KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:59:13 2014 Check: 00 .. Name: ENSTTRP00000016255/1-488 Len: 503 Check: 1090 Weight: 1.00 Name: ENSP00000355374/1-477 Len: 503 Check: 1798 Weight: 1.00 Name: ENSBTAP00000048496/1-478 Len: 503 Check: 6406 Weight: 1.00 Name: bmy_22319T0/1-498 Len: 503 Check: 8586 Weight: 1.00 Name: BACU009710/1-478 Len: 503 Check: 3127 Weight: 1.00 // 1 50 ENSTTRP00000016255/1-488 ---------- -----LLPAP SPPPAMSNGW KDHLGARSSE PLPVVIIGNG ENSP00000355374/1-477 ---------- ---------- -----MSSSR KDHLGASSSE PLPVIIVGNG ENSBTAP00000048496/1-478 ---------- ---------- -----MSNQR KDHLGASSSE PLRVIIIGNG bmy_22319T0/1-498 MTPRLTSSPV PPGCCQPRAP PRATAMSNGW KDHLGASGSE PLPVVIIGNG BACU009710/1-478 ---------- ---------- -----MSNGW KDHLGASGSE PLPVVIIGNG 51 100 ENSTTRP00000016255/1-488 PSGICLSYLL SGYNPYVKPD AIHPHPLLQR KLTEAPGVSI VDQXXXXXXX ENSP00000355374/1-477 PSGICLSYLL SGYTPYTKPD AIHPHPLLQR KLTEAPGVSI LDQDLDYLSE ENSBTAP00000048496/1-478 PSGICLSYLL SGYTPYVRPD AIHPHPLLQR KLSEAPGVSI MDQDLDYLSE bmy_22319T0/1-498 PSGICLSYLL SGYNPYVKPD AIHPHPVLQR KLTEAPGVSI VDQDLDYLSE BACU009710/1-478 PSGICLSYLL SGYSPYVKPD AIHPHPMLQR KLTEAPGVSI VDQDLDYLSE 101 150 ENSTTRP00000016255/1-488 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000355374/1-477 GLEGRSQSPV ALLFDALLRP DTDFGGNMKS VLTWKHRKEH AIPHVVLGRN ENSBTAP00000048496/1-478 GLEGRCQSPV ALLFDALLRP DTDFGGSVES VLTWRHQKER AIPHLVLGRN bmy_22319T0/1-498 GLEGRCQSPV ALLFDALLRP DTDFGGNVES VLTWKHQKER AIPHLVLGRN BACU009710/1-478 GLEGRCQSPV ALLFDALLRP DTDFGGNVES VLTWKHQKER AIPHLVLGRN 151 200 ENSTTRP00000016255/1-488 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXGL RNSRATAGDI ENSP00000355374/1-477 LPGGAWHSIE GSMVILSQGQ WMGLPDLEVK DWMQKKRRGL RNSRATAGDI ENSBTAP00000048496/1-478 PPGGAWHSIE GSMVTLSQGE WMGLPDLQVK DWMCKKRRGL RNSRATAGDI bmy_22319T0/1-498 LPGGAWHSIE GSMVTLSQGD WMGLPDLQVK DWMCRKR--- --SRATAGDI BACU009710/1-478 LPGGAWHSIE GSMVTLSQGD WMGLPDLQVK DWMCRKRRGL RNSRATAGDM 201 250 ENSTTRP00000016255/1-488 AHYYRDYVIK KGLSHNFVSG AVVTAVEWGT PEPSSPGAQD PSPLFQVNGF ENSP00000355374/1-477 AHYYRDYVVK KGLGHNFVSG AVVTAVEWGT PDPSSCGAQD SSPLFQVSGF ENSBTAP00000048496/1-478 AHYYRDYVIR KGLSHNFVSS ATVTAVEWGT PEPSSPGARD PSPLFQVSGF bmy_22319T0/1-498 