KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:59:16 2014 Check: 00 .. Name: BACU017653/1-638 Len: 670 Check: 6337 Weight: 1.00 Name: ENSTTRP00000011030/1-554 Len: 670 Check: 6584 Weight: 1.00 Name: ENSP00000468782/1-619 Len: 670 Check: 1938 Weight: 1.00 Name: bmy_12097T0/1-643 Len: 670 Check: 1063 Weight: 1.00 Name: ENSBTAP00000048542/1-612 Len: 670 Check: 8589 Weight: 1.00 // 1 50 BACU017653/1-638 ---------- ---------- ---MANGIDE LIGI----HS SEVLCSLNEQ ENSTTRP00000011030/1-554 ---------- ---------- ---MANGIDE LIGIPFPNHS SEVLCSLNEQ ENSP00000468782/1-619 ---------- ---------- ---MANDIDE LIGIPFPNHS SEVLCSLNEQ bmy_12097T0/1-643 MSSRLFFHHK AQQRPRHRAL AENMANGIDE LIGIPFPNHS SEVLCSLNEQ ENSBTAP00000048542/1-612 ---------- ---------- ---MANGIDE LIGIPFPNHS SEVLCSLNEQ 51 100 BACU017653/1-638 RHDGLLCDVL LVVQEQEYRT HRSVLAACSK YFKKLFTAGT LASQPYVYEI ENSTTRP00000011030/1-554 RHDGLLCDVL LVVQEQEYRT HRSVLAACSK YFKKLFTAGT LASQPYVYEI ENSP00000468782/1-619 RHDGLLCDVL LVVQEQEYRT HRSVLAACSK YFKKLFTAGT LASQPYVYEI bmy_12097T0/1-643 RHDGLLCDVL LVVQEQEYRT HRSVLAACSK YFKKLFTAGT LASQPYVYEI ENSBTAP00000048542/1-612 RHDGLLCDVL LVVQEQEYRT HRSVLAACSK YFKKLFTAGT LASQPYVYEI 101 150 BACU017653/1-638 DFVQPEALAA ILEFAYTSTL TITASNVKHI LNAARMLEIQ CIVNVCLEIM ENSTTRP00000011030/1-554 DFVQPEALAA ILEFAYTSTL TITASNVKHI LNAARMLEIQ CIVNVCLEIM ENSP00000468782/1-619 DFVQPEALAA ILEFAYTSTL TITAGNVKHI LNAARMLEIQ CIVNVCLEIM bmy_12097T0/1-643 DFVQPEALAA ILEFAYTSTL TITASNVKHI LNAARMLEIQ CIVNVCLEIM ENSBTAP00000048542/1-612 DFVQPEALAA ILEFAYTSTL TITASNVKHI LNAARMLEIQ CIVNVCLEIM 151 200 BACU017653/1-638 EPGGNGGEED DKEDDDDDED DDDEED-EEE EEEEEEEEDD DTEDFADQEN ENSTTRP00000011030/1-554 EPGGDGEEED DKED------ ---------- ---------- ---------- ENSP00000468782/1-619 EPGGDGGEED DKEDDDDDED DDDEED-EEE EEEEEEDDDD DTEDFADQEN bmy_12097T0/1-643 EPGGNGGEED DKEDDDDDED DDDEEDEEEE EEEEEEEEDD DTEDFADQEN ENSBTAP00000048542/1-612 EPGG------ DKEDDDDDEE DDDEDE-EEE EEEEEEDDDD DTEDFADQEN 201 250 BACU017653/1-638 LPDPQDINCH QSPSKTDHLS EKPYSDTPRD FPDSFRAGSP GHLGVIRDFS ENSTTRP00000011030/1-554 ---------- ---------- ---------D XXDSFRAGSS CHLGGIRDFS ENSP00000468782/1-619 LPDPQDISCH QSPSKTDHLT EKAYSDTPRD FPDSFQAGSP GHLGVIRDFS bmy_12097T0/1-643 LPDPQDINCH QSPSKTDHLS EKAYSDTPRD FPDSFRAGSP GHLGVIRDFS ENSBTAP00000048542/1-612 LPDPQDISCH QSPSKSDHLS EKAYSDTPRD FPDSFQAGSP SHLGVIRDFS 251 300 BACU017653/1-638 IESLLRENLY PKANIPDRRT SLSPFAPDFF PHLWSGDFGA FSQLPEQPMD ENSTTRP00000011030/1-554 IESLLRENLY PKANIPDRRP SLSPFAPDFF PHLWSGDFGA FAQLPEQPMD ENSP00000468782/1-619 IESLLRENLY PKANIPDRRP SLSPFAPDFF PHLWPGDFGA FAQLPEQPMD bmy_12097T0/1-643 IESLLRENLY PKANIPDRRP SLSPFAPDFF PHLWSGDFGA FAQLPEQPMD ENSBTAP00000048542/1-612 IESLLRE-LY PKASLPDRRP SLSPFAPDFF PHLWPGDFGA FAQLPEQPMD 301 350 BACU017653/1-638 SGPLDLVIKN RKIKEEEKEE LPPPPPPPFP SDFFKDMFPD LPGGPLGPIK ENSTTRP00000011030/1-554 SGPLDLVIKN