KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:59:16 2014 Check: 00 .. Name: ENSP00000381030/1-396 Len: 475 Check: 8430 Weight: 1.00 Name: ENSTTRP00000012081/1-394 Len: 475 Check: 5698 Weight: 1.00 Name: ENSBTAP00000048543/1-366 Len: 475 Check: 8157 Weight: 1.00 Name: bmy_21671T0/1-395 Len: 475 Check: 4014 Weight: 1.00 Name: BACU015999/1-458 Len: 475 Check: 5863 Weight: 1.00 // 1 50 ENSP00000381030/1-396 MGANTSRKPP VFDENEDVNF DHFEILRAIG KGSFGKVCIV QKNDTKKMYA ENSTTRP00000012081/1-394 MGANTSSKPP VFDENDDVNF DHFEILRAIG KGSFGKVCIV QKNDTKKMYA ENSBTAP00000048543/1-366 MGANTSSKPP VFDENDDVNF DHFEILRAIG KGSFGKVCIV QKNDTKKMYA bmy_21671T0/1-395 MGANTSSKPP VFDENDDVNF DHFEILRAIG KGSFGKVCIV QKNDTKKMYA BACU015999/1-458 ---------- ------TVNF DHFEILRAIG KGSFGKVCIV QKNDTKKMYA 51 100 ENSP00000381030/1-396 MKYMNKQKCV ERNEVRNVFK ELQIMQGLEH PFLVNL---- ---------- ENSTTRP00000012081/1-394 MKYMNKQKCV ERNEVRNVFK ELQIMQGLEH PFLVNL---- ---------- ENSBTAP00000048543/1-366 MKYMNKQKCV ERNEVRNVFK ELQIMQGLEH PFLVNL---- ---------- bmy_21671T0/1-395 MKYMNKQKCV ERNEVRNVFK ELQIMQGLEH PFLVNL---- ---------- BACU015999/1-458 MKYMNKQKCV ERNEVRNVFK ELQIMQGLEH PFLVNLCPQN NRPSPAQCSR 101 150 ENSP00000381030/1-396 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000012081/1-394 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000048543/1-366 ---------- ---------- ---------- ---------- ---------- bmy_21671T0/1-395 ---------- ---------- ---------- ---------- ---------- BACU015999/1-458 SPGGFCSLRL SLQLRTATQG SELSSLFSSC PVNPKGPRVI SGNEEMRLSV 151 200 ENSP00000381030/1-396 --------W- ------YSFQ DEEDMFMVVD LLLGGDLRYH LQQNVHFKEE ENSTTRP00000012081/1-394 --------W- ------YSFQ DEEDMFMVVD LLL-GDLRYH LQQNVRFQED ENSBTAP00000048543/1-366 --------W- ------YSFQ DEEDMFMVVD LLLGGDLRYH LQQNVRFQED bmy_21671T0/1-395 --------W- ------YSFQ DEEDMFMVVD LLLGGDLRYH LQQNVRFQED BACU015999/1-458 FNEKDHWYWE CEKGAPYSFQ DEEDMFMVVD LLLGGDLRYH LQQNVRFQED 201 250 ENSP00000381030/1-396 TVKLFICELV MALDYLQNQR IIHRDMKPDN ILLDEHGHVH ITDFNIAAML ENSTTRP00000012081/1-394 TVKLFICELA MALDYLQSQR IIHRDMKPDN ILLDEHGHVH ITDFNIATML ENSBTAP00000048543/1-366 TVKLFICELA MALDYLQSQR IIHRDMKPDN ILLDEHGHVH ITDFNIATML bmy_21671T0/1-395 TVKLFICELA MALDYLRSQR IIHRDMKPDN ILLDEHGHVH ITDFNIATML BACU015999/1-458 TVKLFICELA MALDYLRSQR IIHRDMKPDN ILLDEHGHVH ITDFNIATML 251 300 ENSP00000381030/1-396 PRETQITTMA GTKPYMAPEM FSSRKGAGYS FAVDWWSLGV TAYELLRGRR ENSTTRP00000012081/1-394 PVEMCITTMA GTKPYMAPEM FNSRREAGYS FAVDWWSLGV TAYELLRGRR ENSBTAP00000048543/1-366 PGEMRITTVA GTKPYMAPEM FNSRREAGYS FAVDWWSLGV TAYELLRGRR bmy_21671T0/1-395 PVEMCITTVA GTKPYMAPEM FNSRREAGYS FAVDWWSLGV TAYELLRGRR BACU015999/1-458 PVEMCIATVA GTKPYMAPEM FNSRREAGYS FAVDWWSLGV TAYELLRGRR 301 350 ENSP00000381030/1-396 PYHIRSSTSS KEIVHTFETT VVTYPSAWSQ EMVSLLKKLL EPNPDQRFSQ ENSTTRP00000012081/1-394 PYHIRSSTSS KEIAHMFETA LVTYPSAWSQ EMVSLLKKLL EPNPDQRFSH ENSBTAP00000048543/1-366 PYHIRSSTSS KEIAHMFETA LVTYPSAWSQ EMVSLLKKLL ELNPDHRFSH bmy_21671T0/1-395 PYHIRSSTSS KEIAHMFETA LVTYPSAWSQ EMVSLLKKLL EPNPDQRFSH BACU015999/1-458 PYHIRSSTSS KEIAHMFETA LVTYPSAWSQ EMVSLLKKLL EPNPDQRFSH 351 400 ENSP00000381030/1-396 LSDVQNFPYM NDINWDAVFQ KRLIPGFIPN KGRLNCDPTF ELEEMILESK ENSTTRP00000012081/1-394 LSDVQSFPYM NDMNWDAVLQ KRLIPGFIPN KCRLSCDPTF ELEEMILESK ENSBTAP00000048543/1-366 LSDIQNFPYM NDMNWDAVLQ KRLIPGFVPN KGRLNCDPTF ELEEMILESK bmy_21671T0/1-395 LSDIQNFPYM NDMNWDAVLQ KRLIPGFIPN KGRLNCDPTF ELEEMILESK BACU015999/1-458 LSDIQNFPYM NDMNWDAVLQ KRLIPGFIPN KGRLNCDPTF ELEEMILESK 401 450 ENSP00000381030/1-396 PLHKKKKRLA KKEKDMRKCD SSQTCLLQEH LDSVQKEFII FNREKVNRDF ENSTTRP00000012081/1-394 PXXXXXXXXX XXXXXXXXXX XXXMCLLQEH LESVQKEFII FNREKVKKDF ENSBTAP00000048543/1-366 PLHKKKKRLA KKEKETRKCD SSQTCLLQEH LESVQKEFII FNREK----- bmy_21671T0/1-395 PLHKKKKRLA KKEK-MRKCD SSQMCLLQEH LESVQKEFII FNREKVKKDF BACU015999/1-458 PLHKKKKRLA KKEK-MRKCD SSQMWLLQEH LESVQKEFII FNREKVKKDF 451 500 ENSP00000381030/1-396 NKRQPNLALE QTKDPQGEDG QNNNL ENSTTRP00000012081/1-394 NKRQANQALE QTKDPQEKDG RNNT- ENSBTAP00000048543/1-366 ---------- ---------- ----- bmy_21671T0/1-395 NKRQANQALE QTKDPQEEDG QNNNL BACU015999/1-458 NKRQANQALE QTKDPQEEDG QNNNL