KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:59:22 2014 Check: 00 .. Name: ENSP00000460850/1-413 Len: 656 Check: 4588 Weight: 1.00 Name: ENSBTAP00000048673/1-431 Len: 656 Check: 4808 Weight: 1.00 Name: ENSTTRP00000016100/1-412 Len: 656 Check: 9109 Weight: 1.00 Name: BACU009168/1-595 Len: 656 Check: 3423 Weight: 1.00 Name: bmy_02773T0/1-465 Len: 656 Check: 8252 Weight: 1.00 // 1 50 ENSP00000460850/1-413 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000048673/1-431 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000016100/1-412 ---------- ---------- ---------- ---------- ---------- BACU009168/1-595 MTEVVPSSSL SEVSLRLLCH DDIDTVKHLC GDWFPIDYPD SWYRDITSNK bmy_02773T0/1-465 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000460850/1-413 ---------- ---------- ---------- ------MSF- ---------- ENSBTAP00000048673/1-431 ---------- ---------- ---------- ------MSF- ---------- ENSTTRP00000016100/1-412 ---------- ---------- ---------- ------MSF- ---------- BACU009168/1-595 KFFSLAATYR GAIVGMIVAE IKSRTKIHKE DGDILASSFS VDTQVAYILS bmy_02773T0/1-465 ---------- ---------- ---------- ------MSF- ---------- 101 150 ENSP00000460850/1-413 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000048673/1-431 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000016100/1-412 ---------- ---------- ---------- ---------- ---------- BACU009168/1-595 LGVVKEFRKH GIGSLLLESL KDHISTTAQD HCKAIYLHVL TTNNTAINFY bmy_02773T0/1-465 ---------- ---------- ---------- ---------- ---------- 151 200 ENSP00000460850/1-413 --RDLR---- ---------- ---------- ---------- -------NFT ENSBTAP00000048673/1-431 --RDLR---- ---------- ---------- ---------- -------NFT ENSTTRP00000016100/1-412 --RDLR---- ---------- ---------- ---------- -------NFT BACU009168/1-595 ENRDFKQHHY LPYYYSIRGV LKDGFTYVLY INGGHPPWTI LYPFSFGDFT bmy_02773T0/1-465 --RDLR---- ---------- ---------- ---------- -------NFT 201 250 ENSP00000460850/1-413 EMMRALGYPR HISMENFRTP NFGLVSEVLL WLVKRYEPQT DIPPDVDTEQ ENSBTAP00000048673/1-431 EMMRALGYPR HISMENFRTP NFGLVSEVLL WLVKRYEPQN DIPSDVETEQ ENSTTRP00000016100/1-412 EMMRALGYPR HISMENFRTP NFGLVSEVLL WLVKRYEPQT DIPSDVETEQ BACU009168/1-595 EMMRALGYPR HISMENFRTP NFGLVSEVLL WLVKRYEPQT DIPSDVETEQ bmy_02773T0/1-465 EMMRALGYPR HISMENFRTP NFGLVSEVLL WLVKRYEPQT DIPSDVETEQ 251 300 ENSP00000460850/1-413 DRVFFIKAIA QFMATKAHIK LNTKKLYQAD GYAVKELLKI TSVLYNAMKT ENSBTAP00000048673/1-431 DRVFFIKAIA QFMATKAHIK LNTKKLYQAD GYAVKELLKI TSVLYNAMKT ENSTTRP00000016100/1-412 DRVFFIKAIA QFMATKAHIK LNTKKLYQAD GYAVKELLKI TSVLYNAMKT BACU009168/1-595 DRVFFIKAIA QFMATKAHIK LNTKKLYQAD GYAVKELLKI TSVLYNAMKT bmy_02773T0/1-465 DRVFFIKAIA QFMATKAHIK LNTKKLYQAD GYAVKELLKI TSVLYNAMKT 301 350 ENSP00000460850/1-413 KGMEGSEIVE EDVNKFKFDL GSK------- ---------- ---------- ENSBTAP00000048673/1-431 