KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:59:23 2014 Check: 00 .. Name: ENSBTAP00000048722/1-660 Len: 660 Check: 1135 Weight: 1.00 Name: ENSP00000180173/1-660 Len: 660 Check: 2938 Weight: 1.00 Name: ENSTTRP00000011924/1-652 Len: 660 Check: 6675 Weight: 1.00 Name: BACU005187/1-605 Len: 660 Check: 9885 Weight: 1.00 Name: bmy_00271T0/1-364 Len: 660 Check: 1030 Weight: 1.00 // 1 50 ENSBTAP00000048722/1-660 MEHIRTPKVE NVRLVDRISS KKAALGTLYL TATHVIFVET APDTRKETWI ENSP00000180173/1-660 MEHIRTPKVE NVRLVDRVSP KKAALGTLYL TATHVIFVEN SPDPRKETWI ENSTTRP00000011924/1-652 --------VE NVRLVDRISS KKAALGTLYL TATHVIFVEN APDTRKETWI BACU005187/1-605 --------VE NVRLVDGISS KKAALGTLYL TATHVIFVEN APDTRKETWI bmy_00271T0/1-364 ---------- ---------- ---------- ---------- ---------- 51 100 ENSBTAP00000048722/1-660 LHSQIATIEK QATTATGCPL LIRCKNFQLL QLIIPQERDC HDVYISLIRL ENSP00000180173/1-660 LHSQISTIEK QATTATGCPL LIRCKNFQII QLIIPQERDC HDVYISLIRL ENSTTRP00000011924/1-652 LHSQISTIEK QATTATGCPL LIRCKNFQLL QLIIPQERDC HDVYISLIRL BACU005187/1-605 LHSQISTIEK QATTATGCPL LVRCKNFQLL QLVIPQERDC HDVYISLLRL bmy_00271T0/1-364 ---------- ---------- ---------- ---------- ---------- 101 150 ENSBTAP00000048722/1-660 ARPVKYEELY CFSFNPKLDR EEREQGWMLI ELSEEYKRMG LPNEYWQLSD ENSP00000180173/1-660 ARPVKYEELY CFSFNPMLDK EEREQGWVLI DLSEEYTRMG LPNHYWQLSD ENSTTRP00000011924/1-652 ARPVKYEELY CFSFNPKLDR EEREQGWMLI DLSEEYQRMG LPNNYWQLSD BACU005187/1-605 ARPVKYEELY CFSFNPKLDR EEREQGWMLI DLSEEYKRMG LPNNYWQLSD bmy_00271T0/1-364 ---------- ---------- ---------- ---------- ---------- 151 200 ENSBTAP00000048722/1-660 VNREYRICDS YPTELYVPKS ATAHIIVGSS KFRSRRRFPA LSYYYKDNHA ENSP00000180173/1-660 VNRDYRVCDS YPTELYVPKS ATAHIIVGSS KFRSRRRFPV LSYYYKDNHA ENSTTRP00000011924/1-652 VNRDYRVCDS YPTELYVPRT ATAHIIVGSS KFRSRRRFPV LSYYHKDNHV BACU005187/1-605 VNRDYRVCDS YPTQLYVPKS ATAPIIVGSS KFRSRRRFPA LSYYYKDNHV bmy_00271T0/1-364 ---------- ---------- ---------- ---------- ---------- 201 250 ENSBTAP00000048722/1-660 SICRSSQPLS GFSARCLEDE QMLQAIRKAN PGSDFLYVVD TRPKLNAMAN ENSP00000180173/1-660 SICRSSQPLS GFSARCLEDE QMLQAIRKAN PGSDFVYVVD TRPKLNAMAN ENSTTRP00000011924/1-652 SICRSSQPLS GFSARCLEDE QMLQAIRKAS PGSDFIYVVD TRPKLNAMAN BACU005187/1-605 SICRSSQPLS GFSARCLEDE QMLQAIRKAS PGSDFIYVVD TRPKLNAMAN bmy_00271T0/1-364 ---------- ---------- ---------- ---------- ---------- 251 300 ENSBTAP00000048722/1-660 RAAGKGYENE DNYSNIKFQF IGIENIHVMR NSLQKMLEVC ELKSPSMSDF ENSP00000180173/1-660 RAAGKGYENE DNYSNIKFQF IGIENIHVMR NSLQKMLEVC ELKSPSMSDF ENSTTRP00000011924/1-652 RAAGKGYENE DNYSNIKFQF IGIENIHVMR NSLQKMLEVC ELKSPSMSDF BACU005187/1-605 RAAGKGYENE DNYSNIKFQF IGIENIHVMR NSLQKMLEVC ELKSPSMSDF bmy_00271T0/1-364 ---------- ---------- ---------- ---------- ------MSDF 301 350 ENSBTAP00000048722/1-660 LWGLENSGWL RHIKAIMDAG IFIAKAVSEE GASVLVHCSD GWDRTAQVCS