KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:58:56 2014 Check: 00 .. Name: ENSP00000347755/1-457 Len: 493 Check: 7805 Weight: 1.00 Name: ENSBTAP00000048405/1-460 Len: 493 Check: 7152 Weight: 1.00 Name: ENSTTRP00000004099/1-455 Len: 493 Check: 3271 Weight: 1.00 Name: bmy_14786T0/1-230 Len: 493 Check: 6989 Weight: 1.00 Name: BACU009008/1-434 Len: 493 Check: 2157 Weight: 1.00 // 1 50 ENSP00000347755/1-457 ---------- ---------- ------MSQG SVTFRDVAID FSQEEWKWLQ ENSBTAP00000048405/1-460 ---------- ---------- -----MSFQE SVTFRDVSID FSREEWEWLQ ENSTTRP00000004099/1-455 ---------- ---------- ---------G SVTFRDVAVD FSREEWEWLQ bmy_14786T0/1-230 MSQWDSFHSL IRAFGSMGAG CADVCVSFQG SVTFRDVAVD FSREEWEWLQ BACU009008/1-434 ---------- ---------- ------MSQG SVTFRDVAVD FSREEWEWLQ 51 100 ENSP00000347755/1-457 PAQRDLYRCV MLENYGHLVS L-GLSISKPD VVSLLEQGKE PWLGKREVKR ENSBTAP00000048405/1-460 PAQRDLYRHV MLENYGHLVS LAGLNMSKPD VVSLLEQGKE PWLGNGDVSR ENSTTRP00000004099/1-455 PAQRDLYRHV MLENYGHLVS L-GLNISKPH VVSLLEQGKE PWLGK-DASR bmy_14786T0/1-230 PAQRDLYRHV MLENYGHLVS L-GLNISKPD VVSLLEQGKE PWLGK-DASR BACU009008/1-434 PAQRDLYRHV MLENYGHLVS L--------- ---------- ---------- 101 150 ENSP00000347755/1-457 DLFSVSESSG EIKDFSPKNV IY-DDSSQYL IMERILSQGP VYSSFKGGWK ENSBTAP00000048405/1-460 ELFPASKSNG EIKEFSPKNV IFEDDSSQYL IMERFLSQGS EYSSFKEGWK ENSTTRP00000004099/1-455 GLFSASESNG EIKEFSPKNV IYEDDSSQYL IIERFLSQGL EYSNFKEGWK bmy_14786T0/1-230 GLFSASESNG EIKEFSPKNV IYEDDSSQYL IMERFLSQGL EYSSFKEGWK BACU009008/1-434 ----ASESNG EIKEFSPKNV IYEDDSSQYL IMERFLSQGL EYSSFKEGWK 151 200 ENSP00000347755/1-457 CKDHTEMLQE NQGCIRKVTV SHQEALAQHM NISTVERPYG CHECGKTFGR ENSBTAP00000048405/1-460 CEGDTEMLQG NQGCIRQVTA SHQEALSQHV NVSAVERPYG CHECGKTFSR ENSTTRP00000004099/1-455 CEGDTEMLQG NQGYVRQVTV SHQEALSQHM NVSTVERPYG CHECGKTFSR bmy_14786T0/1-230 CEGDTEMLQG NQGYIRQVTV SHQEALSQHT NVSTVERPYG CHECGKTFSR BACU009008/1-434 CEGDTEMLQG NQGYIRQVTV SHQEALSQHM NVSTVERPYG CHECGKTFSR 201 250 ENSP00000347755/1-457 RFSLVLHQRT HTGEKPYACK ECGKTFSQIS NLVKHQMIHT GKKPHECKDC ENSBTAP00000048405/1-460 RFSLVLHQRT HTGEKPYVCK ECGKTFSQIS NLVKHQMIHT GKKPHECKDC ENSTTRP00000004099/1-455 RFSLVLHQRT HTGEKPYVCK ECGKTFSQIS NLVKHQMIHT GKKPHECKDC bmy_14786T0/1-230 RFSLVLHQRT HTGEKPYVCK ECGKTFSQIS NL-------- ---------- BACU009008/1-434 RFSLVLHQRT HTGEKPYVCK ECGKTFSQIS NLVKHQMIHT GKKPHECKDC 251 300 ENSP00000347755/1-457 NKTFSYLSFL IEHQRTHTGE KPYECTECGK AFSRASNLTR HQRIHIGKKQ ENSBTAP00000048405/1-460 NKTFSYLSFL IEHQRTHTGE KPYECTECGK AFSRASNLTR HQRIHIGKKQ ENSTTRP00000004099/1-455 NKTFSYLSFL IEHQRTHTGE KPYECTECGK AFSRASNLTR HQRIHIGKKQ bmy_14786T0/1-230 ---------- ---------- ---------- ---------- ---------- BACU009008/1-434 NKTFSYLSFL IEHQRTHTGE KPYECTECGK AFSRASNLTR HQRIHIGKKQ 301 350 ENSP00000347755/1-457 YICRKCGKAF SSGSELIRHQ ITHTGEKPYE CIECGKAFRR FSHLTRHQSI ENSBTAP00000048405/1-460 YVCRKCGKAF SSGSELIRHQ ITHTGEKPYE CIECGKAFRR SSHLTRHQSV ENSTTRP00000004099/1-455 YVCRRCGKAF SSGSELIRHQ ITHTGEKPYE CIECGKAFRR SSHLSRHQSV bmy_14786T0/1-230 ---------- ---------- ---------- ---------- ---------- BACU009008/1-434 YVCRRCGKAF SSGSELIRHQ ITHTGEKPYE CVECGKAFRR SSHLTRHQSV 351 400 ENSP00000347755/1-457 HTTKTPYECN ECRKAFRCHS FLIKHQRIHA GEKLYECDEC GKVFTWHASL ENSBTAP00000048405/1-460 HTSKTPYECN ECSKAFRCHS FLIKHQRIHA GEKLYECDEC GKVFTWHASL ENSTTRP00000004099/1-455 HTSKTPYECN ECSKAFRCHS FLIKHQRIHA GEKLYECDEC GKVFTWHASL bmy_14786T0/1-230 ---------- ---------- ---------- ---------- ---------- BACU009008/1-434 HTSKTPYECN ECSKAFRCHS FLIKHQRIHA GEKLYECDEC GKVFTWHASL 401 450 ENSP00000347755/1-457 IQHTKSHTGE KPYACAECDK AFSRSFSLIL HQRTHTGEKP YVCKVCNKSF ENSBTAP00000048405/1-460 AQHMKIHTGE KPYACTECDK TFSRSFSLIL HQITHTGEKP YVCKVCNKSF ENSTTRP00000004099/1-455 VQHMRIHTGE KPYACTECDK TFSRSFSLIL HQITHTGEKP YVCKVCNKSF bmy_14786T0/1-230 ---------- ---------- ---------- ---------- ---------- BACU009008/1-434 AQHMKIHTGE KPYACTECDK TFSRSFSLIL HQITHTGEKP YVCKVCNKSF 451 500 ENSP00000347755/1-457 SWSSNLAKHQ RTHTLDNPYE YENSFNYHSF LTEHQ----- --- ENSBTAP00000048405/1-460 SWSSNLAKHE RTHTLENPYE YENSFNYHSF LTEHQ----- --- ENSTTRP00000004099/1-455 SWSSNLTKHQ RTHTLENTYE YENSFNYHSF LAEHQG---- --- bmy_14786T0/1-230 ---------- ---------- ---------- ---------- --- BACU009008/1-434 SWSSNLAKHQ RTHTLENPYE YENSFNYHSF LAEHQGIHTV EKT