RKIKEEERGE LPPPPPPPFP SDFFKAMFPD LPGGPLGPIK ENSP00000468782/1-619 SGPLDLVIKN RKIKEEEKEE LPPPPPPPFP NDFFKDMFPD LPGGPLGPIK bmy_12097T0/1-643 SGPLDLVIKN RKIKEEEKEE LPPPPPPPFP SDFFKDMFPD LPGGPLGPIK ENSBTAP00000048542/1-612 SGPLDLVIKN RKIKEEEKEE LPPPPPPPFP NDFFKDMFPD LPGGPLGPIK 351 400 BACU017653/1-638 AENDYGAYLN FLSATHLGGL FPPWPLVEER KLKPKASQQC PICHKVIMGA ENSTTRP00000011030/1-554 AENDYGAYLN FLSATHLGGL FPPWPLVEER KLKPKASQQC PICHKVIMGA ENSP00000468782/1-619 AENDYGAYLN FLSATHLGGL FPPWPLVEER KLKPKASQQC PICHKVIMGA bmy_12097T0/1-643 AENDYGAYLN FLSATHLGGL FPPWPLVEER KLKPKASQQC PICHKVIMGA ENSBTAP00000048542/1-612 AENDYGAYLN FLSATHLGGL FPPWPLVEER KLKPKASQQC PICHKVIMGA 401 450 BACU017653/1-638 GKLPRHMRTH TGEKPYMCNI CEVRFTRQDK LKIHMRKHTG ERPYLCIHCN ENSTTRP00000011030/1-554 GKLPRHMRTH TGEKPYMCNI CEVRFTRQDK LKIHMRKHTG ERPYLCIHCN ENSP00000468782/1-619 GKLPRHMRTH TGEKPYMCTI CEVRFTRQDK LKIHMRKHTG ERPYLCIHCN bmy_12097T0/1-643 GKLPRHMRTH TGEKPYMCNI CEVRFTRQDK LKIHMRKHTG ERPYLCIHCN ENSBTAP00000048542/1-612 GKLPRHMRTH TGEKPYMCNI CEVRFTRQDK LKIHMRKHTG ERPYLCIHCN 451 500 BACU017653/1-638 AKFVHNYDLK NHMRIHTGVR PYQCEFCYKS FTRSDHLHRH IKRQSCRMAR ENSTTRP00000011030/1-554 AKFVHNYDLK NHMRIHTGVR PYQCEFCYKS FTRSDHLHRH IKRQSCRMAR ENSP00000468782/1-619 AKFVHNYDLK NHMRIHTGVR PYQCEFCYKS FTRSDHLHRH IKRQSCRMAR bmy_12097T0/1-643 AKFVHNYDLK NHMRIHTGVR PYQCEFCYKS FTRSDHLHRH IKRQSCRMAR ENSBTAP00000048542/1-612 AKFVHNYDLK NHMRIHTGVR PYQCEFCYKS FTRSDHLHRH IKRQSCRMAR 501 550 BACU017653/1-638 PRRGXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSTTRP00000011030/1-554 PRRGRKPGAW RAAS-LFGPG GPAPEKAAFV MPPALGDVGG HLGGAAVCLP ENSP00000468782/1-619 PRRGRKPAAW RAASLLFGPG GPAPDKAAFV MPPALGEVGG HLGGAAVCLP bmy_12097T0/1-643 PRRGRKPAAW RAASLLFGPG GPAPEKAAFV MPPALGDVGG HLGGAAVCLP ENSBTAP00000048542/1-612 PRRGRKPAAW RAASLLFGPG GPAPEKAAFV MPPALGDVGG HLGGAAVCLP 551 600 BACU017653/1-638 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSTTRP00000011030/1-554 GPSPAKHFLA APKGALSLQE LERQFEETQM KLFGRAQLEA ERNA------ ENSP00000468782/1-619 GPSPAKHFLA APKGALSLQE LERQFEETQM KLFGRAQLEA ERNA------ bmy_12097T0/1-643 GPSPAKHFLA APKGALSLQE LERQFEETQM KLFGRAQLEA ERNA------ ENSBTAP00000048542/1-612 GPSPAKHFLA APKGALSLQE LERQFEETQM KLFGRAQLEA ERNA------ 601 650 BACU017653/1-638 XXXXXXXXXX XXXXAGGRAE RGGPLGHRAG RERGRRASLL PAARPVGRG- ENSTTRP00000011030/1-554 ---------- ---------- -GGLLAFALA ENVAAARPYF PLPDPWAAGL ENSP00000468782/1-619 ---------- ---------- -GGLLAFALA ENVAAARPYF PLPDPWAAGL bmy_12097T0/1-643 ---------- ---------- -GGLLAFALA ENVAAARPYF PLPDPWAAGL ENSBTAP00000048542/1-612 ---------- ---------- -GGLLAFALA ENVAAARPYF PLPDPWAAGL 651 700 BACU017653/1-638 ---PGRPPRA RRPQPRGLHV ENSTTRP00000011030/1-554 AGLPGLTGLN HVASMSEANN ENSP00000468782/1-619 AGLPGLAGLN HVASMSEANN bmy_12097T0/1-643 AGLPGLAGLN HVASMSEANN ENSBTAP00000048542/1-612 AGLPGLAGLN HVASMSEANN