KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:59:23 2014 Check: 00 .. Name: bmy_11950T0/1-386 Len: 608 Check: 736 Weight: 1.00 Name: BACU013784/1-487 Len: 608 Check: 5700 Weight: 1.00 Name: ENSTTRP00000006194/1-576 Len: 608 Check: 521 Weight: 1.00 Name: ENSP00000365811/1-509 Len: 608 Check: 8615 Weight: 1.00 Name: ENSBTAP00000048763/1-509 Len: 608 Check: 7437 Weight: 1.00 // 1 50 bmy_11950T0/1-386 ---------- ---------- ---------- ---------- ---------- BACU013784/1-487 ---------- ---------- --MVAELATR PQNIETLQNA G--------- ENSTTRP00000006194/1-576 MSQRQVLQVF EQYQKARTQF VQMVAELATR PQNIETLQNA GEPSPRTRVA ENSP00000365811/1-509 MSQRQVLQVF EQYQKARTQF VQMVAELATR PQNIETLQNA G--------- ENSBTAP00000048763/1-509 MSQRQVLQVF EQYQKARTQF VQMVAELATR PQNIETLQNA G--------- 51 100 bmy_11950T0/1-386 ---------- ---------- ---------- ---------- ---------- BACU013784/1-487 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000006194/1-576 PLTPYPRPLR PAPQPAELLG SGRMGTGGCR SVRSLRVKFP DWCERDPTSL ENSP00000365811/1-509 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000048763/1-509 ---------- ---------- ---------- ---------- ---------- 101 150 bmy_11950T0/1-386 ---------- ---------- MSTMRVESLL FLGTQVNQHG E--KWLVQGS BACU013784/1-487 --------VM SLLRPLLLDV VPTIQQTAAL ALGRLANYND DLAEAVVKGN ENSTTRP00000006194/1-576 FPSLSQPSVM SLLRPLLLDV VPTIQQTAAL ALGRLANYND DLAEAVVKGN ENSP00000365811/1-509 --------VM SLLRTLLLDV VPTIQQTAAL ALGRLANYND DLAEAVVKCD ENSBTAP00000048763/1-509 --------VM ALLRPLLLDV VPTIQQTAAL ALGRLANYND DLAEAVVKGD 151 200 bmy_11950T0/1-386 V--------- --------TH THLITFLGP- ---------- ---------- BACU013784/1-487 ILPQLVYSLA EQNRFYKKAA AFVLRAVGKH SPQLAQAIVD CGALDTLVIC ENSTTRP00000006194/1-576 ILPQLVYSLA EQNRFYKKAA AFVLRAVGKH SPQLAQAIVD CGALDTLVIC ENSP00000365811/1-509 ILPQLVYSLA EQNRFYKKAA AFVLRAVGKH SPQLAQAIVD CGALDTLVIC ENSBTAP00000048763/1-509 ILPQLVYSLA EQNRFYKKAA AFVLRAVGKH SPQLAQAIVD CGALDTLVIC 201 250 bmy_11950T0/1-386 ---------- ---------- ---TELSQAV VDAGAIPLLV LCIQEPEIAL BACU013784/1-487 LEDFDPGVKE AAVWALGYIA RHNAELSQAV VDAGAIPLLV LCIQEPEIAL ENSTTRP00000006194/1-576 LEDFDPGVKE AAAWALGYIA RHNAELSQAV VDAGAIPLLV LCIQEPEIAL ENSP00000365811/1-509 LEDFDPGVKE AAAWALRYIA RHNAELSQAV VDAGAVPLLV LCIQEPEIAL ENSBTAP00000048763/1-509 LEDFDPGVKE AAAWALGYIA RHNAELSQAV VDAGAVPLLV LCIQEPEIAL 251 300 bmy_11950T0/1-386 KRIAASALSD IAKHSPELAQ TVVDAGAIAH LAQMILNPDA KLKRQVLSAL BACU013784/1-487 KRIAASALSD IAKHSPELAQ TVVDAGAIAH LAQMILNPDA KLKRQVLSAL ENSTTRP00000006194/1-576 KRVAASALSD IAKHSPELAQ TVVDAGAIAH LAQMILNPDA KLKRQILSAL ENSP00000365811/1-509 KRIAASALSD IAKHSPELAQ TVVDAGAVAH