KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:59:21 2014 Check: 00 .. Name: ENSP00000355361/1-323 Len: 442 Check: 7529 Weight: 1.00 Name: ENSBTAP00000048646/1-303 Len: 442 Check: 7804 Weight: 1.00 Name: BACU012310/1-434 Len: 442 Check: 7828 Weight: 1.00 Name: bmy_20877T0/1-417 Len: 442 Check: 233 Weight: 1.00 Name: ENSTTRP00000002264/1-305 Len: 442 Check: 9143 Weight: 1.00 // 1 50 ENSP00000355361/1-323 MWPLVAALLL GSACCGSAQL LFNKTKSVEF TFCNDTVVIP CFVTNMEAQN ENSBTAP00000048646/1-303 MWPLVVVLLL GSVRCGSAQL IFNAIKSVEY TLCNQTVVIP CFVNNVETKN BACU012310/1-434 MWPLVVLLLL GSARCGSAQL IFNTTKSVEY TVCNRTVVIP CFVNNMEAKS bmy_20877T0/1-417 MWPLVVLLLL GSARCGSAQL IFNTTKSVEY TVCNQTVVIP CFVNNVEAKS ENSTTRP00000002264/1-305 ---------- ------SAQL IFNTTKSVEY TVCNQTVVIP CFVNNIEAKS 51 100 ENSP00000355361/1-323 TTEVYVKWKF KGRDIYTFDG ALNKSTVPTD FSSAKIEVSQ LLKGDASLKM ENSBTAP00000048646/1-303 ITELYVRWKF KGENIFIFDG SQRMSKPSSN FSSAEIAPSE LLRGIASLKM BACU012310/1-434 IAELYVKWKF KGKDIFIFDG GQQKSKPSDN FTSAKISPSE LLNGIASLTM bmy_20877T0/1-417 IAELYVRWKF KGKDIFIFDG GQQKSKPSDN FASAKISPSE LLNGIASLTM ENSTTRP00000002264/1-305 IAELYVSWKF KGKDIFIFDG VQQKSNSSDI FTSAKISPSE LLKGIASLTM 101 150 ENSP00000355361/1-323 DKSDAVSHTG NYTCEVTELT REGETIIELK YRVVSWFSPN ENILIVIFPI ENSBTAP00000048646/1-303 AKSDAVL--G NYTCEVTELS REGETIIELK YRVVSWFSPN ENILIVIFPV BACU012310/1-434 DKRDAVL--G NYTCEVTELS REGETIVELK YRVVSWFSPN ENILTVIFPI bmy_20877T0/1-417 DKLDAVL--G NYTCEVTELS REGETIVELK YRVVSWFSPN ENILTVIFPI ENSTTRP00000002264/1-305 DKREAVL--G NYTCEVTELS REGETIVELK YRVVSWFSPN ENILTVIFPI 151 200 ENSP00000355361/1-323 FAILLFWGQF GIKTLKYRSG GMDEKTIALL VAGLVITVIV IVGAILFVPG ENSBTAP00000048646/1-303 LAILLFWGQF GIVTLKYKSN YTKEKAIFLL VAGLLLTVLV IVGAFLFIPG BACU012310/1-434 LAILLFWGQF GVVTLKYKSS YTKEKTIFLL VTGLVLTIVV IVGAILFIPG bmy_20877T0/1-417 LAILLFWGQF GVVTLKYKSS YTKEKTIFLL VTGLVLTIVV IVGAILFIPG ENSTTRP00000002264/1-305 LAILLFWGQF GVVTLKYKSS YTKEKTIFLL VTGLVLTIVV IVGAILFIPG 201 250 ENSP00000355361/1-323 EYSLKNATGL GLIVTSTGIL ILLHYYVFST AIGLTSFVIA ILVIQVIAYI ENSBTAP00000048646/1-303 EYSTKNASGL GLIVLPTIIL ILLHYCVFMI AMGMSSFTIS ILILQLLGYV BACU012310/1-434 EYSTKNACGL GLIVIPTAIL ILLQYYVFMI TMGMSFFTIA ILILQVLGHV bmy_20877T0/1-417 EYSTKNACGL GLIVIPTAIL ILLQYYVFMI TMGVSFFTIA ILILQVLGHV ENSTTRP00000002264/1-305 EYSTKNACGL GLIVIPTAIL ILLQYCVFMI AVGMSFFTIA ILILQVLGHV 251 300 ENSP00000355361/1-323 LAVVGLSLCI AACIPMHGPL LISGLSILAL AQLLGLVYMK FV-------- ENSBTAP00000048646/1-303 LSVVGFSLCV SECIPVHGPL LISGLGIIAL AELLGLVYMK CV-------- BACU012310/1-434 LSVVGFSLCV SECTPVHGPL LISGLGIIAL AELLGLVYMK CVEINFDERR bmy_20877T0/1-417 LSVVGFSLCV SECTPVHGPL LISGLGIIAL AKLLGLVYMK CVD------- ENSTTRP00000002264/1-305 LSVVGFSLCV SECTPVHGPL LISGLGILAL AELLGLVYMK CV-------- 301 350 ENSP00000355361/1-323 ---------- ---------- ---------- ---------- ---------A ENSBTAP00000048646/1-303 ---------- ---------- ---------- ---------- ---------A BACU012310/1-434 GKAVGLEKDA NSYSLLRKSQ RLRVMAERLT AIPDPPSPEF REEQYGKWRS bmy_20877T0/1-417 ----GTAAAV APYEYLRTVR DLQVQRN--- --------TF GQLKGKKRKA ENSTTRP00000002264/1-305 ---------- ---------- ---------- ---------- ---------A 351 400 ENSP00000355361/1-323 SNQKTIQPP- RKAVEEPLNA FKESKGMMND E--------- ---------- ENSBTAP00000048646/1-303 SNHRTIQPP- KSN------- ---------- ---------- ---------- BACU012310/1-434 HRHSGKQPGG RAELLETLTG SKAAAGTRVA TINVPLCHQS FLALSTSLLQ bmy_20877T0/1-417 SNHKTIQPP- RKAVEEPLNA FKESKGMMND EINFDERRGK AVGLEKDPNS ENSTTRP00000002264/1-305 SNHKTIQPP- RRTILKLLFA FKESKGMMND E--------- ---------- 401 450 ENSP00000355361/1-323 ---------- ---------- ---------- ---------- -- ENSBTAP00000048646/1-303 ---------- ---------- ---------- ---------- -- BACU012310/1-434 YRLASLCFTL QMSVGKTGIR MPNTSSKHFQ TFLVTV---- -- bmy_20877T0/1-417 YSLLRKSQSV DCAFLIRNLH QDENLGPVSH LAWGSRRADL ND ENSTTRP00000002264/1-305 ---------- ---------- ---------- ---------- --