KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:58:43 2014 Check: 00 .. Name: ENSTTRP00000000271/1-809 Len: 860 Check: 9511 Weight: 1.00 Name: bmy_02002T0/1-790 Len: 860 Check: 51 Weight: 1.00 Name: ENSP00000263980/1-815 Len: 860 Check: 2579 Weight: 1.00 Name: ENSBTAP00000048292/1-816 Len: 860 Check: 2574 Weight: 1.00 Name: BACU003239/1-859 Len: 860 Check: 1477 Weight: 1.00 // 1 50 ENSTTRP00000000271/1-809 MLLWSGVCGL SPPRIFPSLL VAVALVGLLP VLRSHGLQPS PTASTIRGSE bmy_02002T0/1-790 -MDASGTC-- ---------- ----LGGSSS SLTAGTLLPR FQGTCIRGA- ENSP00000263980/1-815 MVLRSGICGL SPHRIFPSLL VVVALVGLLP VLRSHGLQLS PTASTIRSSE ENSBTAP00000048292/1-816 MLLWPGASGL PPPRIFPSLL VVVALVGLLP VLRSYGLQIS PTASTIRGSE BACU003239/1-859 MLLWSGVCGL SPPRIFPSLL VAVALVGLLP VLRSHGLQPS PTASTIRGSE 51 100 ENSTTRP00000000271/1-809 PPRERSIGEV TTAPPELAPE SRPVNHSFTE HSLKSRKVFP VLGIDYTHVR bmy_02002T0/1-790 PAASTALKIC TQLP---LPP LRQLKMGRQD LLSARLLSWK WCGADWCLEL ENSP00000263980/1-815 PPRERSIGDV TTAPPEVTPE SRPVNHSVTD HGMKPRKAFP VLGIDYTHVR ENSBTAP00000048292/1-816 PPRERSIGDV TTAPPELAPE SRPVNHSFAE HSPKARKAFP VLGIDYQHVR BACU003239/1-859 PPRERSIGEV TTAPPELAPE SRPVNHSFTE HSLKSRKAFP VLGIDYTHVR 101 150 ENSTTRP00000000271/1-809 TPFEISLWIL LACLMKIG-- ---------- ---------- ---------- bmy_02002T0/1-790 LLLSPTPPIL SPS---AG-- ---------- ---------- ---------- ENSP00000263980/1-815 TPFEISLWIL LACLMKIG-- ---------- ---------- ---------- ENSBTAP00000048292/1-816 IPFEIALWIL LACLMKIG-- ---------- ---------- ---------- BACU003239/1-859 TPFEISLWIL LACLMKIGFC TPSQANTEPG CSAFYSIFAL KPGNEILSPG 151 200 ENSTTRP00000000271/1-809 ---------- --FHVIPTIS SIVPESCLLI VVGLLVGGLI KGVGETPPFL bmy_02002T0/1-790 ---------- --FHVIPTIS SIVPESCLLI VVGLLVGGLI KGVGETPPFL ENSP00000263980/1-815 ---------- --FHVIPTIS SIVPESCLLI VVGLLVGGLI KGVGETPPFL ENSBTAP00000048292/1-816 ---------- --FHVIPTIS SIVPESCLLI VVGLLVGGLI KGVGETPPIL BACU003239/1-859 ARAHRNLDAV PGFHVIPTIS SIVPESCLLI VVGLLVGGLI KGVGETPPFL 201 250 ENSTTRP00000000271/1-809 QSDVFFLFLL PPIILDAGYF LPLRQFTENL GTILIFAVVG TLWNAFFLGG bmy_02002T0/1-790 QSDVFFLFLL PPIILDAGYF LPLRQFTENL GTILIFAVVG TLWNAFFLGG ENSP00000263980/1-815 QSDVFFLFLL PPIILDAGYF LPLRQFTENL GTILIFAVVG TLWNAFFLGG ENSBTAP00000048292/1-816 QSEVFFLFLL PPIILDAGYF LPLRQFTENL GTILIFAVVG TLWNAFFLGG BACU003239/1-859 QSDVFFLFLL PPIILDAGYF LPLRQFTENL GTILIFAVVG TLWNAFFLGG 251 300 ENSTTRP00000000271/1-809 LMYAVCLVGG EQINNIGLLE NLLFGSIISA VDPVAVLAVF