KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:58:57 2014 Check: 00 .. Name: ENSTTRP00000016338/1-450 Len: 469 Check: 2999 Weight: 1.00 Name: ENSP00000380824/1-454 Len: 469 Check: 8807 Weight: 1.00 Name: ENSBTAP00000048430/1-452 Len: 469 Check: 8670 Weight: 1.00 Name: bmy_17704T0/1-463 Len: 469 Check: 9816 Weight: 1.00 Name: BACU012331/1-454 Len: 469 Check: 573 Weight: 1.00 // 1 50 ENSTTRP00000016338/1-450 ---------- -LFQSHMATK TAHMSTQVFD NEEK-KKENP RSLAMSGHVG ENSP00000380824/1-454 MASSEVARHL -LFQSHMATK TTCMSSQGSD DEQI-KRENI RSLTMSGHVG ENSBTAP00000048430/1-452 --VSCVDYHM -LFQSHITTK TAHTSSQVSD HEQK-QKDSP RSLTMSGHVG bmy_17704T0/1-463 --MSDLSKTT ELFQSHMATK TAHMSPQVFD NEEKQKKENT RSLAMSGHVG BACU012331/1-454 --MSDLSKTT ELFQSHMATK TAHMSPQVFD NDEKQKKENT RSLAMSGHVG 51 100 ENSTTRP00000016338/1-450 FESLPDQLVN RSIQQGFCFN ILCVXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000380824/1-454 FESLPDQLVN RSIQQGFCFN ILCVGETGIG KSTLIDTLFN TNFEDYESSH ENSBTAP00000048430/1-452 FESLPDQLVN RSIQQGFCFN ILCVGETGIG KSTLIDTLFN TNFEDHESSH bmy_17704T0/1-463 FESLPDQLVN RSIQQGFCFN ILCVGETGIG KSTLIDTLFN TNFEDHESSH BACU012331/1-454 FESLPDQLVN RSIQQGFCFN ILCVGETGIG KSTLIDTLFN TNFEDHESSH 101 150 ENSTTRP00000016338/1-450 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX YQPIVDYIDA ENSP00000380824/1-454 FCPNVKLKAQ TYELQESNVQ LKLTIVNTVG FGDQINKEES YQPIVDYIDA ENSBTAP00000048430/1-452 FYPHVRLKAQ TYELQESNVR LKLTIVNTVG FGDQINKEES YQPIVDYIDA bmy_17704T0/1-463 FYPHVRLKAQ TYELQESNVR LKLTIVNTVG FGDQINKEES YQPIVDYIDA BACU012331/1-454 FYPHVRLKAQ TYELQESNVR LKLTIVNTVG FGDQINKEES YQPIVDYIDA 151 200 ENSTTRP00000016338/1-450 QFEAYLQEEL KIKRSLFNYH DSRIHVCLYF ISPTGHSLKT LDLLTMKSLD ENSP00000380824/1-454 QFEAYLQEEL KIKRSLFTYH DSRIHVCLYF ISPTGHSLKT LDLLTMKNLD ENSBTAP00000048430/1-452 QFEAYLQEEL KIKRSLFNYH DSRVHVCLYF ISPTGHSLKT LDLLTMKSLD bmy_17704T0/1-463 QFEAYLQEEL KIKRSLFNYH DSRIHVCLYF ISPTGHSLKT LDLLTMKSLD BACU012331/1-454 QFEAYLQEEL KIKRSLFNYH DSRIHVCLYF ISPTGHSLKT LDLLTMKSLD 201 250 ENSTTRP00000016338/1-450 SKVNIIPVIA KADAISKTEL QKFKIKLMSE LVSNGVQIYQ FPTDDETIAK ENSP00000380824/1-454 SKVNIIPVIA KADTVSKTEL QKFKIKLMSE LVSNGVQIYQ FPTDDDTIAK ENSBTAP00000048430/1-452 SKVNIIPVIA KADAISKTEL QKFKIKLMSE LVSNGVQIYQ FPTDDETIAK bmy_17704T0/1-463 SKVNIIPVIA KADAISKTEL QKFKIKLMSE LVSNGVQIYQ FPTDDETIAK BACU012331/1-454 SKVNIIPVIA KADAISKTEL QKFKIKIMSE LVSNGVQIYQ FPTDDETIAK 251 300 ENSTTRP00000016338/1-450 VNASMNXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXE NENHCDFVKL ENSP00000380824/1-454 VNAAMNGQLP FAVVGSMDEV KVGNKMVKAR QYPWGVVQVE NENHCDFVKL ENSBTAP00000048430/1-452 INASMNGHLP FAVVGSMDEV KVGNKMVKAR QYPWGVVQVE NENHCDFVKL bmy_17704T0/1-463 INASMNGHLP FAVVGSMDEV KVGNKMVKAR QYPWGIVQVE NENHCDFVKL BACU012331/1-454 INASMNGHLP FAVVGSMDEV KVGNKMVKAR QYPWGIVQVE NENHCDFVKL 301 350 ENSTTRP00000016338/1-450 REMLICTNME DLRDETHTRH YELYRRRKLE EMGLTDTGPE NKPLSLQETY ENSP00000380824/1-454 REMLICTNME DLREQTHTRH YELYRRCKLE EMGFTDVGPE NKPVSVQETY ENSBTAP00000048430/1-452 REMLICTNME DLRDQTHTRH YELYRRRKLE EMGFMDVGPE NQPLSLQETY bmy_17704T0/1-463 REMLICTNME DLRDETHTRH YELYRRRKLE EMGLTDMGPE NKPLSLQETY BACU012331/1-454 REMLICTNME DLRDETHTRH YELYRRRKLE EMGLTDMGPE NKPLSLQETY 351 400 ENSTTRP00000016338/1-450 EAKRHEFYGE RQRKEEEMKQ LFVQRVKEKE AVLKEAERE- ------XXXX ENSP00000380824/1-454 EAKRHEFHGE RQRKEEEMKQ MFVQRVKEKE AILKEAERE- ---------- ENSBTAP00000048430/1-452 EAKRHEFYGE RQRKEEEMKQ LFVQRVKEKE AILKEAERE- ---------- bmy_17704T0/1-463 EAKRHEFYGE RQRKEEEMKQ LFVQRVKEKE AVLKEAEREA TRPQREPHFT BACU012331/1-454 EAKRHEFYGE RQRKEEEMKQ LFVQRVKEKE AVLKEAERE- --------AS 401 450 ENSTTRP00000016338/1-450 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000380824/1-454 --LQAKFEHL KRLHQEERMK LEEKRRLLEE EIIAFSKKKA TSEIFHSQSF ENSBTAP00000048430/1-452 --LQAKFEHL KRVHQEEKLR LEEKRRLLEE EIMAFSKKKA TSEIYQNQTF bmy_17704T0/1-463 SQLQAKFEHL KRVHQEEKLR LEEKRRLLEE EIIAFSKKKA TSEIYQNQPF BACU012331/1-454 TLLQAKFEHL KRVHQEEKLR LEEKRRLLEE EIIAFSKKKA TSEIYQNQPF 451 500 ENSTTRP00000016338/1-450 XXXXXXXXXP VLCKTGSSS ENSP00000380824/1-454 LATGSNLRKD KDRKNSNFL ENSBTAP00000048430/1-452 MTPGSNLRKD KDRKNSNFM bmy_17704T0/1-463 MTPGGNVRKD KDRKK---- BACU012331/1-454 MTPGGNVRKD KDRKK----