KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:59:21 2014 Check: 00 .. Name: ENSBTAP00000048641/1-334 Len: 339 Check: 7991 Weight: 1.00 Name: ENSP00000359157/1-339 Len: 339 Check: 4274 Weight: 1.00 Name: ENSTTRP00000014510/1-337 Len: 339 Check: 8091 Weight: 1.00 Name: bmy_16165T0/1-220 Len: 339 Check: 3113 Weight: 1.00 Name: BACU020318/1-325 Len: 339 Check: 9070 Weight: 1.00 // 1 50 ENSBTAP00000048641/1-334 MSENVVSTGA VNAVKEVWEK RIKKLNEDLK REKEFQQKLV RIWEERVCLT ENSP00000359157/1-339 MTENVVCTGA VNAVKEVWEK RIKKLNEDLK REKEFQHKLV RIWEERVSLT ENSTTRP00000014510/1-337 MSDNVVCTGA VNAVKEVWEK RIKKYNEDLK REKEFRQKLV RIWEERVSLT bmy_16165T0/1-220 MSENVVCAGA VNSLKEVWEK RIKKYNEDLK REKEFQQKLV GIWEERVSLT BACU020318/1-325 MSENVVCTGA VNSLKEVWEK RIKKYNEDLK REKEFQLKLV GIWEERVSLT 51 100 ENSBTAP00000048641/1-334 KLREKVTKED GRVILKIEKE EWKTLPSSLL KLNQLQEWQL HRIGLLKIPE ENSP00000359157/1-339 KLREKVTRED GRVILKIEKE EWKTLPSSLL KLNQLQEWQL HRTGLLKIPE ENSTTRP00000014510/1-337 KLREKVTRED GRVILKIENE EWKTLPSSLL KLNQLQEWQL HRTGLVKIPE bmy_16165T0/1-220 KLREKVTRED GRVILKIEKE EWKTLPSSLV KLNQLQEWQL HRTGLVKIPE BACU020318/1-325 KLREKVTRED GRVILKIEKE EWKTLPSSLV KLNQLQEWQL HRTGLVKIPE 101 150 ENSBTAP00000048641/1-334 FIGRFQNLIV LDLSRNTITE IPRGIGLLTR LQELILSYNR IKTVPMELSY ENSP00000359157/1-339 FIGRFQNLIV LDLSRNTISE IPPGIGLLTR LQELILSYNK IKTVPKELSN ENSTTRP00000014510/1-337 FIGRFQNLIV LDLSRNTISD IPRGIGLLTR LQELILSYNK IKTVPKELSN bmy_16165T0/1-220 FIGRFQNLIV LDLSRNTISD IPRGIGLLTR LQELILSYNN IKTVPKELSN BACU020318/1-325 FIGRFQNLIV LDLSRNTISD IPRGIGLLTR LQELILSYNN IKTVPKELSN 151 200 ENSBTAP00000048641/1-334 CASLEKLELA VNRDISDLPQ ELSNLLKLTH LDLSMNLFTT IPPAVLNMPA ENSP00000359157/1-339 CASLEKLELA VNRDICDLPQ ELSNLLKLTH LDLSMNDFTT IPLAVLNMPA ENSTTRP00000014510/1-337 CARLEKLELA VNRDICDLPQ ELSNLLKLTH LDLSMNHFTT IPPAVLNMPA bmy_16165T0/1-220 CASLEKLELA VNRDICDLPQ ELSNLLKLTH LDLSMNHFTT IPPAVLNMPA BACU020318/1-325 CASLEKLELA VNRDIRDLPQ ELSNLLKLTH LDLSMNRFTT IPPAVLNMPA 201 250 ENSBTAP00000048641/1-334 LEWLDMGSNR LEQLPDTIER MQNLHTLWLQ RNEITCLPET ISSMKNLSTL ENSP00000359157/1-339 LEWLDMGSNK LEQLPDTIER MQNLHTLWLQ RNEITCLPQT ISNMKNLGTL ENSTTRP00000014510/1-337 LEWLDMGSNR LEQLPDTVER MQSLHTLWLQ RNKITCLPET ISNMKNLGTL bmy_16165T0/1-220 LEWLDMGSNR LEQLPDTIER ---------- ---------- ---------- BACU020318/1-325 LEWLDMGSNR LEQLPDTIER MQSLHTLWLQ RNKITCLPET ISNMKNLGTL 251 300 ENSBTAP00000048641/1-334 VLSNNKLQDI PVCMEKMTNL RFVNFRDNPL KLEVTLPPSE NIEEEEEREL ENSP00000359157/1-339 VLSNNKLQDI PVCMEEMANL RFVNFRDNPL KLKVSLPPSE GTDEEEEREL ENSTTRP00000014510/1-337 VLSNNKLKDI PVCMEEMTNL RFVNFRDNPL KLEVTLPPGE NTDEEEEREL bmy_16165T0/1-220 ---------- ---------- ---------- ---------- ---------- BACU020318/1-325 VLSNNKLKDI PVYMEEMTNL RFVNFRDNPL KLEVTLPPCE SIDEEEEREL 301 350 ENSBTAP00000048641/1-334 FGLQFMHTYI QESRRAGNQV NCSTTSPNSI DADG----- ENSP00000359157/1-339 FGLQFMHTYI QESRRRAALQ FCVCHGQILT IYTCMALEI ENSTTRP00000014510/1-337 FGLQFMHTYI QESRRAAF-- FGVCHGQILI IYTGMALEI bmy_16165T0/1-220 ---------- ---------- ---------- --------- BACU020318/1-325 FGLQFMHTYI QESRRAGMR- FVYNTG---- ---------