KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:59:14 2014 Check: 00 .. Name: bmy_02192T0/1-170 Len: 373 Check: 2132 Weight: 1.00 Name: ENSP00000355094/1-341 Len: 373 Check: 2309 Weight: 1.00 Name: ENSTTRP00000011430/1-345 Len: 373 Check: 2319 Weight: 1.00 Name: ENSBTAP00000048511/1-315 Len: 373 Check: 6854 Weight: 1.00 // 1 50 bmy_02192T0/1-170 ---------- ---------- ---------- ---------- ---------- ENSP00000355094/1-341 ----MVGEME TKEKPKPTPD YLMQLMNDKK LMSSLPNFCG IFNHLERLLD ENSTTRP00000011430/1-345 GAWNMVREME TKEKPKPPPD YLMQLMNDKK LMSSLPNFCG IFNHLERLLD ENSBTAP00000048511/1-315 ---------- ---------- ---------- LLFTLPCFCG ILTHLKFLLL 51 100 bmy_02192T0/1-170 ---------- ---------- ---------- ---------- ---------- ENSP00000355094/1-341 EEISRVRKDM YNDTLNGSTE KRSAELPDAV GPIVQLQEKL YVPVKEYPDF ENSTTRP00000011430/1-345 EEISRVRKDM YNDTLNGSTE KRSAELPDAV GPIVQLQEKL YVPVKEYPDF ENSBTAP00000048511/1-315 TEISRVRKDM YNDTLNGSTE KRSAELPDAV GPIVQLQEKL YVPVKEYPDF 101 150 bmy_02192T0/1-170 ---------- ---------- ---------- ---------- ---------- ENSP00000355094/1-341 NFVGRILGPR GLTAKQLEAE TGCKIMVRGK GSMRDKKKEE QNRGKPNWEH ENSTTRP00000011430/1-345 NFVGRILGPR GLTAKQLEAE TGCKIMVRGK GSMRDKKKEE QNRGKPNWEH ENSBTAP00000048511/1-315 NFVGRILGPR GLTAKQLEAE TGCKIMVRGK GSMRDKKKEE QNRGKPNWEH 151 200 bmy_02192T0/1-170 ---------- ---------- ---------- ---------- -----MQLME ENSP00000355094/1-341 LNEDLHVLIT VEDAQNRAEI KLKRAVEEVK KLLVPAAEGE DSLKKMQLME ENSTTRP00000011430/1-345 LNEDLHVLIT VEDAQNRAEI KLKRAVEEVK KLLVPAAEGE DSLKKMQLME ENSBTAP00000048511/1-315 LNEDLHVLIT VEDAQNRAEI KLKRAVEEVK KLLVPAAEGE DSLKKMQLME 201 250 bmy_02192T0/1-170 LAILNGTYRD ANIKSP---- ----TAQAAP RVITGPAPVL PPAALRTPTP ENSP00000355094/1-341 LAILNGTYRD ANIKSPALAF SLAATAQAAP RIITGPAPVL PPAALRTPTP ENSTTRP00000011430/1-345 LAILNGTYRD ANIKSPALAF SLAATAQAAP RVITGPAPVL PPAALRTPTP ENSBTAP00000048511/1-315 LAILNGTYRD ANIKSPALAF SLAATAQAAP RIITGPAPVL PPAALRTPTP 251 300 bmy_02192T0/1-170 AGPTIMPLIR QIQTAVMPNG TPHPAAAIVP PGPEAGLIYT PYEYPYTLAP ENSP00000355094/1-341 AGPTIMPLIR QIQTAVMPNG TPHPTAAIVP PGPEAGLIYT PYEYPYTLAP ENSTTRP00000011430/1-345 AGPTIMPLIR QIQTAVMPNG TPHPAAAIVP PGPEAGLIYT PYEYPYTLAP ENSBTAP00000048511/1-315 AGPTIMPLIR QIQTAVMPNG TPHPTAAIVP PGPEAGLIYT PYEYPYTLAP 301 350 bmy_02192T0/1-170 ATSILEYPIE PSGVLGAVAT KVRRHDMRVH PYQRIVTADR GKISKFREDL ENSP00000355094/1-341 ATSILEYPIE PSGVLGAVAT KVRRHDMRVH PYQRIVTADR AATGN----- ENSTTRP00000011430/1-345 ATSILEYPIE PSGVLGAVAT KVRRHDMRVH PYQRIVTADR AATGN----- ENSBTAP00000048511/1-315 ATSILEYPIE PSGVLGAVAT KVRRHDMRVH PYQRIVTADR AATGN----- 351 400 bmy_02192T0/1-170 VTLKIHRHRQ LTYDLLTSEL FTQ ENSP00000355094/1-341 ---------- ---------- --- ENSTTRP00000011430/1-345 ---------- ---------- --- ENSBTAP00000048511/1-315 ---------- ---------- ---