KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:58:41 2014 Check: 00 .. Name: ENSP00000360828/1-796 Len: 796 Check: 1970 Weight: 1.00 Name: ENSBTAP00000048220/1-765 Len: 796 Check: 8988 Weight: 1.00 Name: bmy_02925T0/1-649 Len: 796 Check: 229 Weight: 1.00 Name: BACU011343/1-764 Len: 796 Check: 5508 Weight: 1.00 Name: ENSTTRP00000004033/1-792 Len: 796 Check: 8146 Weight: 1.00 // 1 50 ENSP00000360828/1-796 MVLAQRRRGG CEKLRAGPQA VLASGSGFCD NMLADLGLIG TIGEDDEVPV ENSBTAP00000048220/1-765 ---------- ---------- ---------- -MLSELGFIR TIGEDEDVQV bmy_02925T0/1-649 ---------- ---------- ---------- -MLAELGLIG TIGEDDEVPV BACU011343/1-764 ---------- ---------- ---------- -MFAELGLIG TIGEDDEVPV ENSTTRP00000004033/1-792 ---AQAQLRG GRGNRRAAPA GLVSGSGCCG DMLAELGLIG TIGEDDEVPV 51 100 ENSP00000360828/1-796 EPESDSGDEE EEGPIVLGRR QKALGKNRSA DFNPDFVFTE KEGTYDGSWA ENSBTAP00000048220/1-765 EPETDSEDEE EEGPIVLGRK QKALQKNRSA DFNPDFVFTE KEGMYDGSWA bmy_02925T0/1-649 EPETDSEDQE EEGPIVLGRK QKALQKNRSA DFNPDFIFTE KEGMYDGSWA BACU011343/1-764 EPETDSEDQE EEGPIVLGRK QKALQKNRSA DFNPDFIFTE KEGMYDGSWA ENSTTRP00000004033/1-792 EPETDSEDQE EEGPIVLGRK QKALQKNRSA DFNPDFVFTE KEGMYDGSWA 101 150 ENSP00000360828/1-796 LADVMSQLKK KRAATTLDEK IEKVRKKRKT EDKEAKSGKL EKEKEAKEGS ENSBTAP00000048220/1-765 MADVLSQLKK KRAATTLDEK IEKVRKKRKT EDKEAKSGKS EKEKEAKEGS bmy_02925T0/1-649 MADVMSQLKK KRAATTLDEK IEKVRKKRKT EDKEAKSGKS EKEKEAKKGS BACU011343/1-764 MADVMSQLKK KRAATTLDEK IEKVRKKRKT EDKEAKSGKS EKEKEAKEGS ENSTTRP00000004033/1-792 MADVMSQLKK KRAATTLDEK IEKVRKKRKT EGKEAKSGKL EKEKEAKEGS 151 200 ENSP00000360828/1-796 EPKEQEDLQE NDEEGSEDEA SETDYSSADE NILTKADTLK VKDRKKKKKK ENSBTAP00000048220/1-765 EPEEEEDLER KDVEASEDEE SETDYSSADE NILTKADTLK IKERKKKKKK bmy_02925T0/1-649 EPEEQEDFEG KDEEATEDEE SETDYSSADE NVLTKAG--- ---RRYCQKW BACU011343/1-764 EPEEQKDFEG KDEEATEDEE SETDYSSADE NVLTKADTLK VKEQKKKKK- ENSTTRP00000004033/1-792 EPEEQEDFEG KDEEATEDEE SETDYSSADE NILTKADTLK VKEQKKKKK- 201 250 ENSP00000360828/1-796 GQEAGGFFED ASQYDENLSF QDMNLSRPLL KAITAMGFKQ PTPIQKACIP ENSBTAP00000048220/1-765 GQEAGGFFED ASQYDENLSF QDMNLSRPLL KAITAMGFKQ PTPIQKACIP bmy_02925T0/1-649 GQEIG----- ---------- ---------- -AITAMGFKE PTPIQKACIP BACU011343/1-764 