KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:59:14 2014 Check: 00 .. Name: ENSTTRP00000001197/1-272 Len: 272 Check: 9099 Weight: 1.00 Name: bmy_07990T0/1-182 Len: 272 Check: 2570 Weight: 1.00 Name: BACU003368/1-257 Len: 272 Check: 8100 Weight: 1.00 Name: ENSP00000334738/1-271 Len: 272 Check: 5936 Weight: 1.00 Name: ENSBTAP00000048516/1-271 Len: 272 Check: 5647 Weight: 1.00 // 1 50 ENSTTRP00000001197/1-272 MVLIKEFRVV LPCSVQEYQV GQLYSVAEAS KNETGGGEGI EVLKNEPYEK bmy_07990T0/1-182 MVLIKEFRVV LPCSVQEYQV GQLYSVAEAS KNETGGGEGI EVLKNEPYEX BACU003368/1-257 ---------- ----IFQYQV GQLYSVAEAS KNETGGGEGI EVLKNEPYEK ENSP00000334738/1-271 MVLIKEFRVV LPCSVQEYQV GQLYSVAEAS KNETGGGEGI EVLKNEPYEK ENSBTAP00000048516/1-271 MVLIKEFRVV LPCSVQEYQV GQLYSVAEAS KNETGGGEGI EVLKNEPYEK 51 100 ENSTTRP00000001197/1-272 DGEKGQYTHK IYHLKSKVPA FVRMIAPEGS LVFHEKAWNA YPYCRTIVTN bmy_07990T0/1-182 DGEKGQYTHK IYHLKSKVPA FVRMIAPEGS LVFHEKAWNA YPYCRTIVTN BACU003368/1-257 DGEKGQYTHK IYHLKSKVPA FVRMIAPEGS LVFHEKAWNA YPYCRTIVTN ENSP00000334738/1-271 DGEKGQYTHK IYHLKSKVPA FVRMIAPEGS LVFHEKAWNA YPYCRTIVTN ENSBTAP00000048516/1-271 DGEKGQYTHK IYHLKSKVPA FVRMIAPEGS LVFHEKAWNA YPYCRTIVTN 101 150 ENSTTRP00000001197/1-272 EYMKDDFFIK IETWHKPDLG TLENVHGLDP NTWKTVEVVH IDIADRSQVE bmy_07990T0/1-182 EYMKDDFFIK IETWHKPDLG TLENVHGLDP NTWKTVEIVH IDIADRSQVE BACU003368/1-257 EYMKDDFFIK IETWHKPDLG TLENVHGLDP NTWKTVEIVH IDIADRSQVE ENSP00000334738/1-271 EYMKDDFFIK IETWHKPDLG TLENVHGLDP NTWKTVEIVH IDIADRSQVE ENSBTAP00000048516/1-271 EYMKDDFFIK IETWHKPDLG TLENVHGLDP NTWKTVEIVH IDIADRSQVE 151 200 ENSTTRP00000001197/1-272 PADYKADEDP ALFQSVKTKR GPLGPNWKKE LASNPDCPQM CAYKLVTIKF bmy_07990T0/1-182 PADYKADEDP ALFQSVKTKR GPLGPNWKE- ---------- ---------- BACU003368/1-257 PADYKADEDP ALFQSVKTKR GPLGPNWKKE LASNPDCPQM CAYKLVTIKF ENSP00000334738/1-271 PADYKADEDP ALFQSVKTKR GPLGPNWKKE LANSPDCPQM CAYKLVTIKF ENSBTAP00000048516/1-271 PADYKADEDP ALFQSVKTKR GPLGPNWKKE LANNPDCPQM CAYKLVTIKF 201 250 ENSTTRP00000001197/1-272 KWWGLQSKVE NFIQKQEKRI FTNFHRQLFC WIDKWIDLTM EDIRRMEDET bmy_07990T0/1-182 --LGI----- ---------- ---------- ---------- ---------- BACU003368/1-257 KWWGLQSKVE NFIQKQEKRI FTNFHRQLFC WIDKWIDLTM EDIRRMEDET ENSP00000334738/1-271 KWWGLQSKVE NFIQKQEKRI FTNFHRQLFC WIDKWIDLTM EDIRRMEDET ENSBTAP00000048516/1-271 KWWGLQSKVE NFIQKQEKRI FTNFHRQLFC WIDKWIDLTM EDIRRMEDET 251 300 ENSTTRP00000001197/1-272 QKELETLRNQ GQVRGTSAAS DE bmy_07990T0/1-182 ---------- ---------- -- BACU003368/1-257 QKELETMRKK GSVRGTSAAD V- ENSP00000334738/1-271 QKELETMRKR GSVRGTSAAD V- ENSBTAP00000048516/1-271 QKELETMRKK GSVRGTSAAD V-