRGIYL CGHSAGAHLA AMMLLANWTK RGVTPNLKGF BACU011565/1-344 ---------- ---------- ---------- ---------- --------GF ENSBTAP00000048024/1-306 KQYPGNQ--- ------GIYL CGHSAGAHLA AMMLLADWTK HGVTPNLKGF 201 250 ENSP00000328938/1-308 FLVSGVFDLE PIVYTSQNVA LQLTLEDAQR NSPQ--LKVA QAQPVDPTCR ENSTTRP00000010287/1-290 XXXXXXXXXX XXXXXXXXXX XXXXXEDAQR NSPQWHVKTA PTQPVDPACR bmy_13155T0/1-304 FLVSGIYDLE PVMHTSENAP LLTTLEDAQR NSPQWHLKTA PTQPVDPACR BACU011565/1-344 FLVSGIYDLE PVMHTSENAP LLTTLEDAQR NSPQWRLKTS PTQPVDPACH ENSBTAP00000048024/1-306 FLLSGVYDLE PIMHTSENAP LLPALEDAQR NSPLWQLETA PTQPADPACR 251 300 ENSP00000328938/1-308 VLVVVGQFDS PEFHRQSWEF YQVLPVQTLC QGEWKASFEE LHDVDHFEIV ENSTTRP00000010287/1-290 ILVTVGQHDS PEFHRQSREL YQVPPAPTLR RGGWKVSFEE LHDVDHFEIL bmy_13155T0/1-304 VLVTVGQHDS PEFHRQSREF YQ-----TLR QGGWKASFEE LHDVDHFEIL BACU011565/1-344 ILVTVGQHDS PEFHRQSREF YQ-----TLR RGGWKASFEE LHDVDHFETL ENSBTAP00000048024/1-306 ILVTVGQHDS PEFHRQSREF YQ-----TLC QGGWKASFEE LHDMDHFEIL 301 350 ENSP00000328938/1-308 ENLTQKDNVL TQII------ ---------- ---------- ---------- ENSTTRP00000010287/1-290 WNLTQKDYVL TQII------ ---------- ---------- ---------- bmy_13155T0/1-304 WNLTQKDYVL TQVG------ ---------- ---------- ---------- BACU011565/1-344 WNLTQKDYVL TQMAAAGFIH CPTENEPDLA QCFFCFKELE GWEPDDDPIE ENSBTAP00000048024/1-306 WNLTQEDYVL TQII------ ---------- ---------- ---------- 351 400 ENSP00000328938/1-308 ---------- ---LKTIFQ- ---------- ---------- ---------- ENSTTRP00000010287/1-290 ---------- ---LKTIFQE ---------- ---------- ---------- bmy_13155T0/1-304 ---------- --RIPSLWTE CVLL------ ---------- ---------- BACU011565/1-344 EHKKHSSGCA FLSVKKQFEE LTLSEFLKLD KERAKNKIAK ETNNKQKEFE ENSBTAP00000048024/1-306 ---------- ---LKTIFQE S--------- ---------- ---------- 401 450 ENSP00000328938/1-308 ---------- ------- ENSTTRP00000010287/1-290 ---------- ------- bmy_13155T0/1-304 ---------- ------- BACU011565/1-344 ETAKKVRCAI EQLAASE ENSBTAP00000048024/1-306 ---------- -------