EEIHINELLH bmy_02002T0/1-790 LMYAVCLVGG EQINNIGLLE NLLFGSIISA VDPVAVLAVF EEIHINELLH ENSP00000263980/1-815 LMYAVCLVGG EQINNIGLLD NLLFGSIISA VDPVAVLAVF EEIHINELLH ENSBTAP00000048292/1-816 LMYAVCLVGG EQINNIGLLE NLLFGSIISA VDPVAVLAVF EEIHINELLH BACU003239/1-859 LMYAVCLVGG EQINNIGLLE NLLFGSIISA VDPVAVLAVF EEIHINELLH 301 350 ENSTTRP00000000271/1-809 ILVFGESLLN DAVTVVLYHL FEEFANYDRV GIVDIVLGFL SFFVVSLGGV bmy_02002T0/1-790 ILVFGESLLN DAVTVVLYHL FEEFANYDRV GIVDIVLGFL SFFVVSLGGV ENSP00000263980/1-815 ILVFGESLLN DAVTVVLYHL FEEFANYEHV GIVDIFLGFL SFFVVALGGV ENSBTAP00000048292/1-816 ILVFGESLLN DAVTVVLYHL FEEFANYDRV GIVDIILGFL SFFVVSLGGV BACU003239/1-859 ILVFGESLLN DAVTVVLYHL FEEFANYDRV GIVDIVLGFL SFFVVSLGGV 351 400 ENSTTRP00000000271/1-809 FVGVVYGVIA AFTSRFTSHI RVIEPLFVFL YSYMAYLSAE LFHLSGIMAL bmy_02002T0/1-790 FVGVVYGVIA AFTSRFTSHI RVIEPLFVFL YSYMAYLSAE LFHLSGIMAL ENSP00000263980/1-815 LVGVVYGVIA AFTSRFTSHI RVIEPLFVFL YSYMAYLSAE LFHLSGIMAL ENSBTAP00000048292/1-816 FVGVVYGVIA AFTSRFTSHI RVIEPLFVFL YSYMAYLSAE LFHLSGIMAL BACU003239/1-859 FVGVVYGVVA AFTSRFTSHI RVIEPLFVFL YSYMAYLSAE LFHLSGIMAL 401 450 ENSTTRP00000000271/1-809 IASGVVMRPY VEANISHKSH TTIKYFLKMW SSVSETLIFI FLGVSTVAGS bmy_02002T0/1-790 IASGVVMRPY VEANISHKSH TTIKYFLKMW SSVSETLIFI FLGVSTVAGS ENSP00000263980/1-815 IASGVVMRPY VEANISHKSH TTIKYFLKMW SSVSETLIFI FLGVSTVAGS ENSBTAP00000048292/1-816 IASGVVMRPY VEANISHKSH TTIKYFLKMW SSVSETLIFI FLGVSTVAGS BACU003239/1-859 IASGVLMRPY VEANISHKSH TTIKYFLKMW SSVSETLIFI FLGVSTVAGS 451 500 ENSTTRP00000000271/1-809 HHWNWTFVIS TLLFCLIARV LGVLGLTWFI NKFRIVKLTP KDQFIIAYGG bmy_02002T0/1-790 HHWNWTFVIS TLLFCLIARV LGVLGLTWFI NKFRIVKLTP KDQFIIAYGG ENSP00000263980/1-815 HHWNWTFVIS TLLFCLIARV LGVLGLTWFI NKFRIVKLTP KDQFIIAYGG ENSBTAP00000048292/1-816 HHWNWTFVIS TLLFCLIARV LGVLGLTWFI NKFRIVKLTP KDQFIIAYGG BACU003239/1-859 HHWNWTFVIS TLLFCLIARV LGVLGLTWFI NKFRIVKLTP KDQFIIAYGG 501 550 ENSTTRP00000000271/1-809 LRGAIAFSLG YLLDKKHFPM CDLFLTAIIT VIFFTVFVQG MTIRPLVDLL bmy_02002T0/1-790 LRGAIAFSLG YLLDKKHFPM CDLFLTAIIT VIFFTVF--G MTIRPLVDLL ENSP00000263980/1-815 LRGAIAFSLG YLLDKKHFPM CDLFLTAIIT VIFFTVFVQG MTIRPLVDLL ENSBTAP00000048292/1-816 LRGAIAFSLG YLLDKKHFPM CDLFLTAIIT VIFFTVFVQG MTIRPLVDLL BACU003239/1-859 LRGAIAFSLG YLLDKKHFPM CDLFLTAIIT VIFFTVFVQG MTIRPLVDLL 551 600 ENSTTRP00000000271/1-809 AVKKKQETKR SINEEIHTQX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX bmy_02002T0/1-790 AVKKKQETKR