KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:58:39 2014 Check: 00 .. Name: ENSP00000379294/1-416 Len: 619 Check: 2761 Weight: 1.00 Name: ENSTTRP00000001435/1-416 Len: 619 Check: 4828 Weight: 1.00 Name: bmy_19863T0/1-593 Len: 619 Check: 1779 Weight: 1.00 Name: ENSBTAP00000048190/1-353 Len: 619 Check: 191 Weight: 1.00 // 1 50 ENSP00000379294/1-416 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000001435/1-416 ---------- ---------- ---------- ---------- ---------- bmy_19863T0/1-593 MKLEHWWNYE EGVAGERQAN REEQQADETQ VRCSREKDEN ERGDGVKSGR ENSBTAP00000048190/1-353 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000379294/1-416 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000001435/1-416 ---------- ---------- ---------- ---------- ---------- bmy_19863T0/1-593 GFDDSSEWVF DSQGPARPGN LPLCAPLHPA ALHSPLPSPP PLPPARARAR ENSBTAP00000048190/1-353 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000379294/1-416 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000001435/1-416 ---------- ---------- ---------- ---------- ---------- bmy_19863T0/1-593 ARAGARAGAG ARALAAPGRS TRRRLLPPFA RGRRQYAQPS SDPFSPDEDR ENSBTAP00000048190/1-353 ---------- ---------- ---------- ---------- ---------- 151 200 ENSP00000379294/1-416 -MSISLSSLI LLPIW----- ---------- ---------- ---------- ENSTTRP00000001435/1-416 -MSISLRSLI LLPIW----- ---------- ---------- ---------- bmy_19863T0/1-593 RRPVFPLSIF SSSCWNRSRC HLKTPQAGEA LITISLTKFS RALQRQNDTG ENSBTAP00000048190/1-353 ---------- ---------- ---------- ---------- ---------- 201 250 ENSP00000379294/1-416 -INMAQIQQG GPDEKEKTTA LKDLLSR--- ------IDLD ELMKKDEPPL ENSTTRP00000001435/1-416 -ISMAHIQQG GPDEKEKTTA LKDILSR--- ------IDLD ELMKKDEPPL bmy_19863T0/1-593 MFQQFNIRSS SPILPRPVKG LVQLITRAQW LPVTQELSFR KFIEQ----- ENSBTAP00000048190/1-353 ---------- ---------- ---------- ------LSFR KFIEQ----- 251 300 ENSP00000379294/1-416 DFPDTLEGFE YAFNEKGQLR HIKTGEPFVF NYREDLHRWN QKRYEALGEI ENSTTRP00000001435/1-416 DFPDTLEGFE YAFNEXXXXR HIKTGEPFVF NYREDLHRWN QKRYEALGEI bmy_19863T0/1-593 --SDLLEELK YDFNEKAELR HTETHRPFVF NYYKNVLERN SKRYQALGHL ENSBTAP00000048190/1-353 --SDLLEELK YDFNEKAELR HTETHGPFAF NYYKNVLERN SKRYWALGHL 301 350 ENSP00000379294/1-416 ITKYVYELLE KDCNLKKVSI PVDATESEPK SFIFMSEDAL TNPQK-LMVL ENSTTRP00000001435/1-416 ITKYVYELLE KDCNLKKISI PVDASESEPK SFIFMSEDAL TNPQK-LMVL bmy_19863T0/1-593 LEQYIYELLE KVCKLQKVYI PPEA-DKEPR SFFFMSERAL TNHHSALLVL ENSBTAP00000048190/1-353 LEQYIYELLE KVCKLQKVYI PPEA-DKEPR SFFFMSERAL SNHHSALLVL 351 400 ENSP00000379294/1-416 IHGSGVVRAG QWARRLIINE DLDSGTQIPF IKRAVAEGYG VIVLNPNENY ENSTTRP00000001435/1-416 IHGSGVVRAG QWARRLIINE DLDSGTQIPF IKRAMDEGYG VIVLNPNENY bmy_19863T0/1-593 LQDRGVFRAG QWSQQAVIHH GLQHGSQIPC IQMALQAHYE VIVLNPNDNF ENSBTAP00000048190/1-353 LQDHGVFRAG QWSQQAIIHH GLQHGSQIPC IQMALQAHYD VIVLNPNDNF 401 450 ENSP00000379294/1-416 IEVEKPKIHV QSSSDSSDEP AEKRERKDKV SKETKKRRDF YEKYRNPQRE ENSTTRP00000001435/1-416 IEVEKPKIHV QSSSDSSDEP AEKRERKDKV SKETKKRRDF YEKYRNPQRE bmy_19863T0/1-593 VDLQTEK--- -------EWK GLLTQNVESS SRKMVQTESF X------SLQ ENSBTAP00000048190/1-353 VDQQTGE--- -------EWK GLLTQNGEFA SKKMVQTKSF F------SLQ 451 500 ENSP00000379294/1-416 KEMMQLYIRE NGSPEEHAIY VWDHFIAQAA AENVFFVAHS YGGLAFVELM ENSTTRP00000001435/1-416 KEMMQLYIRE NGSPEEHAVY VWDHFIAQSA AENVFFVAHS YGGLAFVELM bmy_19863T0/1-593 QSLQCIPKRC SNTPEEHMAY IWDYFISKAE GKDVAFIVHG YGGLVFMDLL ENSBTAP00000048190/1-353 ESLQCIPKRC SNTPEEHMAY IWDYFISKTE GKDVAFIVHG YGGLVFMDLL 501 550 ENSP00000379294/1-416 IQREADVKNK VTAVALTDSV HNVWHQEAGK TIR--EWMRE NCCNWVSSSE ENSTTRP00000001435/1-416 IQREADVKSK VTAVALTDSV HNVWHQEAGK TIR--EWMRE NCCNWVSSSE bmy_19863T0/1-593 VRRKWEVMSK VYAVALIDSE HHVGHQ-LGS DIQLLAWIKH HCREWVTSPK ENSBTAP00000048190/1-353 VRKKWDVMSK VYAVALIDSE HHVGHQ-LGR DVQLLEWIKQ HCREWVTSPK 551 600 ENSP00000379294/1-416 PLDTSVESML -PDCPRVSAG TDRHELTSWK SFPSIFKFFT EASEAKTS-- ENSTTRP00000001435/1-416 PLDTSVESML -PDCPRVSAG TDRHELTSWK SFPSIFLFFT DASDAKTS-- bmy_19863T0/1-593 PLDKPAATVL KKEFPMVSAG TEKHNLAPSS SLQSIFKYFR KALKAKAAIN ENSBTAP00000048190/1-353 PLDKPATTVL KKEFPIVSAG TEKHNLAPSS SLQSIFKYFR KALKAKAA-N 601 650 ENSP00000379294/1-416 -SLKPAVTRR SHRIKHEEL ENSTTRP00000001435/1-416 -SLKPTLTRR SHLIIHQDL bmy_19863T0/1-593 FSRVPIVTRS STKRKQSA- ENSBTAP00000048190/1-353 FSRVSIVTRS STKRK----