KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:58:44 2014 Check: 00 .. Name: ENSTTRP00000013344/1-1043 Len: 1060 Check: 5247 Weight: 1.00 Name: ENSP00000299440/1-1043 Len: 1060 Check: 8568 Weight: 1.00 Name: ENSBTAP00000048319/1-1043 Len: 1060 Check: 8400 Weight: 1.00 Name: bmy_12112T0/1-1060 Len: 1060 Check: 871 Weight: 1.00 Name: BACU008911/1-1043 Len: 1060 Check: 6934 Weight: 1.00 // 1 50 ENSTTRP00000013344/1-1043 ---------- -------MAV SLPPTLGLSS APDELQHPHI KFSDWKFKLF ENSP00000299440/1-1043 ---------- -------MAA SFPPTLGLSS APDEIQHPHI KFSEWKFKLF ENSBTAP00000048319/1-1043 ---------- -------MAV SLPPTLGLSS APDEIQHPHI KFSEWKFKLF bmy_12112T0/1-1060 MLMREMYQAK EISTSASMAV SLPPTLGLSS APDEIQHPHI KFSEWKFKLF BACU008911/1-1043 ---------- -------MAV SLPPTLGLSS APDEIQHPHI KFSEWKFKLF 51 100 ENSTTRP00000013344/1-1043 RVRSFEKAPE NAQGEKQDSS EGKPSLEQSP AVLDTPGGQK SALTQLALKP ENSP00000299440/1-1043 RVRSFEKTPE EAQKEKKDSF EGKPSLEQSP AVLDKADGQK PVPTQPLLKA ENSBTAP00000048319/1-1043 RVRSFEKAPE NAQAEKQDSS EGKPSLEQSP AALDKVGGPK PALTQPVLKP bmy_12112T0/1-1060 RVRSFGKAPE NAQAEKQDSS ERKPSLEQSP AVLDKPGGQK PALTQPALKP BACU008911/1-1043 RVRSFEKAPE NAQAEKQDSS KGKSSLEQSP AVLDKAGGQK AALTQPALKP 101 150 ENSTTRP00000013344/1-1043 HPKFLKKSHD DRKARDKAMH QANLRHLCRI CGNPFKADGH NRRYPVHGPV ENSP00000299440/1-1043 HPKFSKKFHD NEKARGKAIH QANLRHLCRI CGNSFRADEH NRRYPVHGPV ENSBTAP00000048319/1-1043 HPKFQKKSHD DGKARDKAIH QANLRHLCRI CGNSLKADQH HRRYPVHGPV bmy_12112T0/1-1060 HPKFLKKSHD DRKARDKAMH QANLRHLCRI CGNPFKADGH NRRYPVHGPV BACU008911/1-1043 HPKFLKKSHD DRKARDKAMH QANLRHLCRI CGNPFKADGH NRRYPVHGPV 151 200 ENSTTRP00000013344/1-1043 DGKTQVLLRK KEKRATSWPD LIAKVFRIDV KADVDSIHPT EFCHNCWIFM ENSP00000299440/1-1043 DGKTLGLLRK KEKRATSWPD LIAKVFRIDV KADVDSIHPT EFCHNCWSIM ENSBTAP00000048319/1-1043 DGKTQVLLRK KEKRATSWPD LIAKVFRIDV KADVDSIHPT EFCHNCWSFM bmy_12112T0/1-1060 DGKTQVLLXK KEKRATSWPD LIAKVFXIDV KADVDSIHPT EFCHNCWSFM BACU008911/1-1043 DGKTQVLLRK KEKRATSWPD LIAKVFRIDV KADVDSIHPT EFCHNCWSFM 201 250 ENSTTRP00000013344/1-1043 HRRFSSAPCE AYSPRNATME WSSHTTPCDI CHIARQGLKR KGHQPSAQLS ENSP00000299440/1-1043 HRKFSSAPCE VYFPRNVTME WHPHTPSCDI CNTARRGLKR KSLQPNLQLS ENSBTAP00000048319/1-1043 HRKFSSAPRE VYSSRNATME WHPHTPSCDI CDAARRGLKR KSQPPNSQLS