KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:59:15 2014 Check: 00 .. Name: ENSP00000365895/1-471 Len: 511 Check: 2901 Weight: 1.00 Name: ENSBTAP00000048528/1-249 Len: 511 Check: 165 Weight: 1.00 Name: bmy_07104T0/1-230 Len: 511 Check: 7612 Weight: 1.00 Name: BACU017461/1-269 Len: 511 Check: 4873 Weight: 1.00 // 1 50 ENSP00000365895/1-471 MDERFNKWLL TPVLTLLFVV IMYQYVSPSC TSSCTNFGEQ PRAGEAGPPA ENSBTAP00000048528/1-249 ---------- ---------- ---------- ---------- ---------- bmy_07104T0/1-230 ---------- ---------- ---------- ---------- ---------- BACU017461/1-269 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000365895/1-471 VPGPARRAQA PPEEWERRPQ LPPPPRGPPE GPRGAAAPEE EDEEPGDPRE ENSBTAP00000048528/1-249 ---------- ---------- ---------- ---------- ---------- bmy_07104T0/1-230 ---------- ---------- ---------- ---------- ---------- BACU017461/1-269 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000365895/1-471 GEEEEEEDEP DPEAPENGSL PRFVPRFNFS LKDLTRFVDF NIKGRDVIVF ENSBTAP00000048528/1-249 ---------- ---------- ---------- ---------- ---------- bmy_07104T0/1-230 ---------- ---------- ---------- ---------- ---------- BACU017461/1-269 ---------- ---------- ---------- ---------- ---------- 151 200 ENSP00000365895/1-471 LHIQKTGGTT FGRHLVKNIR LEQPCSCKAG QKKCTCHRPG KKETWLFSRF ENSBTAP00000048528/1-249 ---------- ---------- ---------- ---------- ---------- bmy_07104T0/1-230 ---------- ---------- ---------- ---------- ---------- BACU017461/1-269 ---------- ---------- ---------- ---------- ---------- 201 250 ENSP00000365895/1-471 STGWSCGLHA DWTELTNCVP AIMEKKDCPR NHSHTRNFYY ITMLRDPVSR ENSBTAP00000048528/1-249 ---------- ---------- --MNYFSQPQ PSPHCENFYY ITMLRDPVSR bmy_07104T0/1-230 ---------- ---------- ---------- ---------- --MLRDPVSR BACU017461/1-269 ---------- ---------- ---------- ---------- --MLRDPVSR 251 300 ENSP00000365895/1-471 YLSEWKHVQR GATWKTSLHM CDGRSPTPDE LPTCYPGDDW SGVSLREFMD ENSBTAP00000048528/1-249 YLSEWKHVQR GATWKTSLHM CDGRSPTPDE LPTCYPGDDW SGVSLREFMD bmy_07104T0/1-230 YLSEWKHVQR GATWKTSLHM CDGRSPTPNE LPTCYPGDDW SGVSLREFMD BACU017461/1-269 YLSEWKHVQR GATWKTSLHM CDGRSPTPNE LPTCYPGDDW SGVSLREFMD 301 350 ENSP00000365895/1-471 CTYNLANNRQ VRMLADLSLV GCYNLTFMNE SERNTILLQS AKNNLKNMAF ENSBTAP00000048528/1-249 CTYNLANNRQ VRMLADLSLV GCYNLTFMNE SERNAILLQS AKSNLKNMAF bmy_07104T0/1-230 CTYNLANNRQ VRMLADLSLV GCYNLTFMNE SERNAILLQS AKGNLKNMAF BACU017461/1-269 CTYNLASNRQ VRMLADLSLV GCYNLTFMNE SERNAILLQS AKGNLKNMAF 351 400 ENSP00000365895/1-471 FGLTEFQRKT QFLFERTFNL KFISPFTQFN ITRASNVEIN EGARQRIEDL ENSBTAP00000048528/1-249 FGLTEFQRKT QFLFERTFNL KFISPFTQFN ITRASNVEIN EGARRRIEEL bmy_07104T0/1-230 FGLTEFQRKT QFLFERTFNL KFISPFTQFN VTRASNVEIH EGARRRIEEL BACU017461/1-269 FGLTEFQRKT QFLFERTFNL KFISPFTQFN VTRASNVEIN EGARQRIEEL 401 450 ENSP00000365895/1-471 NFLDMQLYEY AKDLFQQRYH HTKQLEHQRD RQKRREERRL QREHRDHQ-W ENSBTAP00000048528/1-249 NFLDVQLYEY AKDLFQQRYH RTKQLERQRD RQRRRGERRL QRDHRGHR-W bmy_07104T0/1-230 NFLDVQLYAY AKDLFQQRYR RTKQLERRRD RQKRREKRRL QRERGGHRPV BACU017461/1-269 NFLDVQLYAY AKDLFQQRYH RTKQLERRRD RLKRREKRRL QREQRGHRPG 451 500 ENSP00000365895/1-471 PKEDGAAEGT VTEDYNSQV- --VRW----- ---------- ---------- ENSBTAP00000048528/1-249 PKQEGNPEGA VTEDYNSQV- --VRW----- ---------- ---------- bmy_07104T0/1-230 HRQDGSPERA VTEDYTSQV- --VRW----- ---------- ---------- BACU017461/1-269 HRQDGSPERA VTEDYTSQVL LYVHWSAELQ LKVCRILRSP EHIAALPTVL 501 550 ENSP00000365895/1-471 ---------- - ENSBTAP00000048528/1-249 ---------- - bmy_07104T0/1-230 ---------- - BACU017461/1-269 LQDPGGDHMD Q