KGMEGSKRAE EDVSKFKFDL GSK------- ---------- ---------- ENSTTRP00000016100/1-412 KGMEDSKIGE EDISKFKFDL SSK------- ---------- ---------- BACU009168/1-595 KGMEDSKIGE EDISKFKFDL SSK------- ---------- ---------- bmy_02773T0/1-465 KGMEDSKIGE EDISKFKFDL SSKVRTMQDQ CFLNWCSGNS LLQDVNMCLV 351 400 ENSP00000460850/1-413 -------IAD LKAARQLASE ITSKGASLYD LLGMEVELRE MRTEAIARPL ENSBTAP00000048673/1-431 -------IAD LKAARQLASE ITSKGASLYD LLGKEVELRE LRTEAVARPL ENSTTRP00000016100/1-412 -------IAD LKAARQLASE ITSKGASLYD LLGKEVELRX XXXXXXXXXX BACU009168/1-595 -------IAD LKAARQLASE ITSKGASLYD LLGKEVELRE LRTEAIARPL bmy_02773T0/1-465 ENVFYSQIAD LKAARQLASE ITSKGASLYD LLGKEVELRE LRTEAIARPL 401 450 ENSP00000460850/1-413 EINETEKVMR IAIKEILTQV QKTKDLLNNV ASDEANLEAK IEKRKLELER ENSBTAP00000048673/1-431 EINETEKVMR IAIKDILAQV QKTKDLLNNV ASDEANLEAK IEKRKLELER ENSTTRP00000016100/1-412 XXXXXXXXXX XXXXXXXVQV QKTKDLLNNV ASDEANLEAK IDKRKLELER BACU009168/1-595 EINETEKVMR IAIKDILVQV QKTKDLLNNV ASDEANLEAK IDKRKLELER bmy_02773T0/1-465 EINETEKVMR IAIKDILVQV QKTKDLLNNV ASDEANLEAK IDKRKLELER 451 500 ENSP00000460850/1-413 NRKRLETLQS VRPCFMDEYE KTEEELQKQY DTYLEKFQNL TYLEQQLEDH ENSBTAP00000048673/1-431 NRKRLQTLQS VRPAFMDEYE KIEEELQKQY EIYLEKFRNL AYLEQQLEDH ENSTTRP00000016100/1-412 NRKRLQTLQS VRPAFMDEYE KTEDELQKQY DIYLEKFRNL AYLEQQLEDH BACU009168/1-595 NRKRLQTLQS VRPAFMDEYE KTEDELQKQY DIYLEKFRNL AYLEQQLEDH bmy_02773T0/1-465 NRKRLQTLQS VRPAFMDEYE KTEDELQKHY DIYLEKFRNL AYLEQQLEDH 501 550 ENSP00000460850/1-413 HRMEQERFEE AKNTLCLIQN KLKEEEKRLL KSGSNDDSDI DIQEDDESDS ENSBTAP00000048673/1-431 HRMEQERFEE TENTLRLMQN KLKEEGKRLL KSGSNGDSDV DIQEDDESDS ENSTTRP00000016100/1-412 HRMEQERFEE AENTLRLMQN KLKEEEKRLL KSRSNDDSDI DIQEDDESDS BACU009168/1-595 HRIEQERFEP GLQGCQIFGS RLSPE----- --FGNDDSDI DIQEDDESDS bmy_02773T0/1-465 HRMEQERFEE AENTLRLMQN KLKEEEKRLL KSRSNDDSDI DIQEDDESDS 551 600 ENSP00000460850/1-413 ELEERRLPKP QTAMEMLMQG RPGKRIVGTM QGGDSDDN-- ---------- ENSBTAP00000048673/1-431 ELEERRLSQL RTAMEVLTQG QPSKHVVGTM QGGDTDDDME AAPAFLGKCK ENSTTRP00000016100/1-412 ELEERRLSKP RTAMEALLQG RPSKRVVGTM QGGDSDDD-- ---------- BACU009168/1-595 ELEERRLSKP RTAMEALLQG RPSKRVVGTM QGGDSDDD-- ---------- bmy_02773T0/1-465 ELEERRLSKP RTAMEALLQG RPSKRVVGTM QGGDSDNEME AAPALLGKCK 601 650 ENSP00000460850/1-413 -------EDS EESEIDMEDD DDEDDDLEDE SISLSPTKPN RRVRKSEPLD ENSBTAP00000048673/1-431 TSSSKKQEDL EDSEIDMEDD ED-DDDLEDE SVALSAAKPS RRGRKPEPLE ENSTTRP00000016100/1-412 -------EDS EDSEIDMEDD ED-DDDLEDE SIALSPAKPS QRVRKPEPLD BACU009168/1-595 -------EDS EDSEIDMEDD ED-DDDLEDE SIALSPAKPS QRVRKPEPLD bmy_02773T0/1-465 TSSSKKQEDS EDSEIDMEDD ED-DDDLEDE SIALSPAKPS QRVRKPEPLD 651 700 ENSP00000460850/1-413 ESDNDF ENSBTAP00000048673/1-431 ESDSDF ENSTTRP00000016100/1-412 ESDNDF BACU009168/1-595 ESDNDF bmy_02773T0/1-465 ESDNDF