KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:58:37 2014 Check: 00 .. Name: ENSTTRP00000001395/1-792 Len: 845 Check: 3586 Weight: 1.00 Name: ENSP00000257700/1-792 Len: 845 Check: 4286 Weight: 1.00 Name: ENSBTAP00000048133/1-792 Len: 845 Check: 8748 Weight: 1.00 Name: bmy_10588T0/1-743 Len: 845 Check: 3194 Weight: 1.00 Name: BACU006873/1-696 Len: 845 Check: 4552 Weight: 1.00 // 1 50 ENSTTRP00000001395/1-792 ---------- ---------- ---------- ---------- ---------- ENSP00000257700/1-792 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000048133/1-792 ---------- ---------- ---------- ---------- ---------- bmy_10588T0/1-743 LGGEEETRET AEEVAVALGA TVSKLYGCLI AGRSQSPLAT LAAQGAEDSH BACU006873/1-696 ---------- ---------- ---------- ---------- ---------- 51 100 ENSTTRP00000001395/1-792 ---MLLAGDF GKAPAARCCS ENGDQRKNIK EKSDINIAAV FGNQQSCEST ENSP00000257700/1-792 ---MLPAGEI GASPAAPCCS ESGDERKNLE EKSDINVTVL IGSKQVSEGT ENSBTAP00000048133/1-792 ---MLPAGEI GEPPVTPCCS ENGDQKKNLK EKSDISIAAL VENEQVCEGT bmy_10588T0/1-743 GGRMLLAGDF GKAPATRYCS ENGDQRKNIN EKSDINIAAL VGNEPVCEGT BACU006873/1-696 ---MLLAGDF GKAPATRCCS ENGDQRKNIK EKSDINIAAL VGNERVCEGT 101 150 ENSTTRP00000001395/1-792 IMVDLPSYVA VFIEKEVGND LKSLKKLDKL IEQMTESKMQ LEEQVLTVSS ENSP00000257700/1-792 DNGDLPSYVS AFIEKEVGND LKSLKKLDKL IEQRTVSKMQ LEEQVLTISS ENSBTAP00000048133/1-792 DNGDLPSCVS AFIEKEVGND LKSLKKLDKL IEQMTENKMQ LEEQVLTVSS bmy_10588T0/1-743 DNGDLPSYVA EFIEKEVGND LKSLKKLDKL IEQMTEKQTC IL-KVLTVSS BACU006873/1-696 DNGDLPSYVA EFIEKEVGND LKSLKKLDKL IEQMTESKMQ LEEQ--AISS 151 200 ENSTTRP00000001395/1-792 EIPKRIQSAL KNAEESKQFL NHFLEQESHL FSSINSHLLT AQPWIEDLGA ENSP00000257700/1-792 EIPKRIRSAL KNAEESKQFL NQFLEQETHL FSAINSHLLT AQPWMDDLGT ENSBTAP00000048133/1-792 EIPKRIHTAL KKAEESKQFL NQFLEQETHL FSSINSHLLT AQPWMEDLGA bmy_10588T0/1-743 EIPKRIQSAL KNAEESKQFL NHFLEQESHL FSSINSHLLT AQPWIEDLGA BACU006873/1-696 EIPKRIQSAL KNAEESKQFL NHFLEQESHL FSSINSHLLT AQPWIEDLGA 201 250 ENSTTRP00000001395/1-792 MINQIEEIER HLAYLRWISQ IEELXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000257700/1-792 MISQIEEIER HLAYLKWISQ IEELSDNIQQ YLMTNNVPEA ASTLVSMAEL ENSBTAP00000048133/1-792 MINQIEEIER HLAYLKWISQ IEELSDNIQQ YLMTNNVPEA ASTLVFMAEL bmy_10588T0/1-743 MINQIEEIER HLAYLKWISQ IEELSDNIQQ YLMTNNVLEA ASTLVSMAEL BACU006873/1-696 MINQIEEIER HLAYLKWISQ IEELSDNIQQ YLMTNNVLEA ASTLVSMAEL 