KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:59:19 2014 Check: 00 .. Name: ENSP00000254803/1-479 Len: 481 Check: 1593 Weight: 1.00 Name: ENSBTAP00000048599/1-474 Len: 481 Check: 3388 Weight: 1.00 Name: ENSTTRP00000007947/1-471 Len: 481 Check: 8532 Weight: 1.00 Name: bmy_18439T0/1-469 Len: 481 Check: 8784 Weight: 1.00 Name: BACU015734/1-469 Len: 481 Check: 215 Weight: 1.00 // 1 50 ENSP00000254803/1-479 MVGRS--RRR GAAKWAAVRA KAGPTLTDEN GDDLGLPPSP GDTSYYQDQV ENSBTAP00000048599/1-474 MVGRSGRRAR GAAKWAAVRA KASRDPADDD GEDLESPPSP GDSSYYQDKV ENSTTRP00000007947/1-471 MVGRS--RRR GAAKWAAVRA KAGRDPADEN DDNLESPPSP ADSSYYQDKV bmy_18439T0/1-469 MVGRS--RRR GAAKWAAVRA KAGRDPADEN DDNLESPPSP GDSSYYQDKV BACU015734/1-469 MVGRS--RRR GAAKWAAVRA KAGRDPADEN DDNLESPPSP GDSSYYQDKV 51 100 ENSP00000254803/1-479 DDFHEARSRA ALAKGWNEVQ SGDEEDGEEE EEEVLALDMD DEDDEDGGNA ENSBTAP00000048599/1-474 DDFHEARSRA ALAKGWSEIE SGDEEDG-DE EEEVLALDVA DEDDEDGES- ENSTTRP00000007947/1-471 DDFHEARSRA ALAKGWSEVE SGAEEED-GD EEEVLALDIA DEDDEDEESA bmy_18439T0/1-469 DDFHEARSRA ALAKGWSEVE SGDEEED-GD EEEVLALDIA DEDDE--ESA BACU015734/1-469 DDFHEARSRA ALAKGWSEVE SGDEEED-GD EEEVLALDIA DEDDE--ESA 101 150 ENSP00000254803/1-479 GEEEEEENAD DDGGSSVQSE AEASVDPSLS WGQRKKLYYD TDYGSKSRGR ENSBTAP00000048599/1-474 --EEGD---D DDGGSSVQSE TEASVDPSLS WGQRKKLYYD TDYGSKSRGR ENSTTRP00000007947/1-471 GNEEDD---D DDGGSSMQSE AEASVDPSLS WGQRKKLYYD TDYGSKSRGR bmy_18439T0/1-469 GNEEDD---D DDGGSSMQSE AEASVDPSLS WGQRKKLYYD TDYGSKSRGR BACU015734/1-469 GNEEED---D DDGGSSMQSE AEASVDPSLS WGQRKKLYYD TDYGSKSRSR 151 200 ENSP00000254803/1-479 QSQQEAEEEE REEEEEAQII QRRLAQALQE DDFGVAWVEA FAKPVPQVDE ENSBTAP00000048599/1-474 QSQQEVEEEE REEEAEAQLI QRRLAQALQE DDFGVTWVEA FAKPVPQVNE ENSTTRP00000007947/1-471 QSQQEVEEEE REEEEEAQLI QRRLAQALQE DDFGVTWVEA FAKPVPRVNE bmy_18439T0/1-469 QSQQEVEEEE REEEEEAQLI QRRLAQALQE DDFGVTWVEA FAKPVPQVNE BACU015734/1-469 QSQQEVEEEE REEEEEAQLI QRRLAQALQE DDFGVTWVEA FAKPVPQVNE 201 250 ENSP00000254803/1-479 AETRVVKDLA KVSVKEKLKM LRKESPELLE LIEDLKVKLT EVKDELEPLL ENSBTAP00000048599/1-474 AETRVVKDLA KVSVKEKLKM LRKESPELLE