bmy_12112T0/1-1060 HRKFSSAPCE AYSPRNATME WSSHTTSCDI CHTARQGLKR KGHQPSAQLS BACU008911/1-1043 HRKFSSAPCE AYSPRNATME WSSHTTSCDI CHTARQGLKR KGHQPSAQLS 251 300 ENSTTRP00000013344/1-1043 KKLRTVIARA REVRRRKRRA QAGISSKELK KKIANCSKIH LSTQLLALDF ENSP00000299440/1-1043 KKLKTVLDQA RQARQHKRRA QARISSKDVM KKIANCSKIH LSTKLLAVDF ENSBTAP00000048319/1-1043 KRLRTVIDRA RQARRCKRRT QDRISSKELM KKTTNCSKIH LSTRLLAVDF bmy_12112T0/1-1060 KKLRTVIDRA REVRRRKRRA QARISNKELM KKIANCSKIH LSTQLLAVDF BACU008911/1-1043 KKLRTVIDRA REVRRRKRRA QARISNKELM KKIANCSKIH LSTQLLAVDF 301 350 ENSTTRP00000013344/1-1043 PAHFVKSVSC QVCEHILADP VETSCKHVFC RICILRCFKV MGNYCPSCRY ENSP00000299440/1-1043 PEHFVKSISC QICEHILADP VETNCKHVFC RVCILRCLKV MGSYCPSCRY ENSBTAP00000048319/1-1043 PAHFVKSISC QICEHILADP VETNCKHVFC RICILRCLKV LGSYCPSCQY bmy_12112T0/1-1060 PAHFVKSISC QICEHILXDP VETSCKHVFC RICILRCLKV MGSYCPSCRY BACU008911/1-1043 PARFVKSISC QICEHILADP VETSCKHVFC RICILRCLKV MGSYCPSCRY 351 400 ENSTTRP00000013344/1-1043 PCFPTDLESP VKSFLSILNS LMVKCPAKEC NEEVSLEKYN HHVSSHKESK ENSP00000299440/1-1043 PCFPTDLESP VKSFLSVLNS LMVKCPAKEC NEEVSLEKYN HHISSHKESK ENSBTAP00000048319/1-1043 PCFPTDLESP VKSFLSILNS LMVKCPAEEC DEEVSLEKYN HHVSSHKESK bmy_12112T0/1-1060 PCFPTDLESP VKSFLSILNT LMVKCPAKEC NEEVSLEKYN HHVSSHKESK BACU008911/1-1043 PCFPTDLESP VKSFLSILNT LMVKCPAKEC NEEVSLEKYN HHVSSHKESK 401 450 ENSTTRP00000013344/1-1043 ETFVHINKGG RPRQHLLSLT RRAQKHRLRE LKLQVKAFAD KEEGGDVKAV ENSP00000299440/1-1043 EIFVHINKGG RPRQHLLSLT RRAQKHRLRE LKLQVKAFAD KEEGGDVKSV ENSBTAP00000048319/1-1043 ETFVHINKGG RPRQHLLSLT RRAQKHRLRE LKMQVKAFAD KEEGGDVKSV bmy_12112T0/1-1060 ETFVHINKGG RPRQHLLSLT RRAQKHRLRE LKLQVKAFAD KEEGGDVKSV BACU008911/1-1043 ETFVHINKGG RPRQHLLSLT RRAQKHRLRE LKLQVKAFAD KEEGGDVKSV 451 500 ENSTTRP00000013344/1-1043 CLTLFLLALR ARNEHRQADE XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000299440/1-1043 CMTLFLLALR ARNEHRQADE LEAIMQGKGS GLQPAVCLAI RVNTFLSCSQ ENSBTAP00000048319/1-1043 CLTLFLLALR ARNEHRQADE LEAIMKGRGS GLQPAVCLAI RVNTFLSCSQ bmy_12112T0/1-1060 CLTLFLLALR ARNEHRQADE LEAIMQGRGS GLQPAVCLAI RVNTFLSCSQ BACU008911/1-1043 CLTLFLLALR ARNEHRQADE LEAIMQGRGS GLQPAVCLAI RVNTFLSCSQ 501 550 ENSTTRP00000013344/1-1043 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000299440/1-1043 