KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:59:20 2014 Check: 00 .. Name: ENSTTRP00000003455/1-820 Len: 821 Check: 770 Weight: 1.00 Name: ENSP00000264156/1-821 Len: 821 Check: 1378 Weight: 1.00 Name: ENSBTAP00000048625/1-738 Len: 821 Check: 2590 Weight: 1.00 Name: bmy_10549T0/1-794 Len: 821 Check: 8889 Weight: 1.00 Name: BACU014940/1-821 Len: 821 Check: 1201 Weight: 1.00 // 1 50 ENSTTRP00000003455/1-820 MDLAAAAEPG AGSQHLEVRD EVAEKCQKLF VDFLEEFQNS DGEIKYLQLA ENSP00000264156/1-821 MDLAAAAEPG AGSQHLEVRD EVAEKCQKLF LDFLEEFQSS DGEIKYLQLA ENSBTAP00000048625/1-738 MDLAAAAEPG AGSQHLEVRD EVAEKCQKLF LDFLEEFQNS DGEIKYLQLA bmy_10549T0/1-794 MDLAAAAEPG AGSQHLEVRD EVAEKCQKLF LDFLEEFQNS DGEIKYLQLA BACU014940/1-821 MDLAAAAEPG AGSQHLEVRD EVAEKCQKLF LDFLEEFQNS DGEIKYLQLA 51 100 ENSTTRP00000003455/1-820 EELIRPERNT LVVSFLDLEQ FNQQLSTTIQ EEFYRVYPYL CRALKTFVKD ENSP00000264156/1-821 EELIRPERNT LVVSFVDLEQ FNQQLSTTIQ EEFYRVYPYL CRALKTFVKD ENSBTAP00000048625/1-738 EELIRPERNT LVVSFVDLEQ FNQQLSTTIQ EEFYRVYPYL CRALKTFVKD bmy_10549T0/1-794 EELIRPERNT LVVSFLDLEQ FNQQLSTTIQ EEFYRVYPYL CRALKTFVKD BACU014940/1-821 EELIRPERNT LVVSFLDLEQ FNQQLSTTIQ EEFYRVYPYL CRALKTFVKD 101 150 ENSTTRP00000003455/1-820 RKEIPLAKDF YVAFQDLPTR HKIRELNSSR IGLLTRISGQ VVRTHPVHPE ENSP00000264156/1-821 RKEIPLAKDF YVAFQDLPTR HKIRELTSSR IGLLTRISGQ VVRTHPVHPE ENSBTAP00000048625/1-738 RKEIPLAKDF YVAFQDLPTR HKIRELTSSR IGLLTRISGQ VVRTHPVHPE bmy_10549T0/1-794 RKEIPLAKDF YVAFQDLPTR HKIRELNSSR IGLLTRISGQ VVRTHPVHPE BACU014940/1-821 RKEIPLAKDF YVAFQDLPTR HKIRELNSSR IGLLTRISGQ VVRTHPVHPE 151 200 ENSTTRP00000003455/1-820 LVSGTFLCLD CQTVIKDVEQ QFRYTQPNIC RNPVCANRRR FLLDTNKSRF ENSP00000264156/1-821 LVSGTFLCLD CQTVIRDVEQ QFKYTQPNIC RNPVCANRRR FLLDTNKSRF ENSBTAP00000048625/1-738 LVSGTFLCLD CQTVIKDVEQ QFKYTQPNIC RNPVCANRRR FLLDTNKSRF bmy_10549T0/1-794 LVSGTFLCLD CQTVIKDVEQ QFRYTQPNIC RNPVCANRRR FLLDTNKSRF BACU014940/1-821 LVSGTFLCLD CQTVIKDVEQ QFRYTQPNIC RNPVCANRRR FLLDTNKSRF 201 250 ENSTTRP00000003455/1-820 VDFQKVRIQE TQAELPRGSI PRSLEVILRA EAVESAQAGD KCDFTGTLIV ENSP00000264156/1-821 VDFQKVRIQE TQAELPRGSI PRSLEVILRA EAVESAQAGD KCDFTGTLIV ENSBTAP00000048625/1-738 VDFQKVRIQE TQAELPRGSI PRSLEVILRA EAVESAQAGD KCDFTGTLIV bmy_10549T0/1-794 VDFQKVRIQE TQAELPRGSI PRSLEVILRA EAVESAQAGD KCDFTGTLIV BACU014940/1-821 VDFQKVRIQE