GQDAGGFFED ASQYDENLSF QDMNLSRPLL KAITAMGFKE PTPIQKACIP ENSTTRP00000004033/1-792 GQEAGGFFED ASQYDENLSF QDMNLSRPLL KAITAMGFKE PTPIQKACIP 251 300 ENSP00000360828/1-796 VGLLGKDICA CAATGTGKTA AFALPVLERL IYKPRQAPVT RVLVLVPTRE ENSBTAP00000048220/1-765 VGLLGKDICA CAATGTGKTA AFALPVLERL IYKPRQAPVT RVLVLVPTRE bmy_02925T0/1-649 VGLLGKDICA CAATGTGKTA AFALPVLERL IYKPRQAPVT RVLVLVPTRE BACU011343/1-764 VGLLGKDICA CAATGTGKTA AFALPVLERL IYKPRQAPVT RVLVLVPTRE ENSTTRP00000004033/1-792 VGLLGKDICA CAATGTGKTA AFAIPVMERL IYTPRQAPMT RVLVLVPTRE 301 350 ENSP00000360828/1-796 LGIQVHSVTR QLAQFCNITT CLAVGGLDVK SQEAALRAAP DILIATPGRL ENSBTAP00000048220/1-765 LGIQVHSVTK QLAQFCSITT CLAVGGLDVK SQEAALRAAP DILIATPGRL bmy_02925T0/1-649 LGIQVHSVTK QLAQFCSVTT CLAV------ --------AP DILIATPGRL BACU011343/1-764 LGIQVHSVTR QLAQFCSVTT CLAVGGLDVK SQEVALRAAP DILIATPGRL ENSTTRP00000004033/1-792 LGIQVHSVTK QLAQFCSITT CLAVGGLDVK SQEAALRAAP DILIATPGRL 351 400 ENSP00000360828/1-796 IDHLHNCPSF HLSSIEVLIL DEADRMLDEY FEEQMKEIIR MCSHHRQTML ENSBTAP00000048220/1-765 IDHLHNCPSF HLSSIEVLIL DEADRMLDEY FEEQMKEIIR MCSHHRQTML bmy_02925T0/1-649 IDHLHNCPSF HLSSIEVLIL DEADRMLDEY FEEQMKEIIR LCSHHRQTML BACU011343/1-764 IDHLHNCPSF HLSSIEVLIL DEADRMLDEY FEEQMKEIIR MCSHHRQTML ENSTTRP00000004033/1-792 IDHLHNCPSF HLSSIEVLIL DEADRMLDEY FEEQMKEIIR MCSHHRQTML 401 450 ENSP00000360828/1-796 FSATMTDEVK DLASVSLKNP VRIFVNSNTD VAPFLRQEFI RIRPNREGDR ENSBTAP00000048220/1-765 FSATMTDEVK DLASVSLKNP VRIFVNSNTD VAPFLRQEFI RIRPNREGDR bmy_02925T0/1-649 FSATMTDEVK DLASVSLKNP VRIFVNSNTD VAPFLRQEFI RIRPNREGDR BACU011343/1-764 FSATMTDEVK DLASVSLKNP VRIFVNSNTD VAPFLRQEFI RIRPNREGDR ENSTTRP00000004033/1-792 FSATMTDEVK DLASVSLKNP VRIFVNSNTD VAPFLRQEFI RIRPNREGDR 451 500 ENSP00000360828/1-796 EAIVAALLTR TFTDHVMLFT QTKKQAHRMH ILLGLMGLQV GELHGNLSQT ENSBTAP00000048220/1-765 EAIVAALLMR TFTDHVMLFT QTKKQAHRMH ILLGLMGLQV GELHGNLSQT bmy_02925T0/1-649 EAIVAALLMR TFTDHVMLFT QTKKQAHRMH ILLGLMGLQV GELHGNLSQT BACU011343/1-764 EAIVAALLMR TFTDHVMLFT QTKKQAHRMH ILLGLMGLQV GELHGNLSQT ENSTTRP00000004033/1-792 EAIVAALLMR TFTDHVMLFT QTKKQAHRMH ILLGLMGLQV GELHGNLSQT 501 550 ENSP00000360828/1-796 QRLEALRRFK DEQIDILVAT DVAARGLDIE GVKTVINFTM PNTIKHYVHR ENSBTAP00000048220/1-765 QRLEALRRFK