AHYYSDYVIK KGLSHNFVSG AVVTAVERGT PEPSGPGTRD PSPLFQVNGF BACU009710/1-478 AHYYSDYVIK KGLSHNFVSG AVVTAVERGT PEPSGPGARD PSPLFQVNGF 251 300 ENSTTRP00000016255/1-488 VTTADQSQQP FSLCARNVVL ATGMSDSPAR LGIPGEALPF VHRDLSALEA ENSP00000355374/1-477 LT-RNQAQQP FSLWARNVVL ATGTFDSPAR LGIPGEALPF IHHELSALEA ENSBTAP00000048496/1-478 VTAEDQSQQS FSLRAHNVVL ATGTSDSPAR LGIPGEALPF VHHDLSALEA bmy_22319T0/1-498 VTAEDRSQQP FSLCARNVVL ATGTSDSPAR LGIPGEALPF VHHDLSALEA BACU009710/1-478 VTAEDRSQQP FSLCARNVVL ATGTSDSPAR LGIPGEALPF VHHDLSALEA 301 350 ENSTTRP00000016255/1-488 ATRAGTVSPS SDPVLIIGAG LSAADAVLYA RHYNIPVIHA FRRSVDDPGL ENSP00000355374/1-477 ATRVGAVTPA SDPVLIIGAG LSAADAVLYA RHYNIPVIHA FRRAVDDPGL ENSBTAP00000048496/1-478 ATQAGTVSPS SDPVLIIGAG LSAADAVLYA RHYSVPVIHA FRRPVDDPGL bmy_22319T0/1-498 ATRAGTMSPA SDPVLIIGAG LSAADAVLYA RHYNIPVIHA FRRSVDDPGL BACU009710/1-478 ATRAGTMSPA SDPVLIIGAG LSAADAVLYA RHYNIPVIHA FRRSVDDPGL 351 400 ENSTTRP00000016255/1-488 VFNQLPKMLY PEYHKVHQMM REQSILSPSP YEGYRSLPEH QLLLLREDRQ ENSP00000355374/1-477 VFNQLPKMLY PEYHKVHQMM REQSILSPSP YEGYRSLPRH QLLCFKEDCQ ENSBTAP00000048496/1-478 VFNQLPKMLY PEYHKVHQMM REQSILSPSP YEGYRSLPEH QLLLLKEDRQ bmy_22319T0/1-498 VFNQLPKMLY PEYHKVHQMM REQSILSPRP YEGYRSLPEH QLLLFKEDRQ BACU009710/1-478 VFNQLPKMLY PEYHKVHQMM REQSILSPSP YEGYRSLPEH QLLLFKEDRQ 401 450 ENSTTRP00000016255/1-488 AVFRDPRGLQ KVFGIALVLA LIGSHPDLSF LPGAGADLAT DPSQPLSAKR ENSP00000355374/1-477 AVFQDLEGVE KVFGVSLVLV LIGSHPDLSF LPGAGADFAV DPDQPLSAKR ENSBTAP00000048496/1-478 AVFRDPQGLQ KVFGVALVLV LIGSHPDLSF LPGAGTDLAV DPDQPLSAKR bmy_22319T0/1-498 AVFRDPQGLQ KVFGIALVLV LIGSHPDLSF LPGAGADLTM DPNQPLSAKR BACU009710/1-478 AVFRDPQGLQ KVFGIALVLV LIGSHPDLSF LPGAGADLAM DPNQPLSAKR 451 500 ENSTTRP00000016255/1-488 NPIDVDPFTY QSVHREGLYA VGPLAGDNFV RFVQGGALAV ASSLLRKEAR ENSP00000355374/1-477 NPIDVDPFTY QSTRQEGLYA MGPLAGDNFV RFVQGGALAV ASSLLRKETR ENSBTAP00000048496/1-478 NPIEVDPFTY QTIHQEGLYA MGPLAGDNFV RFVQGGALAV ASSLLRKEAR bmy_22319T0/1-498 NPIDVDPFTY QSIHQEGLYA VGPLAGDNFV RFVQGGALAV ASSLLRKEAR BACU009710/1-478 NPIDVDPFTY QSIHQEGLYA VGPLAGDNFV RFVQGGALAV ASSLLRKEAR 501 550 ENSTTRP00000016255/1-488 KPP ENSP00000355374/1-477 KPP ENSBTAP00000048496/1-478 KPP bmy_22319T0/1-498 KPP BACU009710/1-478 KPP