LIDDLKVKLT EMKDELEPLL ENSTTRP00000007947/1-471 VETRVVKDLA KVSVREKLKM LRKESPELLE LIDDLKVKLT EVKDELEPLL bmy_18439T0/1-469 VETRVVKDLA KVSVKEKLKM LRKESPELLE LIDDLKVKLT EVKDELEPLL BACU015734/1-469 VETRVVKDLA KVSVKEKLKM LRKESPELLE LIDDLKVKLT EVKDELEPLL 251 300 ENSP00000254803/1-479 ELVEQGIIPP GKGSQYLRTK YNLYLNYCSN ISFYLILKAR RVPAHGHPVI ENSBTAP00000048599/1-474 QLVEQKIIPP GKGSQYLRTK YNLYLNYCSN ISFYLILKAR RVPAHGHPVI ENSTTRP00000007947/1-471 QLVEQKIIPP GKGSQYLRTK YNLYLNYCSN ISFYLILKAR RVPAHGHPVI bmy_18439T0/1-469 QLVEQKIIPP GKGSQYLRTK YNLYLNYCSN ISFYLILKAR RVPAHGHPVI BACU015734/1-469 QLVERKIIPP GKGSQYLRTK YNLYLNYCSN ISFYLILKAR RVPAHGHPVI 301 350 ENSP00000254803/1-479 ERLVTYRNLI NKLSVVDQKL SSEIRHLLTL KDDAVKKELI PKAKSTKPKP ENSBTAP00000048599/1-474 ERLVTYRNLI NKLSVVDQKL SSEIRYMLTL KDGAGKKELN LKAKSMKAKP ENSTTRP00000007947/1-471 ERLVTYRNLI NKLSFVDQKL SSEIRHLLTL KDDAGKAELN LKAKSTKAKP bmy_18439T0/1-469 ERLVTYRNLI NKLSVVDQKL SSEIRHLLTL KDGAGKEELN LKAKSTKAKP BACU015734/1-469 ERLVTYRNLI NKLSVVDQKL SSEIRHLLTL KDGAGKEELN LKAKSTKAKP 351 400 ENSP00000254803/1-479 KSVSKTSAAA CAVTDLSDDS DFDEKAKLKY YKEIEDRQKL KRKKEENSTE ENSBTAP00000048599/1-474 KSVSETSAAA LAVRDLSDDS DFDEEAALKY YKEMEERQKL KRKKEENSTE ENSTTRP00000007947/1-471 KSVS--AVAA SAVTDLSDDS DFDE-AALKY YKEIEDGQKL KRKKED-STE bmy_18439T0/1-469 KSVS--AVAA SAVTDLSDDS DFDE-AALKY YKEIEDRQKL KRKKED-STE BACU015734/1-469 KSVS--AVAA SAVTDLSDDS DFDE-AALKY YKEIEDRQKL KRKKED-STE 401 450 ENSP00000254803/1-479 EQALEDQNAK RAITYQIAKN RGLTPRRKKI DRNPRVKHRE KFRRAKIRRR ENSBTAP00000048599/1-474 EQALEDQNAK RAITYQIAKN RGLTPRRKKI DRNPRVKHRE KFRKAKIRRR ENSTTRP00000007947/1-471 EQALEVQNAK RAITYQIAKN RGLTPRRKKI DRNPRVKHRE KFRRAKIRRR bmy_18439T0/1-469 EQAPEVQNAK RAITYQIAKN RGLTPRRKKI DRNPRVKHRE KFRRAKIRRR BACU015734/1-469 EQAPEVQNTK RAITYQIAKN RGLTPRRKKI DRNPRVKHRE KFRRAKIRRR 451 500 ENSP00000254803/1-479 GQVREVRKEE QRYSGELSGI RAGVKKSIKL K ENSBTAP00000048599/1-474 GQVREVRREE QRYTGELSGI RAGVKKSIKL K ENSTTRP00000007947/1-471 GQVREVRREE QRYSGELSGI RAGVKKSIKL K bmy_18439T0/1-469 GQVREVRREE QRYSGELSGI RAGVKKSIKL K BACU015734/1-469 GQVREVRREE QRYSGELSGI RAGVKKSIKL K