YHKMYRTVKA ITGRQIFQPL HALRNAEKVL LPGYHHFEWQ PPLKNVSSST ENSBTAP00000048319/1-1043 YHKMYRTVKA ITGRQIFQPL HSLRSAEKVL LPGYHPFEWQ PPLKNVSSST bmy_12112T0/1-1060 YHKMYRTVKA ITGRQIFQPL HALRTAEKVL LPGYHPFEWQ PPLKXVSSST BACU008911/1-1043 YHKMYRTVKA ITGRQIFQPL HALRTAEKAL LPGYHPFEWQ PPLKNVSSST 551 600 ENSTTRP00000013344/1-1043 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000299440/1-1043 DVGIIDGLSG LSSSVDDYPV DTIAKRFRYD SALVSALMDM EEDILEGMRS ENSBTAP00000048319/1-1043 DVGIIDGLSG LASSVDDYPV DTIAKRFRYD AALVSALMDM EEDILEGMRA bmy_12112T0/1-1060 DVGIIDGLSG LSSSVDDYPV DTIAKRFRYD SALVSALMDM EEDILXGMRD BACU008911/1-1043 DVGIIDGLSG LSSSVDDYPV DTIAKRFRYD SALVSALMDM EEDILAGMRD 601 650 ENSTTRP00000013344/1-1043 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXIMKII ENSP00000299440/1-1043 QDLDDYLNGP FTVVVKESCD GMGDVSEKHG SGPVVPEKAV RFSFTIMKIT ENSBTAP00000048319/1-1043 RELDDYLNGP FTVVVKESCD GMGDVSEKHG SGPAVPEKAV RFSFTVMKIS bmy_12112T0/1-1060 QDFDDYLNGP FTVVVKESCD GMGDVGEKHG SGPAVPEKAV RFSFTIMKIT BACU008911/1-1043 QDLDDYLNGP FTVVVKESCD GMGDVGEKHG SGPAVPEKAV RFSFTIMKIT 651 700 ENSTTRP00000013344/1-1043 IAHGSQNVNV CVKAKLNSAL CCKPLCVMLA DESDHETLTA ILSPLIAERE ENSP00000299440/1-1043 IAHSSQNVKV FEEAKPNSEL CCKPLCLMLA DESDHETLTA ILSPLIAERE ENSBTAP00000048319/1-1043 VAHGSQNVKV FEEAKPNSEL CCKPLCLMLA DESDHETLTA ILSPLIAERE bmy_12112T0/1-1060 IAHGSQNVKV FEEAKPNSEL CCKPLCLMLA DESDHETLTA ILSPLIAERE BACU008911/1-1043 IAHGSQNVKV FEEAKPNSEL CCKPLCLMLA DESDHETLTA ILSPLIAERE 701 750 ENSTTRP00000013344/1-1043 AMKSSRLMLE MGGILRTFKF IFRGTGYDEK LVREVEGLEA SGSVYICTLC ENSP00000299440/1-1043 AMKSSELMLE LGGILRTFKF IFRGTGYDEK LVREVEGLEA SGSVYICTLC ENSBTAP00000048319/1-1043 AMKSSELMLE MGGILRTFKF IFRGTGYDEK LVREVEGLEA SGSVYICTLC bmy_12112T0/1-1060 AMKSSKLMLE MGGILRTFKF IFRGTGYDEK LVREVEGLEA SGSVYICTLC BACU008911/1-1043 AMKSSKLMLE MGGILRTFKF IFRGTGYDEK LVREVEGLEA SGSVYICTLC 751 800 ENSTTRP00000013344/1-1043 DATRLEASQN LVFHSITRSH VDNLERYEVW RSNPYHETVE ELRDRVKGVS ENSP00000299440/1-1043 DATRLEASQN LVFHSITRSH AENLERYEVW RSNPYHESVE ELRDRVKGVS ENSBTAP00000048319/1-1043 DATRLEASQN LVFHSITRSH AENLERYEVW RSNPYHETVE ELRDRVKGVS bmy_12112T0/1-1060 DATRLEASQN LVFHSITRSH VDNLERYEVW RSNPYHETVE ELRDRVKGVS