LAQMILNPDA KLKHQILSAL ENSBTAP00000048763/1-509 KRIAVSALSD IAKHSPELAQ TVVDAGVIAH LAQMILNPDA KLKRQVLSAL 301 350 bmy_11950T0/1-386 SQIAKHSVDL AEMVVEAEIF PAVLTCLKDK DEYVKKNAST LIREIAKHTP BACU013784/1-487 SQIAKHSVDL AEMVVEAEIF PAVLTCLKDK DEYVKKNAST LIREIGKHTP ENSTTRP00000006194/1-576 SQIAKHSVDL AEMVVEAEIF PAVLTCLKDK DEYVKKNAST LIREIAKHTP ENSP00000365811/1-509 SQVSKHSVDL AEMVVEAEIF PVVLTCLKDK DEYVKKNAST LIREIAKHTP ENSBTAP00000048763/1-509 SQIAKHSVDL AEMVVEAEIF PVVLTCLKDK DEYVKKNAST LIREIAKHTP 351 400 bmy_11950T0/1-386 ELSQLIVNTG GVAAMIDCIG SCKGNIRLPG IMMLGYVAAH SENLAMAVII BACU013784/1-487 ELSQLIVNTG GVAAMIDCIG SCKGNIRLPG IMMLGYVAAH SENLAMAVII ENSTTRP00000006194/1-576 ELSQLIVNTG GVAAVIDCIG SCKGNIKLPG IMMLGYVAAH SENLAMAVII ENSP00000365811/1-509 ELSQLVVNAG GVAAVIDCIG SCKGNTRLPG IMMLGYVAAH SENLAMAVII ENSBTAP00000048763/1-509 ELSQLIVNAG GVAAVIDCIG SCKGNIRLPG IMLLGYVAAH SENLAMAVII 401 450 bmy_11950T0/1-386 SKGVPQLSVC LSEEPEDHIK AAAAWALGQI GSHTPEHAWA VAVTNTLPVL BACU013784/1-487 SKGVPQLSVC LSEEPEDHIK AAAAWALGQI GRHTPEHARA VAVTHTLPVL ENSTTRP00000006194/1-576 SKGVPQLSVC LSEEPEDHIK AAAAWALGQI GRHTPEHARA VAVTNTLPVL ENSP00000365811/1-509 SKGVPQLSVC LSEEPEDHIK AAAAWALGQI GRHTPEHARA VAVTNTLPVL ENSBTAP00000048763/1-509 SKGVPQLSLC LSEEPEDHIK AAAAWALGHI GRHTPEHARA VAVTNTLPVL 451 500 bmy_11950T0/1-386 LSLYMSTESS EDLQV----- ---------- ---------- ---------- BACU013784/1-487 LSLYMSTESS EDLQVKSKKA IKNILQKCTH LPALEPLLHD APPNILKYVV ENSTTRP00000006194/1-576 LSLYMSTESS EDLQMKSKKA IKNILQKCTY LPALEPFLYD APPNILKYVV ENSP00000365811/1-509 LSLYMSTESS EDLQVKSKKA IKNILQKCTY LPALEPFLYD APPNILKHVV ENSBTAP00000048763/1-509 LSLYMSTESS EDLQVKSKKA IKNILQKCTY LPALEPFLYD APPNILKHVV 501 550 bmy_11950T0/1-386 ----KVLPHD SKARRLFVTS GGLKKIQEIK AEPGSLLQEY INSINNCYPE BACU013784/1-487 GQFSKVLPHD SKARRLFVTS GGLKKIQEIK AEPGSLLQEY INSINNCYPE ENSTTRP00000006194/1-576 GQFSKVLPHD SKARRLFVTS GGLKRIQEIK AEPGSLLQEY INSINNCYPE ENSP00000365811/1-509 GQFSKVLPHD SKARRLFVTS GGLKKVQEIK AEPGSLLQEY INSINSCYPE ENSBTAP00000048763/1-509 GQFSKVLPHD SKARRLFVTS GGLKKVQEIK AEPGSLLQEY INSINNCYPE 551 600 bmy_11950T0/1-386 EIMLHSIIPL DIQIYFCREW TAINHLLTEQ SYIFILEFTA DNAKKNCFAK BACU013784/1-487 EIVR------ ----YYSPGY SDI------- ----LLQ--- ---RVDSYQP ENSTTRP00000006194/1-576 EIVR------ ----YYSPGY SDI------- ----LLQ--- ---RVDSYQP ENSP00000365811/1-509 EIVR------ ----YYSPGY SDT------- ----LLQ--- ---RVDSYQP ENSBTAP00000048763/1-509 EIVR------ ----YYSPGY SET------- ----LLQ--- ---RVDSYQP 601 650 bmy_11950T0/1-386 HSGTEDVP BACU013784/1-487 LTN----- ENSTTRP00000006194/1-576 FTN----- ENSP00000365811/1-509 LNN----- ENSBTAP00000048763/1-509 LTN-----