TQAELPRGSI PRSLEVILRA EAVESAQAGD KCDFTGTLIV 251 300 ENSTTRP00000003455/1-820 VPDVSKLSIP GARAETNYRV SGVDGYETDS IPGLRALGVR DLSY-LVFLA ENSP00000264156/1-821 VPDVSKLSTP GARAETNSRV SGVDGYETEG IRGLRALGVR DLSYRLVFLA ENSBTAP00000048625/1-738 VPDVSKLSTP GARAETDSRV SGVDGYETEG VRGLRALGVR DLSYRLVFLA bmy_10549T0/1-794 VPDVSKLSIP GARAETNYRV SGVDGYETEG IRGLRALGVR DLSYRLVFLA BACU014940/1-821 VPDVSKLSIP GARAETNYRV SGVDGYETEG IRGLRALGVR DLSYRLVFLA 301 350 ENSTTRP00000003455/1-820 CCVAXXXXXF GGKELRDEEQ TAESIKNQMT VKEWEKVFEM SQDKNLYHNL ENSP00000264156/1-821 CCVAPTNPRF GGKELRDEEQ TAESIKNQMT VKEWEKVFEM SQDKNLYHNL ENSBTAP00000048625/1-738 CCVAPTNPRF GGKELRDEEQ TAESIKNQMT VKEWEKVFEM SQDKNLYHNL bmy_10549T0/1-794 CCVAPTNPRF GGKELRDEEQ TAESIKNQMT VKEWEKVFEM SQDKNLYHNL BACU014940/1-821 CCVAPTNPRF GGKELRDEEQ TAESIKNQMT VKEWEKVFEM SQDKNLYHNL 351 400 ENSTTRP00000003455/1-820 CTSLFPTIHG NDEVKRGILL MLFGGVPKTT GEGTSLRGDI NVCIVGDPST ENSP00000264156/1-821 CTSLFPTIHG NDEVKRGVLL MLFGGVPKTT GEGTSLRGDI NVCIVGDPST ENSBTAP00000048625/1-738 CTSLFPTIHG NDEVKRGVLL MLFGGVPKTT GEGTSLRGDI NVCIVGDPST bmy_10549T0/1-794 CTSLFPTIHG NDEVKRGVLL MLFGGVPKTT GEGTSLRGDI NVCIVGDPST BACU014940/1-821 CTSLFPTIHG NDEVKRGVLL MLFGGVPKTT GEGTSLRGDI NVCIVGDPST 401 450 ENSTTRP00000003455/1-820 AKSQFLKHVE EFSPRAVYTS GKASSAAGLT AAVVRDEESH EFVIEAGALM ENSP00000264156/1-821 AKSQFLKHVE EFSPRAVYTS GKASSAAGLT AAVVRDEESH EFVIEAGALM ENSBTAP00000048625/1-738 AKSQFLKHVE EFSPRAVYTS GKASSAAGLT AAVVRDEESH EFVIEAGALM bmy_10549T0/1-794 AKSQFLKHVE EFSPRAVYTS GKASSAAGLT AAVVRDEESH EFVIEAGALM BACU014940/1-821 AKSQFLKHVE EFSPRAVYTS GKASSAAGLT AAVVRDEESH EFVIEAGALM 451 500 ENSTTRP00000003455/1-820 LADNGVCCID EFDKMEVRDQ VAIHEAMEQQ TISITKAGVK ATLNARTSIL ENSP00000264156/1-821 LADNGVCCID EFDKMDVRDQ VAIHEAMEQQ TISITKAGVK ATLNARTSIL ENSBTAP00000048625/1-738 LADNGVCCID EFDKMDVRDQ VAIHEAMEQQ TISITKAGVK ATLNARTSIL bmy_10549T0/1-794 LADNGVCCID EFDKMEVRDQ VAIHEAMEQQ TISITKAGV- ---------- BACU014940/1-821 LADNGVCCID EFDKMEVRDQ VAIHEAMEQQ TISITKAGVK ATLNARTSIL 501 550 ENSTTRP00000003455/1-820 AAANPISGHY DRSKSLKQNI NLSAPIMSRF DLFFILVDEC NEVTDYAIAR ENSP00000264156/1-821 AAANPISGHY DRSKSLKQNI NLSAPIMSRF DLFFILVDEC NEVTDYAIAR ENSBTAP00000048625/1-738 AAANPISGHY DRSKSLKQNI NLSAPIMSRF DLFFILVDEC NEVTDYAIAR bmy_10549T0/1-794 ---------- ------KQNI NLSAPIMSRF