KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:58:51 2014 Check: 00 .. Name: ENSP00000287590/1-401 Len: 503 Check: 5843 Weight: 1.00 Name: ENSBTAP00000048335/1-413 Len: 503 Check: 6355 Weight: 1.00 Name: BACU020408/1-421 Len: 503 Check: 3073 Weight: 1.00 Name: bmy_04905T0/1-478 Len: 503 Check: 565 Weight: 1.00 Name: ENSTTRP00000015259/1-397 Len: 503 Check: 86 Weight: 1.00 // 1 50 ENSP00000287590/1-401 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000048335/1-413 ---------- ---------- ---------- ---------- ---------- BACU020408/1-421 ---------- ---------- ---------- ---------- ---------- bmy_04905T0/1-478 MPGCARRLDR PVGDRGPRGP CAQPSPAAPL LPYARAPRHA HPTPAPGELA ENSTTRP00000015259/1-397 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000287590/1-401 ---------- ---------- -------MSL WKKTVYRSLC LALALLVAVT ENSBTAP00000048335/1-413 ---------- -----FLSSE LSTPHLTPTP RKRTVYKSVC LSLALLVAVT BACU020408/1-421 ---------- ---------- ---------- -KRTIYKSVC LSLALLVAVT bmy_04905T0/1-478 TQGLAGSWDP SPIPRASCVL GDPRPLPSTP EKRTIYKSVC LSLALLVAVT ENSTTRP00000015259/1-397 ---------- ---------- ---------- -KRTIYKSVC LSLALLVAVT 101 150 ENSP00000287590/1-401 VFQRSLTPGQ FLQEPPPPTL EPQKAQKPNG QLVNPNNFWK NPKDVAAPTP ENSBTAP00000048335/1-413 VFQRSLTPSQ FLQEPPPASL RQQKAQKPSG LLVNPDSFWK SAKEVVTPTP BACU020408/1-421 VFQRSLTPSQ FLQEPLLPTL GLQKAQKPSG HLVNPDSFWK NPKDAVTLTP bmy_04905T0/1-478 VFQRSLTPSQ FLQEPLLPTL GLQKAQKPSG HLVNPDSFWK NPKDAVTLTP ENSTTRP00000015259/1-397 VFQRSLTPSQ FLQEPLLPTL GLQKAQKPSG HLVNPDSFWK NPKDAVTLTP 151 200 ENSP00000287590/1-401 MASQGPQAWD VTTTNCSANI NLTHQPWFQV LEPQFRQFLF YRHCRYFPML ENSBTAP00000048335/1-413 VVSRRPQAWD VNTTNCSANV NLTHQSWFQG LEPHFQQFLL YRHCRYFPML BACU020408/1-421 MVSRGPQAWD VTTTNCSANV NLTHQPWFQG LEPHLHQFLF YRHCRYFPM- bmy_04905T0/1-478 MVSRGPQAWD VTTTNCSANV NLTHQPWFQG LEPHFQQFLF YRHCRYFPML ENSTTRP00000015259/1-397 MVSRGPQAWD VTTTNCSANV NLTHQPWFQG LEPHFQQFLF YRHCRYFPML 201 250 ENSP00000287590/1-401 LNHPEKCRGD VYLLVVVKSV ITQHDRREAI RQTWGRERQS AGGGRGAVRT ENSBTAP00000048335/1-413 LNHPEKCSGD VYLLVVVKSI IAQHDRREAI RQTWGREQES AGRGRGAVRT BACU020408/1-421 LNHPEKCSGD VYLLVVVKSV ITQHDRREAI RQTWGREQES AGRGRGAVHT bmy_04905T0/1-478 LNHPEKCSGD VYLLVVVKSV