SINEEIHTQF LDHLLTGIED ICGHYGHHHW KDKLNRFNKK ENSP00000263980/1-815 AVKKKQETKR SINEEIHTQF LDHLLTGIED ICGHYGHHHW KDKLNRFNKK ENSBTAP00000048292/1-816 AVKKKQETKR SINEEIHTQF LDHLLTGIED ICGHYGHHHW KDKLNRFNKK BACU003239/1-859 AVKKKQETKR SINEEIHTQF LDHLLTGIED ICGHYGHHHW KDKLNRFNKK 601 650 ENSTTRP00000000271/1-809 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX bmy_02002T0/1-790 YVKKCLIAGE RSKEPQLIAF YHKMEMKQAI ELVESGGMGK IPSAVSTVSM ENSP00000263980/1-815 YVKKCLIAGE RSKEPQLIAF YHKMEMKQAI ELVESGGMGK IPSAVSTVSM ENSBTAP00000048292/1-816 YVKKCLIAGE RSKEPQLIAF YHKMEMKQAI ELVESGGMGK IPSAVSTVSM BACU003239/1-859 YVKKCLIAGE RSKEPQLIAF YHKMEMKQAI ELVESGGMGK IPSAVSTVSM 651 700 ENSTTRP00000000271/1-809 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXL RSYNRHTLVA bmy_02002T0/1-790 QNIHPKSLPA ERILPALSKD KEEEIRKILR NNLQKTRQRL RSYNRHTLVA ENSP00000263980/1-815 QNIHPKSLPS ERILPALSKD KEEEIRKILR NNLQKTRQRL RSYNRHTLVA ENSBTAP00000048292/1-816 QNIHPKSLPA ERILPALSKD KEEEIRKILR NNLQKTRQRL RSYNRHTLVA BACU003239/1-859 QNIHPKSLPA ERILPALSKD KEEEIRKILR NNLQKTRQRL RSYNRHTLVA 701 750 ENSTTRP00000000271/1-809 DPYEEAW-QM LLQRQKARQL EQKINNYLTV PAHKLDSPTM SRARIGSXXX bmy_02002T0/1-790 DPYEEAWNQM LLQRQKARQL EQKINNYLTV PAHKLDSPTM SRARIGSDPL ENSP00000263980/1-815 DPYEEAWNQM LLRRQKARQL EQKINNYLTV PAHKLDSPTM SRARIGSDPL ENSBTAP00000048292/1-816 DPYEEAWNQM LLRRQKARQL EQKISNYLTV PAHKLDSPTM SRARIGSDPL BACU003239/1-859 DPYEEAWNQM LLQRQKARQL EQKINNYLTV PAHKLDSPTM SRARIGSDPL 751 800 ENSTTRP00000000271/1-809 XXXXXXXXXX XXXXXXXXXX XXXXXXXXEE LKGKV-GLNR DPGRVKE--- bmy_02002T0/1-790 AYEPKADLPA ITIDPASPQS PESVDLVNEE LKGKVLGLSR DPGRVAEEDH ENSP00000263980/1-815 AYEPKEDLPV ITIDPASPQS PESVDLVNEE LKGKVLGLSR DPAKVAEEDE ENSBTAP00000048292/1-816 AYEPKADLPV ITIDPASPQS PESVDLVNEE LKGKVLGLSR DPGRLAEEEE BACU003239/1-859 AYEPKADLPA ITIDPASPQS PESVDLVNEE LKGKVLGLSR DPERVAEEDH 801 850 ENSTTRP00000000271/1-809 DHGDRGIMMR -QELSSPGTD DVFT-ASSDS PSSQRMQRCL SDPGPHPEPG bmy_02002T0/1-790 EDNDRGIMMR TKEPSSPGTD DVFSPAPSDS PSSQRIQRCL SDPGPHPEPG ENSP00000263980/1-815 DD-DGGIMMR SKETSSPGTD DVFTPAPSDS PSSQRIQRCL SDPGPHPEPG ENSBTAP00000048292/1-816 DQGPRWLTMR TKEPSSPGTD DVFTPAPSDS PSSQRIQRCL SDPGPHPEPG BACU003239/1-859 ED-DRGIVMR TKEPSSPGTD DVFSPAPSDS PSSQRIQRCL SDPGPHPEPG 851 900 ENSTTRP00000000271/1-809 EGEPFIPKGQ bmy_02002T0/1-790 EGEPFIPKGQ ENSP00000263980/1-815 EGEPFFPKGQ ENSBTAP00000048292/1-816 EGEPFIPKGQ BACU003239/1-859 EGEPFIPKGQ