BACU008911/1-1043 DATRLEASQN LVFHSITRSH VDNLERYEVW RSNPYHETVE ELRDRVKGVS 801 850 ENSTTRP00000013344/1-1043 AKPFIETVPS IDALHCDIGN AAEFYKIFQL EIGEVYKNPS ASKEERKRWQ ENSP00000299440/1-1043 AKPFIETVPS IDALHCDIGN AAEFYKIFQL EIGEVYKNPN ASKEERKRWQ ENSBTAP00000048319/1-1043 AKPFIETVPS IDALHCDIGN AAEFYKIFQL EIGEVYKNPN ASKEERKRWQ bmy_12112T0/1-1060 AKPFIETVPS IDALHCDIGN AAEFYKIFQL EIGEVYKNPS ASKEERKRWQ BACU008911/1-1043 AKPFIETVPS IDALHCDIGN AAEFYKIFQL EIGEVYKNPS ASKEERKRWQ 851 900 ENSTTRP00000013344/1-1043 AALDKHLRKK MNLKPIMRMN GNFARKLMTK ETVEAVCELI PSEERHEALR ENSP00000299440/1-1043 ATLDKHLRKK MNLKPIMRMN GNFARKLMTK ETVDAVCELI PSEERHEALR ENSBTAP00000048319/1-1043 ATLDKHLRKK MNLKPIMRMN GNFARKLMTK ETVEAVCELI PSQERHEALK bmy_12112T0/1-1060 AALDKHLRKK MNLKPIMRMN GNFARKLMTK ETVEAVCELI PSEERHEALR BACU008911/1-1043 AALDKHLRKK MNLKPIMRMN GNFARKLMTK ETVEAVCELI PSKERHEALR 901 950 ENSTTRP00000013344/1-1043 ELMDLYLKMK PVWRSSCPAK ECPESLCQYS FNSQRFAELL STKFKYRYEG ENSP00000299440/1-1043 ELMDLYLKMK PVWRSSCPAK ECPESLCQYS FNSQRFAELL STKFKYRYEG ENSBTAP00000048319/1-1043 ELMDLYLKMK PVWRSSCPAK ECPESLCQYS FNSQRFAELL STKFKYRYEG bmy_12112T0/1-1060 ELMDLYLKMK PVWRSSCPAK ECPESLCQYS FNSQRFAELL STKFKYRYEG BACU008911/1-1043 ELMDLYLKMK PVWRSSCPAK ECPESLCQYS FNSQRFAELL STKFKYRYEG 951 1000 ENSTTRP00000013344/1-1043 KITNYFHKTL AHVPEIIERD GSIGAWASEG NESGNKLFRR FRKMNARQSK ENSP00000299440/1-1043 KITNYFHKTL AHVPEIIERD GSIGAWASEG NESGNKLFRR FRKMNARQSK ENSBTAP00000048319/1-1043 KITNYFHKTL AHVPEIIERD GSIGAWASEG NESGNKLFRR FRKMNARQSK bmy_12112T0/1-1060 KITNYFHKTL AHVPEIIERD GSIGAWASEG NESGNKLFRR FRKMNARQSK BACU008911/1-1043 KITNYFHKTL AHVPEIIERD GSIGAWASEG NESGNKLFRR FRKMNARQSK 1001 1050 ENSTTRP00000013344/1-1043 CYEMEDVLKH HWLYTSKYLQ KFMNAHNALK TSGFTINSQG SLGDSLDLED ENSP00000299440/1-1043 CYEMEDVLKH HWLYTSKYLQ KFMNAHNALK TSGFTMNPQA SLGDPLGIED ENSBTAP00000048319/1-1043 YYEMEDVLKH HWLYTSKYLQ KFMNAHNALK DSGFTLNSQG GLGDLLDLEE bmy_12112T0/1-1060 YYEMEDVLKH HWLYTSKYLQ KFMNAHNALK TSGFTINSQG SLGDSLDLED BACU008911/1-1043 YYEMEDVLKH HWLYTSKYLQ KFMNAHNALK TSGFTINSQG SLGDSLNLEN 1051 1100 ENSTTRP00000013344/1-1043 SPESQNSMEF ENSP00000299440/1-1043 SLESQDSMEF ENSBTAP00000048319/1-1043 SPESQDSMEF bmy_12112T0/1-1060 SPEPQDSMEF BACU008911/1-1043 SPEPQDSMEF