KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:58:34 2014 Check: 00 .. Name: ENSP00000303356/1-244 Len: 244 Check: 4493 Weight: 1.00 Name: ENSBTAP00000048055/1-244 Len: 244 Check: 6884 Weight: 1.00 Name: BACU011635/1-191 Len: 244 Check: 4803 Weight: 1.00 Name: bmy_02238T0/1-244 Len: 244 Check: 6129 Weight: 1.00 Name: ENSTTRP00000001487/1-244 Len: 244 Check: 5681 Weight: 1.00 // 1 50 ENSP00000303356/1-244 MELFLAGRRV LVTGAGKGIG RGTVQALHAT GARVVAVSRT QADLDSLVRE ENSBTAP00000048055/1-244 MDLRLAGRRA LVTGAGKGIG RSIVKALHAA GARVVAVSRT QADLDSLVRE BACU011635/1-191 MELSFAGRRA LVTGAGKG-G PGAAAK---- ---------- ---------- bmy_02238T0/1-244 MESSLAGRRA LVTGAGKGIG RSTVQALHAA GAQVVAVSRT QADLDSLVRE ENSTTRP00000001487/1-244 MELSLAGRRA LVTGAGKGIG RSTVQALHAA GAQVVAVSRT QADLDSLVRE 51 100 ENSP00000303356/1-244 CPGIEPVCVD LGDWEATERA LGSVGPVDLL VNNAAVALLQ PFLEVTKEAF ENSBTAP00000048055/1-244 CPGVETVCVD LADWEATEQA LGGVGPVDLL VNNAAVAFLQ PFLEVTKEAY BACU011635/1-191 ----EPVCVD LGDWEATERA LGGVGPVDLL VNNAAVALLQ PFLEVTKEAC bmy_02238T0/1-244 CPGVEPVCVD LGDWEATERA LGGVGPVDLL VNNAAVALLQ PFLEVTKEAC ENSTTRP00000001487/1-244 CPGVEPVCVD LGDWEATERA LGGVGPVDLL VNNAAVALLQ PFLEVTKEAC 101 150 ENSP00000303356/1-244 DRSFEVNLRA VIQVSQIVAR GLIARGVPGA IVNVSSQCSQ RAVTNHSVYC ENSBTAP00000048055/1-244 DMSFSVNLRA VIQVSQIVAR GLIARGAPGV IVNVSSQASQ RGLTNHSVYC BACU011635/1-191 DTSFDVNLRA VIQVSQIVAR GLIARGAPGS IVNVSSQASQ RAVTNHSVYC bmy_02238T0/1-244 DTSFDVNLRA VIQVSQIVAR GLIARGAPGS IVNVSSQASQ RALTNHSVYC ENSTTRP00000001487/1-244 DTSFDVNLRA VIQVSQIVAR GLIARGAPGS IVNVSSQASQ RALTNHSVYC 151 200 ENSP00000303356/1-244 STKGALDMLT KVMALELGPH KIRVNAVNPT VVMTSMGQAT WSDPHKAKTM ENSBTAP00000048055/1-244 STKGALDTLT KVMAVELGPH KIRVNAVNPT VVMTPMGQAA WSDPQKAKAM BACU011635/1-191 STKGALDMLT KVMALELGPH QIRVNALNPT VVMTPMGQAN WSDPQKAKTM bmy_02238T0/1-244 STKGALDMLT KVMALELGPH QIRVNALNPT VVMTPMGQAN WSDPXKAKTM ENSTTRP00000001487/1-244 STKGALDMLT KVMALELGPH QIRVNALNPT VVMTPMGQAN WSDPQKAKTM 201 250 ENSP00000303356/1-244 LNRIPLGKFA EVEHVVNAIL FLLSDRSGMT TGSTLPVEGG FWAC ENSBTAP00000048055/1-244 LDRIPLGRFA EVENVVDTIL FLLSDRSSMT TGSTVPVDGG FLAT BACU011635/1-191 LDRIPLGRFA ---------- ---GESGGSP AGS------- ---- bmy_02238T0/1-244 LDRIPLGRFA EVENVVDTIL FLLSDRSSMT TGSTVPVDGG FLAT ENSTTRP00000001487/1-244 LDRIPLGKFA EVENVVDTIL FLLSDRSSMT TGSTVPVDGG FLAT