ENSP00000180173/1-660 LWGLENSGWL RHIKAIMDAG IFIAKAVSEE GASVLVHCSD GWDRTAQVCS ENSTTRP00000011924/1-652 LWGLENSGWL RHIKAIMDAG IFIAKAVSEE GASVLVHCSD GWDRTAQVCS BACU005187/1-605 LWGLENSGWL RHIKAIMDAG IFIAKAVSEE GASVLVHCSD GWDRTAQVCS bmy_00271T0/1-364 LWGLENSGWL RHIKAIMDAG IFIAKAVSEE GASVLVHCSD GWDRTAQVCS 351 400 ENSBTAP00000048722/1-660 VASLLLEPHY RTLKGFMVLI EKDWISFGHK FTHRYGNLDG DPREISPVID ENSP00000180173/1-660 VASLLLDPHY RTLKGFMVLI EKDWISFGHK FNHRYGNLDG DPKEISPVID ENSTTRP00000011924/1-652 VASLLLDPHY RTLKGFMVLI EKDWISFGHK FNHRYGNLDG DPKEISPVID BACU005187/1-605 VASLLLDPHY RTLKGFMVLI EKDWISFGHK FNHRYGNLDG DPREISPVID bmy_00271T0/1-364 VASLLLDPHY RTLKGFMVLI EKDWISFGHK FNHRYGNLDG DPREISPVID 401 450 ENSBTAP00000048722/1-660 QFLECVWQLM EQFPCAFEFN ERFLIHIQHH IYSCQFGNFL CNSQKERQEL ENSP00000180173/1-660 QFIECVWQLM EQFPCAFEFN ERFLIHIQHH IYSCQFGNFL CNSQKERREL ENSTTRP00000011924/1-652 QFIECVWQLM EQFPCAFEFN ERFLIHIQHH IYSCQFGNFL CNSQKERQEL BACU005187/1-605 QFIECVWQLM EQFPCAFEFN ERFLIHIQHH IYSCQFGNFL CNSQKERQEL bmy_00271T0/1-364 QFIECVWQLM EQFPCAFEFN ERFLIHIQHH IYSCQFGNFL CNSQKERQEL 451 500 ENSBTAP00000048722/1-660 KIQERTYSLW AHLWKNRADY LNPLFRADHS QTRGVLHLPT APCNFMYKFW ENSP00000180173/1-660 KIQERTYSLW AHLWKNRADY LNPLFRADHS QTQGTLHLPT TPCNFMYKFW ENSTTRP00000011924/1-652 KIQERTYSLW AHLWKNRGDY LNPLFRDDPS QTQGTLHLPT TPCNFMYKFW BACU005187/1-605 ---------- ---------- ---------- ---------- -------KFW bmy_00271T0/1-364 KIQERTYSLW AHLWKNRGDY LNPLFRGDPS QTQGTLRLPT TPCNFMYKFW 501 550 ENSBTAP00000048722/1-660 NGMYNRFEKG LQPRQSVTDY LMAVKEETQQ LEEELEALEE RLEKIQKVQL ENSP00000180173/1-660 SGMYNRFEKG MQPRQSVTDY LMAVKEETQQ LEEELEALEE RLEKIQKVQL ENSTTRP00000011924/1-652 SGMYNRFEKG LQPRQSVTDY LMAVKEETQQ LEEELEALEE RLEKIQKVQL BACU005187/1-605 SGMYNRFEKG LQPRQSVTDY LMAVKEETQQ LEEELEALEE RLERIQKVQL bmy_00271T0/1-364 SGMYNRFEKG LQPRQSVTDY LMAVKEETQQ LEEELEALEE RLERIQKVQL 551 600 ENSBTAP00000048722/1-660 NRTKVRSKQS EPSKHSGFST SDNSAANTPQ DYSGNVKSFP SRSPSQGDED ENSP00000180173/1-660 NCTKVKSKQS EPSKHSGFST SDNSIANTPQ DYSGNMKSFP SRSPSQGDED ENSTTRP00000011924/1-652 NRTQVKSKQS EPSRHSGFST SDNSTANTPQ DYSGNMKSFP SRSPSQGDED BACU005187/1-605 NRTQVKSKQS EPSKHSGFST SDNSTANTPQ DYSGNMKSFP SRSPSQGDED bmy_00271T0/1-364 NRTQVKSKQS EPSKHSGFST SDNSTANTPQ DYSGNMKSFP SRSPSQGDED 601 650 ENSBTAP00000048722/1-660 SALILTQDNL KSSDPDLSAN SDQESGVEDL SCRSPSGGEC VPSEDSGKDR ENSP00000180173/1-660 SALILTQDNL KSSDPDLSAN SDQESGVEDL SCRSPSGGEH APSEDSGKDR ENSTTRP00000011924/1-652 SALILTQDNL KSSDPDLSAN SDQESGVEDL SCRSPSGGEC VPSEDSGKDR BACU005187/1-605 SALILTQDNL KSSDPDLSAN SDQESGVEDL SCRSPSGGEC APGEDSGKDR bmy_00271T0/1-364 SALILTQDNL KSSDLDLSAN SDQESGVEDL SCRSPSGGEC VPGEDSGKDR 651 700 ENSBTAP00000048722/1-660 DSDEAVFLTA ENSP00000180173/1-660 DSDEAVFLTA ENSTTRP00000011924/1-652 DSDEAVFLTA BACU005187/1-605 DSDEAVFLTA bmy_00271T0/1-364 DSDEAVFLTA