251 300 ENSTTRP00000001395/1-792 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXDFEEIFA QLHWPFIAPP ENSP00000257700/1-792 DIKLQESSCT HLLGFMRATV KFWHKILKDK LTSDFEEILA QLHWPFIAPP ENSBTAP00000048133/1-792 DIKLQESSCT HLLGFMRATV KFWHKILKDK LTSDFEEILA QLHWPFIAPS bmy_10588T0/1-743 DIRLQESSCT HLLGFMRATV KFWHKILKDK LTRQ------ ---------- BACU006873/1-696 DIKLQESSCT HLLGFMRATV KFWHKILKDK LTRQ------ ---------- 301 350 ENSTTRP00000001395/1-792 QSQTVGISRP ASAPEIYSNL ETLFSQLLKL QTSDELLTET KQLPEKYSLP ENSP00000257700/1-792 QSQTVGLSRP ASAPEIYSYL ETLFCQLLKL QTSDELLTEP KQLPEKYSLP ENSBTAP00000048133/1-792 QSPTVGISRP ASAPEIYSNL ETLFCQLLKL QTSDELFTEP KQLPEKYSLP bmy_10588T0/1-743 ---------- ----EIYPYF ---------- ---------- ---------- BACU006873/1-696 ---------- ----EIYPYF ---------- ---------- ---------- 351 400 ENSTTRP00000001395/1-792 ASPAVILPIQ IMLTPLQKRF RYHFRGNRQT NVISKPEWYL AQVLMWIGNH ENSP00000257700/1-792 ASPSVILPIQ VMLTPLQKRF RYHFRGNRQT NVLSKPEWYL AQVLMWIGNH ENSBTAP00000048133/1-792 TSPSVILPIQ IMLTPLQKRF RYHFRGNRQT NVISKPEWYL AQVLLWIGNH bmy_10588T0/1-743 ---------- ---------- ---------- ----MPEWYL AQVLMWIGNH BACU006873/1-696 ---------- ---------- ---------- ----MPEWYL AQVLMWIGNH 401 450 ENSTTRP00000001395/1-792 TQFLDEKIQP ILDKVGSSVN ARLEFSRGLM MLVLEKLAAD IPCLLYDDSL ENSP00000257700/1-792 TEFLDEKIQP ILDKVGSLVN ARLEFSRGLM MLVLEKLATD IPCLLYDDNL ENSBTAP00000048133/1-792 TQFLDEKIQP ILDKVGSSVN ARLEFSRGLM MLILEKLAAD IPCLLYDDNL bmy_10588T0/1-743 TQFLDEKIQP ILDKVGSSVN ARLEFSRGLM MLVLEKLAAD IPCLLYDDSL BACU006873/1-696 TQFLDEKIQP ILDKVGSSVN ARLEFSRGLM MLVLEKLAAD IPCLLYDDSL 451 500 ENSTTRP00000001395/1-792 FCHLVDEVLL FERELHSVHG YPSTFANCMH ILSEETCFQR WLTVERKFAL ENSP00000257700/1-792 FCHLVDEVLL FERELHSVHG YPGTFASCMH ILSEETCFQR WLTVERKFAL ENSBTAP00000048133/1-792 FCHLVDEVLL FEKELHSVHG YPSTFANCMH ILSEETCFQR WLTVERKFAL bmy_10588T0/1-743 FCHLVDEVLL FERELHSVHG YPSTFANCMH ILSEETCFQR WLTVERKFAL BACU006873/1-696 FCHLVDEVLL FERELHSVHG YPSTFANCMH ILSEETCFQR WLTVERKFAL 501 550 ENSTTRP00000001395/1-792 QKMDSMLSSE AAWISQYKDI TDVDEMKVPD CAETFMTLLL VITDRYKNLP ENSP00000257700/1-792 QKMDSMLSSE AAWVSQYKDI TDVDEMKVPD CAETFMTLLL VITDRYKNLP ENSBTAP00000048133/1-792 QKMDSMLSSE AAWISQYKDI TDVDEMKVPD CAETFMTLLL VITDRYKNLP bmy_10588T0/1-743 QKMDSMLSSE AAWISQYKDI TDVDEMKVPD CAETFMTLLL VITDRYKNLP BACU006873/1-696 QKMDSMLSSE AAWISQYKDI TDVDEMKVPD