DLFFILVDEC NEVTDYAIAR BACU014940/1-821 AAANPIGGHY DRSKSLKQNI NLSAPIMSRF DLFFILVDEC NEVTDYAIAR 551 600 ENSTTRP00000003455/1-820 RIVDLHSRIE ESIDRVYSLD DIRRYLLFAR QFKPKISKES EDFIVEQYKR ENSP00000264156/1-821 RIVDLHSRIE ESIDRVYSLD DIRRYLLFAR QFKPKISKES EDFIVEQYKH ENSBTAP00000048625/1-738 RIVDLHSRIE DSIDRVYSLD EIRRYLLFAR QFKPKISKES EDFIVEQYKR bmy_10549T0/1-794 RIVDLHSRIE DSIDRVYSVD DIRRYLLFAR QFKPKISKES EDFIVEQYKR BACU014940/1-821 RIVDLHSRIE DSIDRVYSVD DIRRYLLFAR QFKPKISKES EDFIVEQYKR 601 650 ENSTTRP00000003455/1-820 LRQRDGSGVT KSSWRITVRQ LESMIRLSEA MARMHCCDEX XXXXXXXXXX ENSP00000264156/1-821 LRQRDGSGVT KSSWRITVRQ LESMIRLSEA MARMHCCDEV QPKHVKEAFR ENSBTAP00000048625/1-738 LRQRDGSGVT KSSWRITVRQ LESMIRLSEA MARMHCCDEV QPKHVKEAFR bmy_10549T0/1-794 LRQRDGSGVT KSSWRITVRQ LESMIRLSEA MARMHCCDEV QPKHVKEAFR BACU014940/1-821 LRQRDGSGVT KSSWRITVRQ LESMIRLSEA MARMHCCDEV QPKHVKEAFR 651 700 ENSTTRP00000003455/1-820 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXHADIP APVNGINGHS ENSP00000264156/1-821 LLNKSIIRVE TPDVNLDQEE EIQMEVDEGA GGINGHADSP APVNGINGYN ENSBTAP00000048625/1-738 LLNKSIIRVE TPDVNLDQEE DAQMEVDEGP DGINGHADSP APASGINGHS bmy_10549T0/1-794 LLNKSIIRVE TPDVNLDQDE DAQMEIDEGP DGIHGRADSP APVNGINGHS BACU014940/1-821 LLNKSIIRVE TPDVNLDQDE DAQMEVDEGP DGIHGRADSP APVNGINGHS 701 750 ENSTTRP00000003455/1-820 EDMNQDAVPK ASLRLGFSEY CRISNLIVLH LRKMEEEEDE SALKRSELVN ENSP00000264156/1-821 EDINQESAPK ASLRLGFSEY CRISNLIVLH LRKVEEEEDE SALKRSELVN ENSBTAP00000048625/1-738 EDMNQDSVPK ASLRLGFSEY CRISNLIVLH LRKMEEGE-- ---------- bmy_10549T0/1-794 EDMNQDSVPK ASLRLGFSEY CRISNLIVLH LRKMEEEEDE SALKRSELVN BACU014940/1-821 EDMNQDSVPK ASLRLGFSEY CRISNLIVLH LRKMEEEEDE SALKRSELVN 751 800 ENSTTRP00000003455/1-820 WYLKEIESEI DSEEELINKK RIIEKVIYRL THYDHVLIEL TQAGLKGSTE ENSP00000264156/1-821 WYLKEIESEI DSEEELINKK RIIEKVIHRL THYDHVLIEL TQAGLKGSTE ENSBTAP00000048625/1-738 ---------- ---------- ---------- ---------- ---------- bmy_10549T0/1-794 WYLKEIESEI DSEEELINKK KIIEKVIYRL THYDHVLIEL TQAGLKGSTE BACU014940/1-821 WYLKEIESEI DSEEELINKK RIIEKVIYRL THYDHVLIEL TQAGLKGSTE 801 850 ENSTTRP00000003455/1-820 GSESYEEDPY LVVNPNYLLE D ENSP00000264156/1-821 GSESYEEDPY LVVNPNYLLE D ENSBTAP00000048625/1-738 ---------- ---------- - bmy_10549T0/1-794 GSESYEEDPY LVVNPNYLLE D BACU014940/1-821 GSESYEEDPY LVVNPNYLLE D