DEQIDILVAT DVAARGLDIE GVKTVINFTM PNTIKHYVHR bmy_02925T0/1-649 QRLEALRRFK DEQIDILVAT DVAARGLDIE GVKTVINFTM PNTIKHYVHR BACU011343/1-764 QRLEALRRFK DEQIDILVAT DVAARGLDIE GVKTVINFTM PNTIKHYVHR ENSTTRP00000004033/1-792 QRLEALRRFK DQQIDILVAT DVAARGLDID GVKTVINFTM PNTIKHYVHR 551 600 ENSP00000360828/1-796 VGRTARAGRA GRSVSLVGED ERKMLKEIVK AAKAPVKARI LPQDVILKFR ENSBTAP00000048220/1-765 VGRTARAGRA GRSVSLVGEE ERKMLKEIVK AAKAPVKARI LPQDVILKFR bmy_02925T0/1-649 VGRTARAGRA GXSVSLVGEE ERKMLKEIVK AAKAPVKART PPQ------- BACU011343/1-764 VGRTARAGRA GRSVSLVGEE ERKMLKEIVK AAKAPVKART PPQDVILKFR ENSTTRP00000004033/1-792 VGRTARAGRA GRSVSLVGEE ERKMLKEIVK AAKAPVKART PPQDVILKFR 601 650 ENSP00000360828/1-796 DKIEKMEKDV YAVLQLEAEE KEMQQSEAQI NTAKRLLEKG KEAVVQEPER ENSBTAP00000048220/1-765 DKIEKMEKDV YAVLQLEAEE KEMQKSEAQI NTAQRLLEKG KEAPNPEPER bmy_02925T0/1-649 ---------- ---------- ---------- ---------- ---------- BACU011343/1-764 DKIEKMEKDV YAVLQLEAEE KEMQKSEAQI NTAQRLLEKG KGAPNPEPER ENSTTRP00000004033/1-792 DKIEKMEKDV YAVLQLEAEE KEMQKSEAQI NTAQRLLEKG KGAPNPEPER 651 700 ENSP00000360828/1-796 SWFQTKEERK KEKIAKALQE FDLALRGKKK RKKFMKDAKK KGEMTAEERS ENSBTAP00000048220/1-765 SWFQTKEERK KEKIAKALQE FDLALRGKKK RKKFMKEAKK KGEMTAEERS bmy_02925T0/1-649 ---------- ---VAKALQE FDLAIRGKKK RKKFMKDVKK KGEMTADERS BACU011343/1-764 SWFQTKEERK KEKIAKALQE FDLAIRGKKK RKKFMKDVKK KGEMTADERS ENSTTRP00000004033/1-792 SWFQTKEERK KEKIAKALQE FDLAIRGKKK RKKFMKDVKK KGEMTADERS 701 750 ENSP00000360828/1-796 QFEILKAQMF AERLAKRNRR AKRARAMPEE EPVRGPAKKQ KQGKKSVFDE ENSBTAP00000048220/1-765 QFEILKAQMF AERLAKRNRR AKRARAMPEE EPVRAPAKKQ KQVKKSVFDE bmy_02925T0/1-649 QFEILKAQMF AERLAKRNRR AKRARAMPEE EPARGPAKKQ KQVKKSVFDE BACU011343/1-764 QFEILKAQMF AERLAKRNRR AKRARAMPEE EPARGPAKKQ KQVKKSVFDE ENSTTRP00000004033/1-792 QFEILKAQMF AERLAKRNRR AKRARAMPEE EPARGPAKKQ KQVKKSVFDE 751 800 ENSP00000360828/1-796 ELTNTSKKAL KQYRAGPSFE ERKQLGLPHQ RRGGNFKSKS RYKRRK ENSBTAP00000048220/1-765 ELTNTSKKAL KQYRAGPSFE ERKKLGLPHQ RRGGNFKSKS RYKRRK bmy_02925T0/1-649 ELTNTSKKAL KQYRAGPSFE ERKQLGLPHQ RRGGNFKSKS RYKRRK BACU011343/1-764 ELTNTSKKAL KQYRAGPSFE ERKQLGLPHQ RRGGNFKSKS RYKRRK ENSTTRP00000004033/1-792 ELTNTSKKAL KQYRAGPSFE ERKQLGLPHQ RRGGNFKSKS RYKRRK