CAETFMTLLL VITDRYKNLP 551 600 ENSTTRP00000001395/1-792 TASRKLQFLE LQKDLVDDFR IRLTQVMKEE TRASLGFRYC AILNAVNYIS ENSP00000257700/1-792 TASRKLQFLE LQKDLVDDFR IRLTQVMKEE TRASLGFRYC AILNAVNYIS ENSBTAP00000048133/1-792 TASRKLQFLE LQKDLVDDFR IRLTQVMKEE TRASLGFRYC AILNAVNYIS bmy_10588T0/1-743 AASRKLQFLE LQKDLVDDFR IRLTQVMKEE TRASLGFRYC AILNAVNYIS BACU006873/1-696 AASRKLQFLE LQKDLVDDFR IRLTQVMKEE TRASLGFRYC AILNAVNYIS 601 650 ENSTTRP00000001395/1-792 TVLADWADNV FFLQLQQAAL EVFAENNTLS KLQLGQLASM ESSVFDDMIN ENSP00000257700/1-792 TVLADWADNV FFLQLQQAAL EVFAENNTLS KLQLGQLASM ESSVFDDMIN ENSBTAP00000048133/1-792 TVLADWADNV FFLQLQQAAL EVFAENNTLS KLQLGQLASM ESSVFDDMIN bmy_10588T0/1-743 TVLADWADNV -------AAL EVFAENNTLS KLQLGQLASM ESSVFDDMIN BACU006873/1-696 TVLADWADNV FFLQLQQAAL EVFAENNTLS KLQLGQLASM ESSVFDDMIN 651 700 ENSTTRP00000001395/1-792 LLERLKHDML TRQVDHVFRE VKDAAKLYKK ERWLSLPSQS EQAVMSLSSS ENSP00000257700/1-792 LLERLKHDML TRQVDHVFRE VKDAAKLYKK ERWLSLPSQS EQAVMSLSSS ENSBTAP00000048133/1-792 LLERLKHDML TRQVDHVFRE VKDAAKLYKK ERWLSLPSQS EQAVMSLSSS bmy_10588T0/1-743 LLERLKHDML TRQVDHVFRE VKDAAKLYKK ERWLSLPSQS EQAVMSLSSS BACU006873/1-696 LLERLKHDML TRQVDHVFRE VKDAAKLYKK ERWLSLPSQS EQAVMSLSSS 701 750 ENSTTRP00000001395/1-792 ACPLLLTLRD RLLQLEQQLC FSLFKIFWQM LVEKLDIYIY QEIILANHFN ENSP00000257700/1-792 ACPLLLTLRD HLLQLEQQLC FSLFKIFWQM LVEKLDVYIY QEIILANHFN ENSBTAP00000048133/1-792 ACPLLLTLRD RLLQLEQQLC FSLFKVFWQM LVEKLDIYIY QEIILANHFN bmy_10588T0/1-743 ACPLLLTLRD RLLQLEQQLC FSLFKIFWQM LVEKLDIYIY QEIILANHFN BACU006873/1-696 ACPLLLTLRD RLLQLEQQLC FSLFKIFWQM LVEKLDIYIY QEIILANHFN 751 800 ENSTTRP00000001395/1-792 EGGAAQLHFD MTRNLFPLFS HYCKRPENYF KHVKEACIVL NLNTGCALLL ENSP00000257700/1-792 EGGAAQLQFD MTRNLFPLFS HYCKRPENYF KHIKEACIVL NLNVGSALLL ENSBTAP00000048133/1-792 EGGAAQLHFD MTRNLFPLFS HYCKRPENYF KHVKEACILL NLNVGSALLL bmy_10588T0/1-743 EGGAAQLHFD MTRNLFPLFS HYCKRPENYF KHVKEACIVL NLNTGSALLL BACU006873/1-696 EGGAAQLHFD MTRNLFPLFS HYCKRPENYF KHVKEACIVL NLNTGSALLL 801 850 ENSTTRP00000001395/1-792 RDVLQSTSGQ PPATAALNEV GIYKLAQQDV EILLNLRTNW PNTGK ENSP00000257700/1-792 KDVLQSASGQ LPATAALNEV GIYKLAQQDV EILLNLRTNW PNTGK ENSBTAP00000048133/1-792 RDVLQSTSGQ PPATAALNEV GIYKLAQQDV EILLNLRTNW PNTGK bmy_10588T0/1-743 RDVLQSTSGQ PPATAALNEV GIYKLAQQDV EILLNLRTNW PNTGK BACU006873/1-696 RDILQSTSGQ PPATAALNEV GIYKLAQQDV EILLNLRTNW PNTGK