ITQHDRREAI RQTWGREQES AGRGRGAVHT ENSTTRP00000015259/1-397 LNHPEKCSGD VYLLVVVKSV ITQHDRREAI RQTWGREQES AGRGRGAVHT 251 300 ENSP00000287590/1-401 LFLLGTASKQ EERTHYQQLL AYEDRLYGDI LQWGFLDTFF NLTLKEIHFL ENSBTAP00000048335/1-413 LFLLGKASKP EEQSHYQQLL AYEDRIYGDI LQWDFLDSFF NLTLKEIHFL BACU020408/1-421 LFLLGTASKQ EERAHYQQLL AYEDRIYGDI LQWDFLDSFF NLTLKEIHFL bmy_04905T0/1-478 LFLLGTASKQ EERAHYQQLL AYEDRIYGDI LQWDFLDSFF NLTLKEIHFL ENSTTRP00000015259/1-397 LFLLGTASKQ EERAHYQQLL AYEDRIYGDI LQWDFLDSFF NLTLKEIHFL 301 350 ENSP00000287590/1-401 KWLDIYCPHV PFIFKGDDDV FVNPTNLLEF LADRQPQENL FVGDVLQHAR ENSBTAP00000048335/1-413 KWLDIYCPDV RFVFKGDDDV FVNPTNLLEF LADRRPQEDL FVGDILHHAR BACU020408/1-421 KWLDIYCPHV HFIFKGDDDV FVNPTNLLEF LADRRPQEDL FVGDVLQHAR bmy_04905T0/1-478 KWLDIYCPHV HFIFKGDDDV FVNPTNLLEF LADRRPQEDL FVGDVLQHAR ENSTTRP00000015259/1-397 KWLDIYCPDV RFIFKGDDDV FVNPTNLLEF LADRRPQEDL FVGDVLQHAR 351 400 ENSP00000287590/1-401 PIRRKDNKYY IPGALYGKAS YP-------- ---------- -------PYA ENSBTAP00000048335/1-413 PIRRKDSKYY IPGILYNQNS YP-------- ---------- -------PYA BACU020408/1-421 PIRRKDNKYY IPGALYSQAS YPPYAGGGGF LMAGGGGPGP PHPLGPPPYA bmy_04905T0/1-478 PIRRKDNKYY IPGALYSQAS YP-------- ---------- -------AYA ENSTTRP00000015259/1-397 PIRRKDNKYY IPGALYSQAS YP-------- ---------- -------PYA 401 450 ENSP00000287590/1-401 GGGGFLMAGS LARRLHHACD TLELYPIDDV FLGMCLEVLG VQPTAHEGFK ENSBTAP00000048335/1-413 GGGGFLMAGG LAQRLHHSCD TLELYPIDDV FLGMCLEVLG VRPMAHEGFK BACU020408/1-421 GGGGFLMAGG LARRLHHACD TLELYPIDDV FLGMCLEVLG VRPTAHEGFK bmy_04905T0/1-478 GGGGFLMAGG LARRLHHACD TLELYPIDDV FLGMCLEVLG VRPTAHEGFK ENSTTRP00000015259/1-397 GGGGFLMAGG LARRLHHACD TLELYPIDDV FLGMCLEVLG VRPTAHEGFK 451 500 ENSP00000287590/1-401 TFGISRNRNS RMNKEPCFFR AMLVVHKLLP PELLAMWGLV HSNLTCSRKL ENSBTAP00000048335/1-413 TFGISRNRNS RMNKEPCFFR SMLVVHKLLP TELLAMWELV HGNLTCSRKL BACU020408/1-421 TFGISRNRNS RMNKEPCFFR SMLVVHKLLP TELLAMWGLV HGNLTCSRKL bmy_04905T0/1-478 TFGISRNRNS RMNKEPCFFR SMLVVHKLLP TELLAMWGLV HGNLTCSRKL ENSTTRP00000015259/1-397 TFGISRNRNS RMNKEPCFFR SMLVVHKLLP TELLAMWGLV HGNLTCSRKL 501 550 ENSP00000287590/1-401 QVL ENSBTAP00000048335/1-413 QVL BACU020408/1-421 QVL bmy_04905T0/1-478 RVL ENSTTRP00000015259/1-397 QVL