KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:58:34 2014 Check: 00 .. Name: bmy_22540T0/1-209 Len: 316 Check: 7071 Weight: 1.00 Name: BACU017261/1-209 Len: 316 Check: 5971 Weight: 1.00 Name: ENSP00000378516/1-305 Len: 316 Check: 5697 Weight: 1.00 Name: ENSBTAP00000048050/1-316 Len: 316 Check: 9153 Weight: 1.00 // 1 50 bmy_22540T0/1-209 ---------- ---------- ---------- ---------- ---------- BACU017261/1-209 ---------- ---------- ---------- ---------- ---------- ENSP00000378516/1-305 ---------M EFVFLAYPSC PELHILSFLG VSLVYGLIIT GNILIVVSIH ENSBTAP00000048050/1-316 MSWGNHSLWM EFVFLAYPSQ SEPRILSFLG VSLVYTWVIT GNVLIMVAIQ 51 100 bmy_22540T0/1-209 ---------- ----MLHGCD ------GAPH -PGNILQSAK TVPLLGCATQ BACU017261/1-209 ---------- ----MLHGCG ------GAPH -PGNILQSAK TISLPGCATQ ENSP00000378516/1-305 TETCLCTSMY YFLGSLSGIE ICYTAVVVPH ILANTLQSEK TITLLGCATQ ENSBTAP00000048050/1-316 TEARLHTPMY YFLGSLSGVE IGYTAVVVPH LLANILRSEK TITLLGCATQ 101 150 bmy_22540T0/1-209 IDFLTGFGSA DRFLLAIMAY DRYVAICHPL RYPLILTLTL CVRLVAASVV BACU017261/1-209 MVFLTGFGSA DRFLLAIMAY DRYVAICHPL RYPLILTLTL CVRLVAASVV ENSP00000378516/1-305 MAFFIALGSA DCFLLAAMAY DRYVAICHPL QYPLLMTLTL CVHLVVASVI ENSBTAP00000048050/1-316 MGFFIGLGSA DCFLLASMAY DRHAAICHPL QYPLIMPRTL CARLVVASVV 151 200 bmy_22540T0/1-209 IGLFLSLQLV VFIFSLPFCP ARNIEHFFCD AQPVMRLVSA NSLFREQSVR BACU017261/1-209 IGLFLSLQLV VFIFSLPFCP ARNIEHFFCD AQPVMRLVSA NSLFCEQSVR ENSP00000378516/1-305 SGLFLSLQLV AFIFSLPFCQ AQGIEHFFCD VPPVMHVVCA QSHIHEQSVL ENSBTAP00000048050/1-316 LGLCLSFQLV AFVFSLPFCP ARGIQHFYCD VPPVMCLVCA QSHRHEQSVL 201 250 bmy_22540T0/1-209 VAATLAIAVP FFSITTSYAF TVAAVLRIRS AAGRHRAFST RSSRPTVVLL BACU017261/1-209 VATTLAIAVP FFFITTSYAF PVAAVLRICS AAGRHWAFST CSSRPTVVLL ENSP00000378516/1-305 VAAILAIAVP FFLITTSYTF IVAALLKIHS AAGRHRAFST CSSHLTVVLL ENSBTAP00000048050/1-316 VAATLAIAVP FLLIAASYAS IVAAVFRAHS ASGRRRAFST CSSHLAVVLL 251 300 bmy_22540T0/1-209 QYGCCTFMYV CPSSSYYPKR DQFVSLVYTL ---------- ---------- BACU017261/1-209 QYGCCTFMYR CPSSSYYPKQ DQFVSLVYTL ---------- ---------- ENSP00000378516/1-305 QYGCCAFMYL CPSSSYNPKQ DRFISLVYTL GTPLLNPLIY ALRNSEMKGA ENSBTAP00000048050/1-316 QYCCCAFMYL RPSSSYHPEQ DQFVSLVYTL GTPLLNPFVY TLRNSEMKEA 301 350 bmy_22540T0/1-209 ---------- ------ BACU017261/1-209 ---------- ------ ENSP00000378516/1-305 VGRVLTRNCL SQNS-- ENSBTAP00000048050/1-316 IARVLARSCL PREKLG